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The Mpox contextual data specification package: a data curation toolkit to support collaborative pathogen genomic surveillance Griffiths, Emma J.; Cameron, Rhiannon; Barclay, Charlotte; John, Nithu Sara; Dooley, Damion; Gill, Ivan; Iseminger, Madeline; Anwar, Muhammad Zohaib; Horsman, Mark E.; Mackenzie, Keith; Prystajecky, Natalie; Tyson, John; Jassem, Agatha; Lee, Tracy; Azana, Rob; Fung, Janet; Chan, Michael; Cheung, Branco; Tsang, Frankie; Fornika, Dan; Caleta, Jessica M.; Newman, Tara; Russell, Shannon L.; Zlosnik, James E. A.; Hoang, Linda; Knox, Natalie; Tyler, Andrea D.; Haidl, Emily; Yadav, Chanchal; Duggan, Ana T.; Kearney, Levon; Townend, Christopher; Cruz, Bernadette; Van Domselaar, Gary; Hsiao, William W. L. Share Save
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Serological evaluation of coronavirus IgA and IgG antibodies in a repeated cross-sectional cohort of unvaccinated and vaccinated pregnant individuals over three months following SARS-CoV-2 infection Tanunliong, Guadalein; Marquez, Ana Citlali; Sbihi, Hind; Pidduck, Tamara; Chang, Yin; Li, Fang Fang; Luk, Danielle; Forward, Lucia; McClymont, Elisabeth; Elwood, Chelsea; Krajden, Mel; Jassem, Agatha N.; Money, Deborah; Sekirov, Inna Share Save
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Whole genome sequencing and phylogenetic classification accelerate the implementation of respiratory syncytial virus genomic surveillance in Canada: a pilot study Gao, Ruimin; Buchanan, Cody; Dust, Kerry; Van Caeseele, Paul; Wong, Henry; Sjaarda, Calvin; Sheth, Prameet M.; Jassem, Agatha N.; Minion, Jessica; Bastien, Nathalie Share Save
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Recovery of Antibody Immunity After a Resurgence of Respiratory Syncytial Virus Infections Reicherz, Frederic; Paramo, Marina Vineta; Bone, Jeffrey N.; Lavoie, Alexanne; Li, Sirui; Golding, Liam; Jassem, Agatha; Watts, Allison; Abu-Raya, Bahaa; Lavoie, Pascal M. Share Save
Antibodies Against SARS-CoV-2 Do Not Cross-React with Endemic Coronaviruses in a Pediatric Population: Data from a Bangladesh Cohort Marquez, Ana Citlali; Tanunliong, Guadalein; Kabir, Mamun; Alam, Masud; Hossain, Biplob; Rashid, Humaira; Jassem, Agatha N.; Sekirov, Inna; Haque, Rashidul; Morshed, Muhammad Share Save
Descriptive epidemiology and phylogenetic analysis of highly pathogenic avian influenza H5N1 clade 2.3.4.4b in British Columbia (BC) and the Yukon, Canada, September 2022 to June 2023 Russell, Shannon L.; Andrew, Cassandra L.; Yang, Kevin C.; Coombe, Michelle; McGregor, Glenna; Redford, Tony; Jassem, Agatha N.; Zlosnik, James E. A.; Giacinti, Jolene; Kuchinski, Kevin S.; Palmer, John L.; Tyson, John R.; Fjell, Chris; Willie, Megan; Ross, Megan V.; Winchester, Maeve; Wilson, Laurie; Berhane, Yohannes; Thacker, Caeley; Harms, N. Jane; Soos, Catherine; Burns, Theresa; Prystajecky, Natalie; Himsworth, Chelsea Share Save
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Validation of an Automated, End-to-End Metagenomic Sequencing Assay for Agnostic Detection of Respiratory Viruses Gauthier, Nick P. G.; Chan, Wilson; Locher, Kerstin; Smailus, Duane; Coope, Robin; Charles, Marthe; Jassem, Agatha; Kopetzky, Jennifer; Chorlton, Samuel D.; Manges, Amee R. Share Save
Adaptive immune responses to two-dose COVID-19 vaccine series in healthy Canadian adults ≥ 50 years: a prospective, observational cohort study Gaultier, Gabrielle N.; Mcmillan, Brynn; Poloni, Chad; Lo, Mandy; Cai, Bing; Zheng, Jean J.; Baer, Hannah M.; Shulha, Hennady P.; Simmons, Karen; Marquez, Ana Citlali; Bartlett, Sofia R.; Cook, Laura; Levings, Megan K.; Steiner, Theodore; Sekirov, Inna; Zlosnik, James E. A.; Morshed, Muhammad; Skowronski, Danuta M.; Krajden, Mel; Jassem, Agatha N.; Sadarangani, Manish Share Save
Descriptive Epidemiology and Phylodynamics of the First Wave of an Outbreak of Highly Pathogenic Avian Influenza (H5N1 Clade 2.3.4.4b) in British Columbia and the Yukon, Canada, April to September 2022 Andrew, Cassandra L.; Russell, Shannon L.; Coombe, Michelle; Zlosnik, James E. A.; Kuchinski, Kevin S.; Caleta, Jessica; Fjell, Chris; Berhane, Yohannes; Bowes, Victoria; Redford, Tony; Thacker, Caeley; Wilson, Laurie; Henaff, Maud; Harms, N. Jane; Jassem, Agatha; Giacinti, Jolene; Soos, Catherine; Prystajecky, Natalie; Himsworth, Chelsea Share Save
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2023/24 mid-season influenza and Omicron XBB.1.5 vaccine effectiveness estimates from the Canadian Sentinel Practitioner Surveillance Network (SPSN) Skowronski, Danuta M.; Zhan, Yuping; Kaweski, Samantha E.; Sabaiduc, Suzana; Khalid, Ayisha; Olsha, Romy; Carazo, Sara; Dickinson, James A.; Mather, Richard G.; Charest, Hugues; Jassem, Agatha N.; Levade, Ines; Hasso, Maan; Zelyas, Nathan; Gao, Ruimin; Bastien, Nathalie Share Save
Factors associated with SARS-CoV-2 infection in unvaccinated children and young adults Silverberg, Sarah L.; Shulha, Hennady P.; Mcmillan, Brynn; He, Guanyuhui; Lee, Amy; Marquez, Ana Citlali; Bartlett, Sofia R.; Gill, Vivek; Abu-Raya, Bahaa; Bettinger, Julie A.; Cabrera, Adriana; Coombs, Daniel; Gantt, Soren; Goldfarb, David M.; Sauve, Laura; Krajden, Mel; Morshed, Muhammad; Sekirov, Inna; Jassem, Agatha N.; Sadarangani, Manish Share Save
Uptake of SARS-CoV-2 vaccination among structurally-marginalized people who use drugs in Vancouver, Canada Reddon, Hudson; Barker, Brittany; Bartlett, Sofia; Marquez, Ana Citlali; Sekirov, Inna; Jassem, Agatha; Morshed, Muhammad; Clemens, Ari; Beck McGreevy, Phoenix; Hayashi, Kanna; DeBeck, Kora; Krajden, Mel; Milloy, M. -j.; Socias, Maria Eugenia Share Save
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