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Sridhar Hannenhalli

cancer data science laboratory

53H-index
363Paper Count
2.4WCitation Count
Published Papers 90
Publication Date
Non-coding genetic variants underlying higher prostate cancer risk in men of African ancestry
err2025-11-20
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errOAAI
errShan Li; Kaniz Fatema; Nidharshan Sundarraj; Arashdeep Singh; Padma Sheila Rajagopal; Dimple Notani; David Y. Takeda; Sridhar Hannenhalli
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Identification of Clinically Relevant Cell State Interactions in the Tumor Microenvironment of IDH-Mut Glioma
err2025-11-01
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errOAAI
errSingh, Arashdeep; Mehani, Bharati; Gopalan, Vishaka; Aldape, Kenneth; Hannenhalli, Sridhar
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A subset of Polycomb-targeted transcription factor genes become hypermethylated yet upregulated in Colon cancer
err2025-08-05
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errOAAI
errMin-Kyeong Kwon; Goeun Park; Dayoung Go; Donghyun Park; Sridhar Hannenhalli; Sun Shim Choi
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Molecular signatures bidirectionally link myocardial infarction and lung cancer
err2025-04-09
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errOAAI
errNandi, Dhruva; Janardhanan, Rajiv; Hannenhalli, Sridhar; Agrawal, Piyush
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RNA splicing alterations in the development of acquired MAPKi resistance in melanoma
err2024-11-14
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PREAI
errMukherjee, Sumit; Singh, Arashdeep; Joo, Hyunjeong; Patiyal, Sumeet; Kim, Hyungsoo; Pal, Lipika R.; Wang, Kun; Day, Chi-Ping; Ronai, Ze'ev A.; Ruppin, Eytan; Hannenhalli, Sridhar
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Aberrant spliceosome activity via elevated intron retention and upregulation and phosphorylation of SF3B1 in chronic lymphocytic leukemia
err2024-06-01
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errOAAI
errKashyap, Manoj Kumar; Karathia, Hiren; Kumar, Deepak; Alvarez, Roberto Vera; Forero-Forero, Jose Vicente; Moreno, Eider; Lujan, Juliana Velez; Amaya-Chanaga, Carlos Ivan; Vidal, Newton Medeiros; Yu, Zhe; Ghia, Emanuela M.; Lengerke-Diaz, Paula A.; Achinko, Daniel; Choi, Michael Y.; Rassenti, Laura Z.; Marino-Ramirez, Leonardo; Mount, Stephen M.; Hannenhalli, Sridhar; Kipps, Thomas J.; Castro, Januario E.
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Characterizing the role of exosomal miRNAs in metastasis
err2024-04-05
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PREAI
errAgrawal, Piyush; Olgun, Gulden; Singh, Arashdeep; Gopalan, Vishaka; Hannenhalli, Sridhar
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Dynamics of transcript alternations and differential splicing in the evolution of acquired MAPKi resistance in melanoma
err2024-04-05
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PREAI
errMukherjee, Sumit; Singh, Arashdeep; Joo, Hyunjeong; Patiyal, Sumeet; Kim, Hyungsoo; Pal, Lipika R.; Wang, Kun; Day, Chi-Ping; Ronai, Ze'ev A.; Ruppin, Eytan; Hannenhalli, Sridhar
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Single-cell transcriptional analysis of embryonic melanoblasts pinpoints embryonic cell states that underlie targeted therapy and immune checkpoint blockade resistance
err2024-04-05
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PREAI
errGopalan, Vishaka; Wong, Chun Wai; Day, Chi-Ping; Perez-Guijarro, Eva; Lee, Maxwell P.; Jiang, Yuhong; Yang, Howard H.; Alves-Constantino, Maira; Sassano, Antonella; Smith, Cari; Simpson, Mark; Chin, Sung; Ebersole, Jessica; Gruen, Charli; Wu, Emily; Hannenhalli, Sridhar; Hurlstone, Adam; Merlino, Glenn; Marie, Kerrie
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Transcriptional profiling uncovers a unified program underlying the human metastatic and adjacent microenvironments
err2024-04-05
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PREAI
errAber, Etan R.; Contreras, Cristina F.; Sikder, Mohd Omar; Li, Kathy P.; Forbes, Greta E.; Gopalan, Vishaka; Hannenhalli, Sridhar; Kaplan, Rosandra N.
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Transcription factors organize into functional groups on the linear genome and in 3D chromatin
errHELIYON
IF3.6
err2023-08-01
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errOAAI
errVadnala, Rakesh Netha; Hannenhalli, Sridhar; Narlikar, Leelavati; Siddharthan, Rahul
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Noncoding RNA circuitry in melanoma onset, plasticity, and therapeutic response
err2023-08-01
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errOAAI
errGrafanaki, Katerina; Grammatikakis, Ioannis; Ghosh, Arin; Gopalan, Vishaka; Olgun, Gulden; Liu, Huaitian; Kyriakopoulos, George C.; Skeparnias, Ilias; Georgiou, Sophia; Stathopoulos, Constantinos; Hannenhalli, Sridhar; Merlino, Glenn; Marie, Kerrie L.; Day, Chi-Ping
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Transcriptomes of the tumor-adjacent normal tissues are more informative than tumors in predicting recurrence in colorectal cancer patients (vol 21, 209, 2023)
err2023-05-05
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errOAAI
errKim, Jinho; Kim, Hyunjung; Lee, Min-Seok; Lee, Heetak; Kim, Yeon Jeong; Lee, Woo Yong; Yun, Seong Hyeon; Kim, Hee Cheol; Hong, Hye Kyung; Hannenhalli, Sridhar; Cho, Yong Beom; Park, Donghyun; Choi, Sun Shim
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Transcriptomes of the tumor-adjacent normal tissues are more informative than tumors in predicting recurrence in colorectal cancer patients
err2023-03-21
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errOAAI
errKim, Jinho; Kim, Hyunjung; Lee, Min-seok; Lee, Heetak; Kim, Yeon Jeong; Lee, Woo Yong; Yun, Seong Hyeon; Kim, Hee Cheol; Hong, Hye Kyung; Hannenhalli, Sridhar; Cho, Yong Beom; Park, Donghyun; Choi, Sun Shim
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De novo human brain enhancers created by single-nucleotide mutations
err2023-02-17
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errOAAI
errLi, Shan; Hannenhalli, Sridhar; Ovcharenko, Ivan
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Broad misappropriation of developmental splicing profile by cancer in multiple organs
err2022-12-12
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errOAAI
errSingh, Arashdeep; Rajeevan, Arati; Gopalan, Vishaka; Agrawal, Piyush; Day, Chi-Ping; Hannenhalli, Sridhar
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Big data in basic and translational cancer research
err2022-09-05
err101
errOAAI
errJiang, Peng; Sinha, Sanju; Aldape, Kenneth; Hannenhalli, Sridhar; Sahinalp, Cenk; Ruppin, Eytan
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