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D

Diego A. Oyarzún

University of Edinburgh

28H-index
138Paper Count
2.9KCitation Count
Published Papers 41
Publication Date
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A comprehensive pharmacological survey across heterogeneous patient-derived glioblastoma stem cell models
erriScience
IF4.1
err2026-04-27
err0
errOAAI
errRichard J.R. Elliott; Peter W.K. Nagle; Muhammad Furqan; John C. Dawson; Vanessa Smer-Barreto; Diego A. Oyarzún; Aoife McCarthy; Alison F. Munro; Camilla Drake; Gillian M. Morrison; Steven M. Pollard; Michael Marand; Daniel Ebner; Valerie G. Brunton; Margaret C. Frame; Neil O. Carragher
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errSave
Signatures of Electron–Hole Hopping in Myoglobin Peroxidase Activity Revealed by Deep Mutational Learning
errACS Catalysis
IF13.1
err2026-03-13
err0
PREAI
errChristoph Küng; Alperen Dalkıran; Rosario Vanella; Diego A. Oyarzún; Michael A. Nash
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errSave
Optimization of regulatory DNA with active learning
errComputational and Structural Biotechnology Journal
IF4.1
err2025-10-04
err0
errOAAI
errYuxin Shen; Grzegorz Kudla; Diego A. Oyarzún
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errSave
Modeling host–pathway dynamics at the genome scale with machine learning
errMetabolic Engineering
IF6.8
err2025-06-17
err0
errOAAI
errCharlotte Merzbacher; Oisin Mac Aodha; Diego A. Oyarzún
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errSave
Can protein expression be ‘solved’?
errTrends in Biotechnology
IF14.9
err2025-06-02
err0
errOAAI
errCatherine Baranowski; Hector Garcia Martin; Diego A. Oyarzún; Aviv Spinner; Bijoy Desai; Christopher J. Petzold; Evangelos-Marios Nikolados; Sebastian Jaaks-Kraatz; Aljaž Gaber; Robert J. Chalkley; Devin Scannell; Rachel Sevey; Michael C. Jewett; Peter J. Kelly; Erika A. DeBenedictis
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errSave
Tuning ProteinMPNN to reduce protein visibility via MHC Class I through direct preference optimization
errPROTEIN ENGINEERING DESIGN & SELECTION
IF3.4
err2025-03-18
err0
PREAI
errGasser, Hans-Christof; Oyarzun, Diego A.; Alfaro, Javier Antonio; Rajan, Ajitha
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errSave
Multiscale modelling of bioprocess dynamics and cellular growth
errMICROBIAL CELL FACTORIES
IF4.9
err2024-11-22
err1
errOAAI
errMahnert, Camilo; Oyarzun, Diego A.; Berrios, Julio
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errSave
A call for caution when using network methods to study multimorbidity: an illustration using data from the Canadian Longitudinal Study on Aging
errJOURNAL OF CLINICAL EPIDEMIOLOGY
IF5.2
err2024-08-01
err0
PREAI
errGriffith, Lauren E.; Brini, Alberto; Muniz-Terrera, Graciela; St John, Philip D.; Stirland, Lucy E.; Mayhew, Alexandra; Oyarzun, Diego; van den Heuvel, Edwin
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errSave
Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality
errNPJ SYSTEMS BIOLOGY AND APPLICATIONS
IF3.5
err2024-03-06
err6
errOAAI
errHasibi, Ramin; Michoel, Tom; Oyarzun, Diego A.
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errSave
Applications of artificial intelligence and machine learning in dynamic pathway engineering
errBIOCHEMICAL SOCIETY TRANSACTIONS
IF4.3
err2023-09-01
err8
errOAAI
errMerzbacher, Charlotte; Oyarzun, Diego A.
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errSave
Bayesian Optimization for Design of Multiscale Biological Circuits
errACS SYNTHETIC BIOLOGY
IF3.9
err2023-06-20
err5
errOAAI
errMerzbacher, Charlotte; Mac Aodha, Oisin; Oyarzun, Diego A.
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errSave
Discovery of senolytics using machine learning
errNATURE COMMUNICATIONS
IF15.7
err2023-06-10
err26
errOAAI
errSmer-Barreto, Vanessa; Quintanilla, Andrea; Elliott, Richard J. R.; Dawson, John C.; Sun, Jiugeng; Campa, Victor M.; Lorente-Macias, Alvaro; Unciti-Broceta, Asier; Carragher, Neil O.; Acosta, Juan Carlos; Oyarzun, Diego A.
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errSave
Deep learning for optimization of protein expression
errCURRENT OPINION IN BIOTECHNOLOGY
IF7
err2023-06-01
err9
errOAAI
errNikolados, Evangelos-Marios; Oyarzun, Diego A.
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errSave
P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri
errACS SYNTHETIC BIOLOGY
IF3.9
err2023-02-20
err12
errOAAI
errHuan, Yang W.; Torraca, Vincenzo; Brown, Russell; Fa-arun, Jidapha; Miles, Sydney L.; Oyarzun, Diego A.; Mostowy, Serge; Wang, Baojun
errShare
errSave
Accuracy and data efficiency in deep learning models of protein expression
errNATURE COMMUNICATIONS
IF15.7
err2022-12-15
err27
errOAAI
errNikolados, Evangelos-Marios; Wongprommoon, Arin; Aodha, Oisin Mac; Cambray, Guillaume; Oyarzun, Diego A.
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errSave
Microbial polysaccharides: An emerging family of natural biomaterials for cancer therapy and diagnostics
errSEMINARS IN CANCER BIOLOGY
IF15.7
err2022-11-01
err23
errOAAI
errPrateeksha; Sharma, Vivek K.; Liu, Xiaowen; Oyarzun, Diego A.; Abdel-Azeem, Ahmed M.; Atanasov, Atanas G.; Hesham, Abd El-Latif; Barik, Saroj K.; Gupta, Vijai Kumar; Singh, Brahma N.
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errSave
Integrated methylome and phenome study of the circulating proteome reveals markers pertinent to brain health
errNATURE COMMUNICATIONS
IF15.7
err2022-08-09
err15
errOAAI
errGadd, Danni A.; Hillary, Robert F.; McCartney, Daniel L.; Shi, Liu; Stolicyn, Aleks; Robertson, Neil A.; Walker, Rosie M.; McGeachan, Robert, I; Campbell, Archie; Xueyi, Shen; Barbu, Miruna C.; Green, Claire; Morris, Stewart W.; Harris, Mathew A.; Backhouse, Ellen, V; Wardlaw, Joanna M.; Steele, J. Douglas; Oyarzun, Diego A.; Muniz-Terrera, Graciela; Ritchie, Craig; Nevado-Holgado, Alejo; Chandra, Tamir; Hayward, Caroline; Evans, Kathryn L.; Porteous, David J.; Cox, Simon R.; Whalley, Heather C.; McIntosh, Andrew M.; Marioni, Riccardo E.
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errSave
Stabilization of antithetic control via molecular buffering
errJOURNAL OF THE ROYAL SOCIETY INTERFACE
IF3.5
err2022-03-09
err8
errOAAI
errHancock, Edward J.; Oyarzun, Diego A.
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errSave
Trade-Offs in Biosensor Optimization for Dynamic Pathway Engineering
errACS SYNTHETIC BIOLOGY
IF3.9
err2021-12-30
err18
errOAAI
errVerma, Babita K.; Mannan, Ahmad A.; Zhang, Fuzhong; Oyarzun, Diego A.
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Systems level profiling of chemotherapy-induced stress resolution in cancer cells reveals druggable trade-offs
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2021-04-21
err23
errOAAI
errSaavedra-Garcia, Paula; Roman-Trufero, Monica; Al-Sadah, Hibah A.; Blighe, Kevin; Lopez-Jimenez, Elena; Christoforou, Marilena; Penfold, Lucy; Capece, Daria; Xiong, Xiaobei; Miao, Yirun; Parzych, Katarzyna; Caputo, Valentina S.; Siskos, Alexandros P.; Encheva, Vesela; Liu, Zijing; Thiel, Denise; Kaiser, Martin F.; Piazza, Paolo; Chaidos, Aristeidis; Karadimitris, Anastasios; Franzoso, Guido; Snijders, Ambrosius P.; Keun, Hector C.; Oyarzun, Diego A.; Barahona, Mauricio; Auner, Holger W.
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Caroline Hayward
H-index: 161 · Papers: 1.1K
J
Joanna M. Wardlaw
H-index: 148 · Papers: 1.6K
H
Hideyuki Okano
H-index: 145 · Papers: 1.8K
A
Andrew M. McIntosh
H-index: 142 · Papers: 1.2K
S
Sang Yup Lee
H-index: 137 · Papers: 3.1K
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