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A systematic evaluation of the therapeutic potential of endogenous-ADAR editors in cancer prevention and treatment Merdler-Rabinowicz, Rona; Dadush, Ariel; Patiyal, Sumeet; Rajagopal, Padma Sheila; Daya, Gulzar N.; Ben-Aroya, Shay; Schaffer, Alejandro A.; Eisenberg, Eli; Ruppin, Eytan; Levanon, Erez Y. Share Save
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Tumor and blood B-cell abundance outperforms established immune checkpoint blockade response prediction signatures in head and neck cancer Chang, T. -g.; Spathis, A.; Schaffer, A. A.; Gavrielatou, N.; Kuo, F.; Jia, D.; Mukherjee, S.; Sievers, C.; Economopoulou, P.; Anastasiou, M.; Moutafi, M.; Pal, L. R.; Vos, J.; Lee, A. S.; Lam, S.; Zhao, K.; Jiang, P.; Allen, C. T.; Foukas, P.; Gomatou, G.; Altan-Bonnet, G.; Morris, L. G. T.; Psyrri, A.; Ruppin, E. Share Save
Chromosome 7 Gain Compensates for Chromosome 10 Loss in Glioma Nair, Nishanth Ulhas; Schaffer, Alejandro A.; Gertz, E. Michael; Cheng, Kuoyuan; Zerbib, Johanna; Sahu, Avinash Das; Leor, Gil; Shulman, Eldad D.; Aldape, Kenneth D.; Ben-David, Uri; Ruppin, Eytan Share Save
Identification of intracellular bacteria from multiple single-cell RNA-seq platforms using CSI-Microbes Robinson, Welles; Stone, Joshua K.; Schischlik, Fiorella; Gasmi, Billel; Kelly, Michael C.; Seibert, Charlie; Dadkhah, Kimia; Gertz, E. Michael; Lee, Joo Sang; Zhu, Kaiyuan; Ma, Lichun; Wang, Xin Wei; Sahinalp, S. Cenk; Patro, Rob; Leiserson, Mark D. M.; Harris, Curtis C.; Schaffer, Alejandro A.; Ruppin, Eytan Share Save
Microenvironment shapes small-cell lung cancer neuroendocrine states and presents therapeutic opportunities Desai, Parth; Takahashi, Nobuyuki; Kumar, Rajesh; Nichols, Samantha; Malin, Justin; Hunt, Allison; Schultz, Christopher; Cao, Yingying; Tillo, Desiree; Nousome, Darryl; Chauhan, Lakshya; Sciuto, Linda; Jordan, Kimberly; Rajapakse, Vinodh; Tandon, Mayank; Lissa, Delphine; Zhang, Yang; Kumar, Suresh; Pongor, Lorinc; Singh, Abhay; Schroder, Brett; Sharma, Ajit Kumar; Chang, Tiangen; Vilimas, Rasa; Pinkiert, Danielle; Graham, Chante; Butcher, Donna; Warner, Andrew; Sebastian, Robin; Mahon, Mimi; Baker, Karen; Cheng, Jennifer; Berger, Ann; Lake, Ross; Abel, Melissa; Krishnamurthy, Manan; Chrisafis, George; Fitzgerald, Peter; Nirula, Micheal; Goyal, Shubhank; Atkinson, Devon; Bateman, Nicholas W.; Abulez, Tamara; Nair, Govind; Apolo, Andrea; Guha, Udayan; Karim, Baktiar; El Meskini, Rajaa; Ohler, Zoe Weaver; Jolly, Mohit Kumar; Schaffer, Alejandro; Ruppin, Eytan; Kleiner, David; Miettinen, Markku; Brown, G. Tom; Hewitt, Stephen; Conrads, Thomas; Thomas, Anish Share Save
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors Sinha, Sanju; Vegesna, Rahulsimham; Mukherjee, Sumit; Kammula, Ashwin V.; Dhruba, Saugato Rahman; Wu, Wei; Kerr, D. Lucas; Nair, Nishanth Ulhas; Jones, Matthew G.; Yosef, Nir; Stroganov, Oleg V.; Grishagin, Ivan; Aldape, Kenneth D.; Blakely, Collin M.; Jiang, Peng; Thomas, Craig J.; Benes, Cyril H.; Bivona, Trever G.; Schaeffer, Alejandro A.; Ruppin, Eytan Share Save
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Why does the loss of chromosomes 10 and the gain of 7 co-occur in gliomas Nair, Nishanth Ulhas; Schaffer, Alejandro A.; Gertz, Michael E.; Cheng, Kuoyuan; Das Sahu, Avinash; Leor, Gil; Shulman, Eldad D.; Aldape, Kenneth D.; Ben-David, Uri; Ruppin, Eytan Share Save
Cell-type-specific transcriptomic immune aging clocks reveal clinically relevant associations with chronic illnesses including cancer Gurevich-Schmidt, Yael; Wang, Kun; Wu, Di; Madan, Sanna; Gopalan, Vishaka; Sinha, Sanju; Wang, Binbin; Dhruba, Saugato Rahman; Schaffer, Alejandro A.; Ruppin, Eytan Share Save
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