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Deepanwita Banerjee

Lawrence Berkeley National Laboratory

13H-index
44Paper Count
702Citation Count
Published Papers 16
Publication Date
Influence of titer, rate, yield, and scale on the cost and life-cycle emissions of biomanufacturing
err2026-04-17
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errOAAI
errNawa Raj Baral; Minliang Yang; Deepanwita Banerjee; Aindrila Mukhopadhyay; Blake A. Simmons; Steven W. Singer; Jay D. Keasling; Corinne D. Scown
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Microbial Pathways for Cost-Effective Low-Carbon Renewable Indigoidine
err2025-02-14
err0
PREAI
errBaral, NR; Banerjee, D; Eng, T; Simmons, BA; Mukhopadhyay, A; Scown, CD
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Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source
err2025-01-14
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errOAAI
errBanerjee, Deepanwita; Menasalvas, Javier; Chen, Yan; Gin, Jennifer W.; Baidoo, Edward E. K.; Petzold, Christopher J.; Eng, Thomas; Mukhopadhyay, Aindrila
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Sustainable production of 2,3,5,6-Tetramethylpyrazine at high titer in engineered Corynebacterium glutamicum
err2024-07-16
err3
errOAAI
errSrinivasan, Aparajitha; Chen-Xiao, Kevin; Banerjee, Deepanwita; Oka, Asun; Pidatala, Venkataramana R.; Eudes, Aymerick; Simmons, Blake A.; Eng, Thomas; Mukhopadhyay, Aindrila
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Perspective on Lignin Conversion Strategies That Enable Next Generation Biorefineries
err2024-04-26
err3
errOAAI
errShrestha, Shilva; Goswami, Shubhasish; Banerjee, Deepanwita; Garcia, Valentina; Zhou, Elizabeth; Olmsted, Charles N.; Majumder, Erica L. -W.; Kumar, Deepak; Awasthi, Deepika; Mukhopadhyay, Aindrila; Singer, Steven W.; Gladden, John M.; Simmons, Blake A.; Choudhary, Hemant
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Genome-scale and pathway engineering for the sustainable aviation fuel precursor isoprenol production in Pseudomonas putida
err2024-03-01
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errOAAI
errBanerjee, Deepanwita; Yunus, Ian S.; Wang, Xi; Kim, Jinho; Srinivasan, Aparajitha; Menchavez, Russel; Chen, Yan; Gin, Jennifer W.; Petzold, Christopher J.; Martin, Hector Garcia; Magnuson, Jon K.; Adams, Paul D.; Simmons, Blake A.; Mukhopadhyay, Aindrila; Kim, Joonhoon; Lee, Taek Soon
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Economic and Environmental Trade-Offs of Simultaneous Sugar and Lignin Utilization for Biobased Fuels and Chemicals
err2023-12-19
err4
PREAI
errBaral, Nawa Raj; Banerjee, Deepanwita; Mukhopadhyay, Aindrila; Simmons, Blake A.; Singer, Steven W.; Scown, Corinne D.
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Improving microbial bioproduction under low-oxygen conditions
err2023-12-01
err2
PREAI
errKulakowski, Shawn; Banerjee, Deepanwita; Scown, Corinne D.; Mukhopadhyay, Aindrila
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Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering
err2023-09-01
err8
errOAAI
errEng, Thomas; Banerjee, Deepanwita; Menasalvas, Javier; Chen, Yan; Gin, Jennifer; Choudhary, Hemant; Baidoo, Edward; Chen, Jian Hua; Ekman, Axel; Kakumanu, Ramu; Diercks, Yuzhong Liu; Codik, Alex; Larabell, Carolyn; Gladden, John; Simmons, Blake A.; Keasling, Jay D.; Petzold, Christopher J.; Mukhopadhyay, Aindrila
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Perspectives for self-driving labs in synthetic biology
err2023-02-01
err32
errOAAI
errMartin, Hector G.; Radivojevic, Tijana; Zucker, Jeremy; Bouchard, Kristofer; Sustarich, Jess; Peisert, Sean; Arnold, Dan; Hillson, Nathan; Babnigg, Gyorgy; Marti, Jose M.; Mungall, Christopher J.; Beckham, Gregg; Waldburger, Lucas; Carothers, James; Sundaram, ShivShankar; Agarwal, Deb; Simmons, Blake A.; Backman, Tyler; Banerjee, Deepanwita; Tanjore, Deepti; Ramakrishnan, Lavanya; Singh, Anup
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Tuning a high performing multiplexed-CRISPRi Pseudomonas putida strain to further enhance indigoidine production
err2022-12-01
err15
errOAAI
errCzajka, Jeffrey J.; Banerjee, Deepanwita; Eng, Thomas; Menasalvas, Javier; Yan, Chunsheng; Munoz, Nathalie Munoz; Poirier, Brenton C.; Kim, Young-Mo; Baker, Scott E.; Tang, Yinjie J.; Mukhopadhyay, Aindrila
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Generation of Pseudomonas putida KT2440 Strains with Efficient Utilization of Xylose and Galactose via Adaptive Laboratory Evolution
err2021-08-19
err30
errOAAI
errLim, Hyun Gyu; Eng, Thomas; Banerjee, Deepanwita; Alarcon, Geovanni; Lau, Andrew K.; Park, Mee-Rye; Simmons, Blake A.; Palsson, Bernhard O.; Singer, Steven W.; Mukhopadhyay, Aindrila; Feist, Adam M.
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Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor
err2021-07-01
err30
errOAAI
errEng, Thomas; Banerjee, Deepanwita; Lau, Andrew K.; Bowden, Emily; Herbert, Robin A.; Trinh, Jessica; Prahl, Jan-Philip; Deutschbauer, Adam; Tanjore, Deepti; Mukhopadhyay, Aindrila
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Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
err2020-10-23
err80
errOAAI
errBanerjee, Deepanwita; Eng, Thomas; Lau, Andrew K.; Sasaki, Yusuke; Wang, Brenda; Chen, Yan; Prahl, Jan-Philip; Singan, Vasanth R.; Herbert, Robin A.; Liu, Yuzhong; Tanjore, Deepti; Petzold, Christopher J.; Keasling, Jay D.; Mukhopadhyay, Aindrila
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Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation
err2020-08-18
err10
errOAAI
errWehrs, Maren; Thompson, Mitchell G.; Banerjee, Deepanwita; Prahl, Jan-Philip; Morella, Norma M.; Barcelos, Carolina A.; Moon, Jadie; Costello, Zak; Keasling, Jay D.; Shih, Patrick M.; Tanjore, Deepti; Mukhopadhyay, Aindrila
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Systems and synthetic biology tools for advanced bioproduction hosts
err2020-08-01
err44
errOAAI
errChen, Yan; Banerjee, Deepanwita; Mukhopadhyay, Aindrila; Petzold, Christopher J.
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