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Haixu Tang cover

Haixu Tang (Haixu Tang)

Indiana University

57H-index
281Paper Count
1.5WCitation Count
Published Papers 79
Publication Date
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AI proteomics: from protein identification to virtual cells
errNature Methods
IF32.1
err2026-07-28
err0
PREAI
errYingying Sun; Jun A; Zhiwei Liu; Rui Sun; Liujia Qian; Samuel H. Payne; Wout Bittremieux; Markus Ralser; Chen Li; Yi Chen; Zhen Dong; Yasset Perez-Riverol; Asif Khan; Chris Sander; Ruedi Aebersold; Juan Antonio Vizcaíno; Jonathan R. Krieger; Jianhua Yao; Wen Han; Linfeng Zhang; Yunping Zhu; Yue Xuan; Benjamin Boyang Sun; Liang Qiao; Henning Hermjakob; Haixu Tang; Huanhuan Gao; Yamin Deng; Qing Zhong; Cheng Chang; Nuno Bandeira; Ming Li; Weinan E; Siqi Sun; Yuedong Yang; Gilbert S. Omenn; Yue Zhang; Ping Xu; Yan Fu; Xiaowen Liu; Christopher M. Overall; Yu Wang; Eric W. Deutsch; Luonan Chen; Jürgen Cox; Vadim Demichev; Fuchu He; Jiaxing Huang; Huilin Jin; Chao Liu; Nan Li; Zhongzhi Luan; Jiangning Song; Kaicheng Yu; Wanggen Wan; Tai Wang; Kang Zhang; Le Zhang; Peter A. Bell; Matthias Mann; Bing Zhang; Tiannan Guo
errShare
errSave
FIDDLE: a deep learning method for chemical formulas prediction from tandem mass spectra
errNature Communications
IF15.7
err2025-12-12
err0
errOAAI
errYuhui Hong; Sujun Li; Yuzhen Ye; Haixu Tang
errShare
errSave
Predicting the trend of SARS-CoV-2 mutation frequencies using historical data
errBIOINFORMATICS
IF5.4
err2025-10-01
err0
errOAAI
errZhou, Xinyu; Yan, Yi; Hu, Kevin; Tang, Haixu; Wang, Yijie; Wang, Lu; Zhang, Chi; Cao, Sha
errShare
errSave
Machine Learning in Small-Molecule Mass Spectrometry
errANNUAL REVIEW OF ANALYTICAL CHEMISTRY
IF7.5
err2025-02-27
err0
PREAI
errHong, Yuhui; Ye, Yuzhen; Tang, Haixu
errShare
errSave
Protein domain embeddings for fast and accurate similarity search
errGENOME RESEARCH
IF5.5
err2024-09-05
err1
errOAAI
errIovino, Benjamin Giovanni; Tang, Haixu; Ye, Yuzhen
errShare
errSave
Enhanced Structure-Based Prediction of Chiral Stationary Phases for Chromatographic Enantioseparation from 3D Molecular Conformations
errANALYTICAL CHEMISTRY
IF6.7
err2024-02-03
err4
PREAI
errHong, Yuhui; Welch, Christopher J.; Piras, Patrick; Tang, Haixu
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errSave
Accurate de novo peptide sequencing using fully convolutional neural networks
errNATURE COMMUNICATIONS
IF15.7
err2023-12-02
err17
errOAAI
errLiu, Kaiyuan; Ye, Yuzhen; Li, Sujun; Tang, Haixu
errShare
errSave
GlycoSLASH: Concurrent Glycopeptide Identification from Multiple Related LC-MS/MS Data Sets by Using Spectral Clustering and Library Searching
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2023-02-21
err4
errOAAI
errLi, Sujun; Zhu, Jianhui; Lubman, David M.; Zhou, He; Tang, Haixu
errShare
errSave
Non-Specific Signal Peptidase Processing of Extracellular Proteins in Staphylococcus aureus N315
errPROTEOMES
IF3.6
err2023-02-11
err2
errOAAI
errMisal, Santosh A.; Ovhal, Shital D.; Li, Sujun; Karty, Jonathan A.; Tang, Haixu; Radivojac, Predrag; Reilly, James P.
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errSave
Functional profile of host microbiome indicates Clostridioides difficile infection
errGUT MICROBES
IF11
err2022-10-26
err3
errOAAI
errNzabarushimana, Etienne; Tang, Haixu
errShare
errSave
A Reciprocal Best-hit Approach to Characterize Isomeric N-Glycans Using Tandem Mass Spectrometry
errANALYTICAL CHEMISTRY
IF6.7
err2022-07-01
err3
PREAI
errZhang, Rui; Peng, Wenjing; Huang, Yifan; Gautam, Sakshi; Wang, Junyao; Mechref, Yehia; Tang, Haixu
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errSave
GlycanGUI: Automated Glycan Annotation and Quantification Using Glucose Unit Index
errFRONTIERS IN CHEMISTRY
IF4.2
err2021-06-15
err2
errOAAI
errZhang, Rui; Peng, Wenjing; Gautam, Sakshi; Huang, Yifan; Mechref, Yehia; Tang, Haixu
errShare
errSave
MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification
errNATURE COMMUNICATIONS
IF15.7
err2021-06-08
err205
errOAAI
errWang, Tongxin; Shao, Wei; Huang, Zhi; Tang, Haixu; Zhang, Jie; Ding, Zhengming; Huang, Kun
errShare
errSave
GlycoHybridSeq: Automated Identification of N-Linked Glycopeptides Using Electron Transfer/High-Energy Collision Dissociation (EThcD)
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2021-05-19
err13
errOAAI
errZhang, Rui; Zhu, Jianhui; Lubman, David M.; Mechref, Yehia; Tang, Haixu
errShare
errSave
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
errNATURE COMMUNICATIONS
IF15.7
err2020-10-19
err60
errOAAI
errHerold, Malte; Arbas, Susana Martinez; Narayanasamy, Shaman; Sheik, Abdul R.; Kleine-Borgmann, Luise A. K.; Lebrun, Laura A.; Kunath, Benoit J.; Roume, Hugo; Bessarab, Irina; Williams, Rohan B. H.; Gillece, John D.; Schupp, James M.; Keim, Paul S.; Jaeger, Christian; Hoopmann, Michael R.; Moritz, Robert L.; Ye, Yuzhen; Li, Sujun; Tang, Haixu; Heintz-Buschart, Anna; May, Patrick; Muller, Emilie E. L.; Laczny, Cedric C.; Wilmes, Paul
errShare
errSave
A Fast and Memory-Efficient Spectral Library Search Algorithm Using Locality-Sensitive Hashing
errPROTEOMICS
IF3.9
err2020-06-29
err44
errOAAI
errWang, Lei; Liu, Kaiyuan; Li, Sujun; Tang, Haixu
errShare
errSave
New complexities of SOS-induced untargeted mutagenesis in Escherichia coli as revealed by mutation accumulation and whole-genome sequencing
errDNA REPAIR
IF2.7
err2020-06-01
err10
errOAAI
errNiccum, Brittany A.; Coplen, Christopher P.; Lee, Heewook; Ismail, Wazim Mohammed; Tang, Haixu; Foster, Patricia L.
errShare
errSave
Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
errANALYTICAL CHEMISTRY
IF6.7
err2020-02-13
err46
errOAAI
errLiu, Kaiyuan; Li, Sujun; Wang, Lei; Ye, Yuzhen; Tang, Haixu
errShare
errSave
Clonal reconstruction from time course genomic sequencing data
errBMC GENOMICS
IF3.7
err2019-12-30
err5
errOAAI
errIsmail, Wazim Mohammed; Tang, Haixu
errShare
errSave
The Symmetrical Wave Pattern of Base-Pair Substitution Rates across the Escherichia coli Chromosome Has Multiple Causes
errMBIO
IF4.7
err2019-08-27
err23
errOAAI
errNiccum, Brittany A.; Lee, Heewook; MohammedIsmail, Wazim; Tang, Haixu; Foster, Patricia L.
errShare
errSave

Research Directions

Artificial IntelligenceArtificial Intelligence and Machine LearningBioinformatics and Computational BiologyBiomedical and Health Data ScienceData ScienceData Security and PrivacyDatabases and Data MiningHealthSecurity and Privacy
Co-authors
Cooperation Journals
M
Matthias Mann
H-index: 250 · Papers: 1.4K
R
Ruedi Aebersold
H-index: 198 · Papers: 1.2K
朱
朱健康 (Jian‐Kang Zhu)
H-index: 192 · Papers: 751
E
Evan E. Eichler
H-index: 191 · Papers: 865
A
Anil K. Sood
H-index: 174 · Papers: 3.3K
View more