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J

Jesper Tegnér

king abdullah university of science and technology

59H-index
440Paper Count
1.9WCitation Count
Published Papers 104
Publication Date
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Human growth plates house resting zone sub-populations with features of quiescent stem cells
errBone Research
IF15
err2026-08-05
err0
errOAAI
errMahtab Avijgan; Ana R. López-Pérez; Leire Alonso Galicia; Jose G. Marchan-Alvarez; Laura Sudupe; Ruihan Zhou; Amal Nazaraliyev; Žaneta Andrusivová; Ludvig Larsson; Pâmella Miranda; Doste R. Mamand; Yunhan Zhao; Farasat Zaman; Hong Qian; Klas Blomgren; Felipe Prosper; Oscar P. B. Wiklander; Jesper N. Tegner; Joakim Lundeberg; Lars Sävendahl; Reza Mirzazadeh; David Gomez-Cabrero; Phillip T. Newton
errShare
errSave
Unify learns cellular evolution with universal multimodal embeddings
errNature Communications
IF15.7
err2026-07-31
err0
errOAAI
errHuawen Zhong; Wenkai Han; Guoxin Cui; David Gomez-Cabrero; Jesper Tegner; Xin Gao; Manuel Aranda
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errSave
Stromal and endothelial transcriptional changes during progression from MGUS to myeloma and after treatment response
errNature Communications
IF15.7
err2026-06-23
err0
errOAAI
errItziar Cenzano; Miguel Cócera; Marta Larrayoz; Lorea Campos-Dopazo; Sonia Sanz; Azari Bantan; Amaia Vilas-Zornoza; Patxi San-Martin; Paula Aguirre-Ruiz; Diego Alignani; Aitziber Lopez; Ignacio Sancho González; Javier Ruiz; Purificacion Ripalda-Cemborain; Marta Abengozar-Muela; Emma Muiños-López; Vincenzo Lagani; Jesper Tegner; Mikel Hernáez; Xabier Agirre; Benjamin Ebert; Bruno Paiva; Paula Rodriguez-Otero; Luis-Esteban Tamariz-Amador; Jesús San-Miguel; Borja Saez; José A. Martinez-Climent; Isabel A. Calvo; David Gomez-Cabrero; Felipe Prosper
errShare
errSave
Single-Cell Profiling Reveals RAB13+ Endothelial Cells and Profibrotic Mesenchymal Cells in Aged Human Bone Marrow
errAging Cell
IF7.1
err2026-04-09
err0
errOAAI
errItziar Cenzano; Miguel Cócera; Ana Rosa Lopez-Perez; Lorea Campos-Dopazo; Javier Ruiz; Ignacio Sancho; Patxi San Martin-Uriz; Paula Aguirre-Ruiz; Sarai Sarvide; Amaia Vilas-Zornoza; Purificacion Ripalda-Cemborain; Diego Alignani; Aitziber Lopez; Marta Miñana Barrios; Delia Quilez Agreda; Jin Ye; Robert Lehmann; Laura Sudupe; Marta Abengozar-Muela; Álvaro Lopez-Janeiro; Luis-Esteban Tamariz-Amador; Emma Muiños-López; Borja Saez; Jesper Tegner; Isabel A. Calvo; David Gomez-Cabrero; Felipe Prosper
errShare
errSave
Predicting and interpreting cell-type-specific drug responses in the small-data regime using inductive priors
errNature Machine Intelligence
IF23.9
err2026-03-16
err0
errOAAI
errReem Alsulami; Robert Lehmann; Sumeer A. Khan; Vincenzo Lagani; Alberto Maillo; David Gomez-Cabrero; Narsis A. Kiani; Jesper Tegner
errShare
errSave
Single-cell and spatial transcriptomic profiling of cardiac fibroblasts following myocardial infarction
errScientific Data
IF6.9
err2026-01-13
err0
errOAAI
errSilvia C. Hernández; Marina Ainciburu; Laura Sudupe; Nuria Planell; María López-Moreno; Amaia Vilas-Zornoza; Luis Diaz-Martinez; Jorge Cobos-Figueroa; Juan P. Romero; Sarai Sarvide; Patxi San Martin-Uriz; Ana López-Pérez; Gloria Abizanda; Purificación Ripalda-Cemboráin; Emma Muinos-López; Vincenzo Lagani; Jesper Tegner; Ming Wu; Stefan Janssens; José M. Pérez-Pomares; Felipe Prósper; Adrián Ruiz-Villalba; David Gómez-Cabrero
errShare
errSave
Leveraging network motifs to improve artificial neural networks
errNature Communications
IF15.7
err2025-12-13
err0
errOAAI
errHaoling Zhang; Chao-Han Huck Yang; Hector Zenil; Pin-Yu Chen; Yue Shen; Narsis A. Kiani; Jesper N. Tegnér
errShare
errSave
Multimodal foundation transformer models for multiscale genomics
errNature Methods
IF32.1
err2025-12-01
err0
PREAI
errSumeer Ahmad Khan; Xabier Martínez-de-Morentin; Abdel Rahman Alsabbagh; Alberto Maillo; Vincenzo Lagani; David Gomez-Cabrero; Robert Lehmann; Jesper Tegner
errShare
errSave
Characterization of the bone marrow architecture of multiple myeloma using spatial transcriptomics
errCommunications Biology
IF5.1
err2025-11-20
err0
errOAAI
errEmma Muiños-Lopez; Ana Rosa Lopez-Perez; Laura Sudupe; Amaia Vilas-Zornoza; Sarai Sarvide; Purificacion Ripalda-Cemborain; Paula Aguirre-Ruiz; Patxi San Martin-Uriz; Marta Larrayoz; Laura Alvarez-Gigli; Marta Abengozar-Muela; Itziar Cenzano; Miguel Cócera; Javier Ruiz; Ignacio Sancho; Azari Bantan; Aleksandra Kurowska; Jin Ye; Phillip T. Newton; Bruno Paiva; Luis Esteban Tamariz-Amador; Juan R. Rodriguez-Madoz; Vincenzo Lagani; Jesper Tegner; Borja Saez; Jose Angel Martinez-Climent; Isabel A. Calvo; David Gomez-Cabrero; Felipe Prosper
errShare
errSave
Uncovering the regulatory landscape of early human B cell lymphopoiesis and its implications in the pathogenesis of B-ALL
errScience Advances
IF12.5
err2025-10-10
err0
PREAI
errNúria Planell; Xabier Martínez-de-Morentin; Daniel Mouzo; David Lara-Astiaso; Amaia Vilas-Zornoza; Patxi San Martín-Uriz; Diego Alignani; Bruno Paiva; Alberto Maillo; Aleksandra Kurowska; Nerea Berastegui; Paula Garcia-Olloqui; Arantxa Urdangarin; Peri Noori; Asier Ortega-Legarreta; Mikel Hernaez; Vincenzo Lagani; Narsis Kiani; Matthias Merkenschlager; Teresa Ezponda; José I. Martín-Subero; Ricardo N. Ramírez; Jesper Tegner; Felipe Prosper; David Gomez-Cabrero
errShare
errSave
Data meets prior knowledge for interpretable mechanistic inference in biology
errNature Machine Intelligence
IF23.9
err2025-07-22
err0
PREAI
errDavid Gomez-Cabrero; Jesper N. Tegnér
errShare
errSave
NLRP3-mediated glutaminolysis controls microglial phagocytosis to promote Alzheimer's disease progression
errIMMUNITY
IF26.3
err2025-02-01
err3
PREAI
errMcmanus, Roisin M.; Komes, Max P.; Griep, Angelika; Santarelli, Francesco; Schwartz, Stephanie; Perea, Juan Ramon; Schlachetzki, Johannes C. M.; Bouvier, David S.; Khalil, Michelle-Amirah; Lauterbach, Mario A.; Heinemann, Lea; Schlueter, Titus; Pour, Mehran Shaban; Lovotti, Marta; Stahl, Rainer; Duthie, Fraser; Rodriguez-Alcazar, Juan F.; Schmidt, Susanne V.; Spitzer, Jasper; Noori, Peri; Maillo, Alberto; Boettcher, Andreas; Herron, Brian; Mcconville, John; Gomez-Cabrero, David; Tegner, Jesper; Glass, Christopher K.; Hiller, Karsten; Latz, Eicke; Heneka, Michael T.
errShare
errSave
ClustAll: An R package for patient stratification in complex diseases
errplos biology
IF3.6
err2024-12-13
err0
errOAAI
errOrtega-Legarreta, Asier; Palomino-Echeverria, Sara; Huergo, Estefania; Lagani, Vincenzo; Kiani, Narsis A.; Rautou, Pierre-Emmanuel; Picola, Nuria Planell; Tegner, Jesper; Gomez-Cabrero, David
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errSave
Mapping Disease Transitions from Premalignant, Asymptomatic to Advanced Myeloma through Integrative Epigenomic and Transcriptional Analyses
errBLOOD
IF23.1
err2024-11-05
err0
PREAI
errKurowska, Aleksandra; Bantan, Azari; Shuwaikan, Raghad; Cenzano, Itziar; Aguirre-Ruiz, Paula; Miranda, Estibaliz; Garate, Leire; Vilas-Zornoza, Amaia; San-Martin, Patxi; Larrayoz, Marta; Gomez-Echarte, Nahia; Ariceta, Benat; Ortiz, Daniel Soto; Sobahy, Turki; Martin-Subero, Jose Ignacio; Lagani, Vincenzo; Tegner, Jesper; Martinez-Climent, Jose A.; Agirre, Xabier; Arrazola, Mikel Hernaez; Prosper, Felipe; Gomez-Cabrero, David
errShare
errSave
Latent space arithmetic on data embeddings from healthy multi-tissue human RNA-seq decodes disease modules
errPATTERNS
IF7.4
err2024-11-01
err0
errOAAI
errDe, Hendrik A.; Guala, Dimitri; Gustafsson, Mika; Synnergren, Jane; Tegne, Jesper; Lubovac-Pilav, Zelmina; Magnusson, Rasmus
errShare
errSave
A robust clustering strategy for stratification unveils unique patient subgroups in acutely decompensated cirrhosis
errJOURNAL OF TRANSLATIONAL MEDICINE
IF7.5
err2024-06-27
err1
errOAAI
errPalomino-Echeverria, Sara; Huergo, Estefania; Ortega-Legarreta, Asier; Raposo, Eva M. Uson; Aguilar, Ferran; Pena-Ramirez, Carlos de la; Lopez-Vicario, Cristina; Alessandria, Carlo; Laleman, Wim; Farias, Alberto Queiroz; Moreau, Richard; Fernandez, Javier; Arroyo, Vicente; Caraceni, Paolo; Lagani, Vincenzo; Sanchez-Garrido, Cristina; Claria, Joan; Tegner, Jesper; Trebicka, Jonel; Kiani, Narsis A.; Planell, Nuria; Rautou, Pierre-Emmanuel; Gomez-Cabrero, David
errShare
errSave
Generation of iPSC lines (KAIMRCi003A, KAIMRCi003B) from a Saudi patient with Dravet syndrome carrying homozygous mutation in the CPLX1 gene and heterozygous mutation in SCN9A
errHUMAN CELL
IF3.1
err2023-12-19
err0
errOAAI
errAlowaysi, Maryam; Al-Shehri, Mohammad; Badkok, Amani; Attas, Hanouf; Aboalola, Doaa; Baadhaim, Moayad; Alzahrani, Hajar; Daghestani, Mustafa; Zia, Asima; Al-Ghamdi, Khalid; Al-Ghamdi, Asayil; Zakri, Samer; Aouabdi, Sihem; Tegner, Jesper; Alsayegh, Khaled
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errSave
HLA-based banking of induced pluripotent stem cells in Saudi Arabia
errSTEM CELL RESEARCH & THERAPY
IF7.3
err2023-12-18
err5
errOAAI
errAlowaysi, Maryam; Lehmann, Robert; Al-Shehri, Mohammad; Baadhaim, Moayad; Alzahrani, Hajar; Aboalola, Doaa; Zia, Asima; Malibari, Dalal; Daghestani, Mustafa; Alghamdi, Khaled; Haneef, Ali; Jawdat, Dunia; Hakami, Fahad; Gomez-Cabrero, David; Tegner, Jesper; Alsayegh, Khaled
errShare
errSave
Reusability report: Learning the transcriptional grammar in single-cell RNA-sequencing data using transformers
errNATURE MACHINE INTELLIGENCE
IF23.9
err2023-11-16
err6
errOAAI
errKhan, Sumeer Ahmad; Maillo, Alberto; Lagani, Vincenzo; Lehmann, Robert; Kiani, Narsis A.; Gomez-Cabrero, David; Tegner, Jesper
errShare
errSave
Translating single-cell genomics into cell types
errNATURE MACHINE INTELLIGENCE
IF23.9
err2023-01-12
err1
PREAI
errTegner, Jesper N.
errShare
errSave

Research Directions

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Co-authors
Cooperation Journals
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J
James J. Collins
H-index: 162 · Papers: 589
J
Jesús F. San Miguel
H-index: 158 · Papers: 2.3K
A
André Franke
H-index: 152 · Papers: 1.2K
A
Albert-Ĺaszló Barabási
H-index: 150 · Papers: 662
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