Stephen A. Ramsey - Publications, H-index & Citations

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Stephen A. Ramsey

oregon state university

36H-index

142Paper Count

5.5KCitation Count

Published Papers 47

Publication Date

Single cell transcriptome analysis of elephant leukocytes reveals a large number of monocytes in peripheral blood

JOURNAL OF IMMUNOLOGY

IF3.4

2025-11-01

PREAI

Dolan, Brian P.; Ramsey, Stephen; Shulzhenko, Natalia; Johns, Jennifer; Bolanos, Sydney

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Machine Learning Applied to Electrochemical Data Processing for Improved Analyte Quantification in Complex Saliva

Electroanalysis

IF2.3

2025-09-04

PREAI

Sangam Man Buddhacharya; Adam Ramsey; Stephen A. Ramsey; Elain Fu

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Announcing the Biomedical Data Translator: Initial Public Release

cts clinical and translational science

IF0

2025-07-09

OAAI

Karamarie Fecho; Gwênlyn Glusman; Sergio E. Baranzini; Chris Bizon; Matthew Brush; William Byrd; Lawrence Chung; Andrew Crouse; Eric Deutsch; Michel Dumontier; Aleksandra Foksinska; Jennifer Hadlock; Kaiwen He; Sui Huang; Robert Hubal; Gregory M. Hyde; Sharat Israni; Kelyne Kenmogne; David Koslicki; Jana Dorfman Marcette; Ewy A. Mathe; Abrar Mesbah; Sierra A. T. Moxon; Christopher J. Mungall; John Osborne; Carrie Pasfield; Guangrong Qin; Stephen A. Ramsey; Justin Reese; Jared C. Roach; Reese Rose; Karthik Soman; Andrew I. Su; Casey Ta; Gaurav Vaidya; Rosina Weber; Qi Wei; Mark Williams; Chunlei Wu; Colleen Xu; Chase Yakaboski; The Biomedical Data Translator Consortium

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Causal analysis for multivariate integrated clinical and environmental exposures data (vol 25, pg 27, 2025)

BMC MEDICAL INFORMATICS AND DECISION MAKING

IF3.8

2025-02-13

OAAI

Sinha, Meghamala; Haaland, Perry; Krishnamurthy, Ashok; Lan, Bo; Ramsey, Stephen A.; Schmitt, Patrick L.; Sharma, Priya; Xu, Hao; Fecho, Karamarie

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Causal analysis for multivariate integrated clinical and environmental exposures data

BMC MEDICAL INFORMATICS AND DECISION MAKING

IF3.8

2025-01-15

OAAI

Sinha, Meghamala; Haaland, Perry; Krishnamurthy, Ashok; Lan, Bo; Ramsey, Stephen A.; Schmitt, Patrick L.; Sharma, Priya; Xu, Hao; Fecho, Karamarie

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Genome-scale metabolic model accurately predicts fermentation of glucose by Chromochloris zofingiensis

ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS

IF4.5

2024-12-01

OAAI

Meagher, M; Metcalf, A; Vigliotti, M; Ramsey, SA; Prentice, W; Cohen, L; Upadhyaya, S; Roth, MS; Boyle, NR

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Progress on Electrochemical Sensing of Pharmaceutical Drugs in Complex Biofluids

CHEMOSENSORS

IF3.7

2023-08-21

OAAI

Fu, Elain; Khederlou, Khadijeh; Lefevre, Noel; Ramsey, Stephen A.; Johnston, Matthew L.; Wentland, Lael

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Rapid PCR-based Genetic Typing System across Chlamydia trachomatis

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2023-01-01

OAAI

Roetcisoender, Jake; Carrell, Steven; Ramsey, Stephen; Rockey, Daniel

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The precision medicine process for treating rare disease using the artificial intelligence tool mediKanren

FRONTIERS IN ARTIFICIAL INTELLIGENCE

IF4.7

2022-09-30

OAAI

Foksinska, Aleksandra; Crowder, Camerron M.; Crouse, Andrew B.; Henrikson, Jeff; Byrd, William E.; Rosenblatt, Gregory; Patton, Michael J.; He, Kaiwen; Tran-Nguyen, Thi K.; Zheng, Marissa; Ramsey, Stephen A.; Amin, Nada; Osborne, John; Might, Matthew

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Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science

CTS-CLINICAL AND TRANSLATIONAL SCIENCE

IF2.8

2022-06-06

OAAI

Unni, Deepak R.; Moxon, Sierra A. T.; Bada, Michael; Brush, Matthew; Bruskiewich, Richard; Caufield, J. Harry; Clemons, Paul A.; Dancik, Vlado; Dumontier, Michel; Fecho, Karamarie; Glusman, Gustavo; Hadlock, Jennifer J.; Harris, Nomi L.; Joshi, Arpita; Putman, Tim; Qin, Guangrong; Ramsey, Stephen A.; Shefchek, Kent A.; Solbrig, Harold; Soman, Karthik; Thessen, Anne E.; Haendel, Melissa A.; Bizon, Chris; Mungall, Christopher J.

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Exosomal proteomic signatures correlate with drug resistance and carboplatin treatment outcome in a spontaneous model of canine osteosarcoma

CANCER CELL INTERNATIONAL

IF6

2021-05-01

OAAI

Weinman, Marcus A.; Ramsey, Stephen A.; Leeper, Haley J.; Brady, Jacqueline, V; Schlueter, Andrew; Stanisheuski, Stanislau; Maier, Claudia S.; Miller, Tasha; Ruby, Carl E.; Bracha, Shay

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Wnt signaling enhances macrophage responses to IL-4 and promotes resolution of atherosclerosis

ELIFE

IF0

2021-03-15

OAAI

Weinstock, Ada; Rahman, Karishma; Yaacov, Or; Nishi, Hitoo; Menon, Prashanthi; Nikain, Cyrus A.; Garabedian, Michela L.; Pena, Stephanie; Akbar, Naveed; Sansbury, Brian E.; Heffron, Sean P.; Liu, Jianhua; Marecki, Gregory; Fernandez, Dawn; Brown, Emily J.; Ruggles, Kelly V.; Ramsey, Stephen A.; Giannarelli, Chiara; Spite, Matthew; Choudhury, Robin P.; Loke, P'ng; Fisher, Edward A.

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Vitamin E Deficiency Disrupts Gene Expression Networks during Zebrafish Development

NUTRIENTS

IF5

2021-01-30

OAAI

Head, Brian; Ramsey, Stephen A.; Kioussi, Chrissa; Tanguay, Robyn L.; Traber, Maret G.

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Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis

BMC GENOMICS

IF3.7

2020-02-12

OAAI

Kashyap, Amita; Rhodes, Adelaide; Kronmiller, Brent; Berger, Josie; Champagne, Ashley; Davis, Edward W.; Finnegan, Mitchell, V; Geniza, Matthew; Hendrix, David A.; Loehr, Christiane, V; Petro, Vanessa M.; Sharpton, Thomas J.; Wells, Jackson; Epps, Clinton W.; Jaiswal, Pankaj; Tyler, Brett M.; Ramsey, Stephen A.

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Elucidating the transcriptional program of feline injection-site sarcoma using a cross-species mRNA-sequencing approach

BMC CANCER

IF3.4

2019-04-04

OAAI

Wei, Qi; Ramsey, Stephen A.; Larson, Maureen K.; Berlow, Noah E.; Ochola, Donasian; Shiprack, Christopher; Kashyap, Amita; Seguin, Bernard; Keller, Charles; Lohr, Christiane V.

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Single-cell analysis of fate-mapped macrophages reveals heterogeneity, including stem-like properties, during atherosclerosis progression and regression

JCI INSIGHT

IF6.1

2019-02-21

230

OAAI

Lin, Jian-Da; Nishi, Hitoo; Poles, Jordan; Niu, Xiang; Mccauley, Caroline; Rahman, Karishma; Brown, Emily J.; Yeung, Stephen T.; Vozhilla, Nikollaq; Weinstock, Ada; Ramsey, Stephen A.; Fisher, Edward A.; Loke, P'ng

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Loss of 2 Akt (Protein Kinase B) Isoforms in Hematopoietic Cells Diminished Monocyte and Macrophage Survival and Reduces Atherosclerosis in Ldl Receptor-Null Mice

ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY

IF7.4

2019-02-01

OAAI

Babaev, Vladimir R.; Ding, Lei; Zhang, Youmin; May, James M.; Ramsey, Stephen A.; Vickers, Kasey C.; Linton, MacRae F.

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FACS-Seq analysis of Pax3-derived cells identifies non-myogenic lineages in the embryonic forelimb

SCIENTIFIC REPORTS

IF3.9

2018-05-16

OAAI

Singh, Arun J.; Chang, Chih-Ning; Ma, Hsiao-Yen; Ramsey, Stephen A.; Filtz, Theresa M.; Kioussi, Chrissa

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Differential gene regulatory networks in development and disease

CELLULAR AND MOLECULAR LIFE SCIENCES

IF6.2

2017-10-10

OAAI

Singh, Arun J.; Ramsey, Stephen A.; Filtz, Theresa M.; Kioussi, Chrissa

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Inflammatory Ly6Chi monocytes and their conversion to M2 macrophages drive atherosclerosis regression

JOURNAL OF CLINICAL INVESTIGATION

IF13.6

2017-06-26

284

OAAI

Rahman, Karishma; Vengrenyuk, Yuliya; Ramsey, Stephen A.; Vila, Noemi Rotllan; Girgis, Natasha M.; Liu, Jianhua; Gusarova, Viktoria; Gromada, Jesper; Weinstock, Ada; Moore, Kathryn J.; Loke, P'ng; Fisher, Edward A.

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Research Directions