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M

Mohsen Zakeri

 johns hopkins university

12H-index
38Paper Count
573Citation Count
Published Papers 6
Publication Date
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KeBaB: k-mer Based Breaking for Finding Long MEMs
errSTRING PROCESSING AND INFORMATION RETRIEVAL, SPIRE 2025
IF0
err2026-01-01
err0
PREAI
errBrown, Nathaniel K.; Depuydt, Lore; Zakeri, Mohsen; Alhadi, Anas; Allam, Nour; Begleiter, Dove; Karpagavalli, Nithin Bharathi Kabilan; Khajjayam, Suchith Sridhar; Wahed, Hamza; Gagie, Travis; Langmead, Ben
errShare
errSave
EvANI benchmarking workflow for evolutionary distance estimation
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2025-05-01
err0
PREAI
errMajidian, Sina; Hwang, Stephen; Zakeri, Mohsen; Langmead, Ben
errShare
errSave
SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty
errGENOME BIOLOGY
IF9.4
err2023-07-12
err2
errOAAI
errWu, Euphy Y. Y.; Singh, Noor P. P.; Choi, Kwangbom; Zakeri, Mohsen; Vincent, Matthew; Churchill, Gary A. A.; Ackert-Bicknell, Cheryl L. L.; Patro, Rob; Love, Michael I. I.
errShare
errSave
Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data
errNATURE METHODS
IF32.1
err2022-03-11
err36
errOAAI
errHe, Dongze; Zakeri, Mohsen; Sarkar, Hirak; Soneson, Charlotte; Srivastava, Avi; Patro, Rob
errShare
errSave
AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite
errGENOME BIOLOGY
IF9.4
err2022-01-31
err5
errOAAI
errSkoufos, Giorgos; Almodaresi, Fatemeh; Zakeri, Mohsen; Paulson, Joseph N.; Patro, Rob; Hatzigeorgiou, Artemis G.; Vlachos, Ioannis S.
errShare
errSave
Alignment and mapping methodology influence transcript abundance estimation
errGENOME BIOLOGY
IF9.4
err2020-09-07
err74
errOAAI
errSrivastava, Avi; Malik, Laraib; Sarkar, Hirak; Zakeri, Mohsen; Almodaresi, Fatemeh; Soneson, Charlotte; Love, Michael I.; Kingsford, Carl; Patro, Rob
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
G
Gary A. Churchill
H-index: 92 · Papers: 516
A
Artemis G. Hatzigeorgiou
H-index: 59 · Papers: 281
M
Michael I. Love
H-index: 48 · Papers: 397
C
Charlotte Soneson
H-index: 47 · Papers: 219
B
Ben Langmead
H-index: 43 · Papers: 220
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