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Christopher Benner

university of california san diego

70H-index
277Paper Count
4.9WCitation Count
Published Papers 74
Publication Date
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Automated chromatin profiling with spa-ChIP-seq uncovers the impacts of condition variations
errGenome Research
IF5.5
err2026-01-01
err0
PREAI
errCao, Yuwei; Patel, Lauren; Alcoser, Lauren; Mendenhall, Eric; Benner, Christopher; Heinz, Sven; Goren, Alon
errShare
errSave
Repurposing Carfilzomib as a Promising Drug for Targeted Therapy in Gastric Cancer
errCancers 2025, Vol. 17, Page 3420
IF0
err2025-10-24
err0
errOAAI
errEmma Mathilde Kurstjens; Kristin E. Cox; Prerna Bali; Siamak Amirfakhri; Jonathan Hernandez; Ivonne Lozano-Pope; Christopher Benner; Michael Bouvet; Marygorret Obonyo
errShare
errSave
Integrative Multi-Omics Analysis In Vivo Identifies Influenza A Virus Host Factors
erriScience
IF4.1
err2025-09-24
err0
errOAAI
errLeah P. Shriver; Benjamin Polacco; Manon Eckhardt; Max W. Chang; Carles Martínez-Romero; Kayla Adkins-Travis; Celina Cahalane; Kelsey Haas; David A. Stein; Slim Fourati; Laura Martin-Sancho; Giorgi Metreveli; Jeffrey R. Johnson; Raquel Muñoz-Moreno; Billy W. Newton; Robyn M. Kaake; Yuan Zhou; David Jimenez-Morales; John VonDollen; Erik Verschueren; Danielle L. Swaney; Thong T. Nguyen; Erica J. Stevenson; Ethan Stancliffe; Gary J. Patti; Randy Albrecht; Hong M. Moulton; Lars Pache; Rafick P. Sekaly; Christopher Benner; Judd F. Hultquist; Sumit K. Chanda; Adolfo Garcia-Sastre; Nevan J. Krogan
errShare
errSave
Genetic variation in the activity of a TREM2–p53 signaling axis determines oxygen-induced lung injury
errNature Immunology
IF27.6
err2025-07-25
err0
errOAAI
errYohei Abe; Nathanael J. Spann; Wenxi Tang; Fenghua Zeng; Cadence Seymour; Sean Jansky; Jason L. Guo; Robert Huff; Kelly Chanthavixay; John Lalith Charles Richard; Miguel Mooney; Debanjan Dhar; Souradipta Ganguly; David M. Lopez; Michael T. Longaker; Christopher Benner; Christopher K. Glass; Eniko Sajti
errShare
errSave
Zika but not Dengue virus infection limits NF-κB activity in human monocyte-derived dendritic cells and suppresses their ability to activate T cells
errNATURE COMMUNICATIONS
IF15.7
err2025-03-25
err1
errOAAI
errWang, Ying-Ting; Branche, Emilie; Xie, Jialei; Mcmillan, Rachel E.; Ana-Sosa-Batiz, Fernanda; Lu, Hsueh-Han; Li, Qin Hui; Clark, Alex E.; Valls Cuevas, Joan M.; Viramontes, Karla M.; Garretson, Aaron F.; dos Santos Alves, Rubens Prince; Heinz, Sven; Benner, Christopher; Carlin, Aaron F.
errShare
errSave
Dynamic WNT signaling controls differentiation of hematopoietic progenitor cells from human pluripotent stem cells
errSCIENCE CHINA-LIFE SCIENCES
IF9.5
err2025-03-11
err0
PREAI
errLi, Mo; Suzuki, Keiichiro; Wang, Mengge; Benner, Christopher; Ku, Manching; Ma, Li; Kobari, Ladan; Kim, Na Young; Montserrat, Nuria; Chang, Chan-Jung; Liu, Guanghui; Qu, Jing; Xu, Jinna; Zhang, Yingzi; Aizawa, Emi; Wu, Jun; Douay, Luc; Esteban, Concepcion Rodriguez
errShare
errSave
The Wild West of spike-in normalization
errNATURE BIOTECHNOLOGY
IF41.7
err2024-09-13
err0
PREAI
errPatel, Lauren A.; Cao, Yuwei; Mendenhall, Eric M.; Benner, Christopher; Goren, Alon
errShare
errSave
Triclosan administration to humanized UDP-glucuronosyltransferase 1 neonatal mice induces UGT1A1 through a dependence on PPARa and ATF4
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2024-06-01
err0
errOAAI
errWeber, Andre A.; Yang, Xiaojing; Mennillo, Elvira; Wong, Samantha; Le, Sabrina; Teo, Jia Ying Ashley; Chang, Max; Benner, Christopher W.; Ding, Jeffrey; Jain, Mohit; Chen, Shujuan; Karin, Michael; Tukey, Robert H.
errShare
errSave
Drug target prediction through deep learning functional representation of gene signatures
errNATURE COMMUNICATIONS
IF15.7
err2024-02-29
err3
errOAAI
errChen, Hao; King, Frederick J.; Zhou, Bin; Wang, Yu; Canedy, Carter J.; Hayashi, Joel; Zhong, Yang; Chang, Max W.; Pache, Lars; Wong, Julian L.; Jia, Yong; Joslin, John; Jiang, Tao; Benner, Christopher; Chanda, Sumit K.; Zhou, Yingyao
errShare
errSave
Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancers
errELIFE
IF0
err2024-02-21
err156
PREAI
errKelso, Timothy W. R.; Porter, Devin K.; Amaral, Maria Luisa; Shokhirev, Maxim N.; Benner, Christopher; Hargreaves, Diana C.
errShare
errSave
Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian hamsters
errPLOS PATHOGENS
IF4.9
err2024-01-10
err2
errOAAI
errDiego, Juan Garcia-Bernalt; Singh, Gagandeep; Jangra, Sonia; Handrejk, Kim; Laporte, Manon; Chang, Lauren A.; El Zahed, Sara S.; Pache, Lars; Chang, Max W.; Warang, Prajakta; Aslam, Sadaf; Mena, Ignacio; Webb, Brett T.; Benner, Christopher; Garcia-Sastre, Adolfo; Schotsaert, Michael
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errSave
Effects of Early Life Oral Arsenic Exposure on Intestinal Tract Development and Lipid Homeostasis in Neonatal Mice: Implications for NAFLD Development
errENVIRONMENTAL HEALTH PERSPECTIVES
IF9.8
err2023-09-01
err3
errOAAI
errYang, Xiaojing; Weber, Andre A.; Mennillo, Elvira; Secrest, Patrick; Chang, Max; Wong, Samantha; Le, Sabrina; Liu, Junlai; Benner, Christopher W.; Karin, Michael; Gordts, Philip L. S. M.; Tukey, Robert H.; Chen, Shujuan
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errSave
Combining TSS-MPRA and sensitive TSS profile dissimilarity scoring to study the sequence determinants of transcription initiation
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-07-05
err1
errOAAI
errGuzman, Carlos; Duttke, Sascha; Zhu, Yixin; Saldanha, Camila De Arruda; Downes, Nicholas L.; Benner, Christopher; Heinz, Sven
errShare
errSave
SARS-CoV-2 Ancestral and Variant of Concern Breakthrough infections boost both cross-reactive cellular and humoral immune responses in mRNA-vaccinated Hamsters.
errJOURNAL OF IMMUNOLOGY
IF3.4
err2023-05-01
err0
errOAAI
errSchotsaert, Michael; Diego, Juan Garcia-Bernalt; Singh, Gagandeep; Jangra, Sonia; Garcia-Sastre, Adolfo; Laporte, Manon; Chang, Lauren A.; Handrejk, Kim; Rathnasinghe, Raveen; El Zahed, Sara; Chang, Max W.; Warang, Prajakta; Aslam, Sadaf; Benner, Christopher; Krammer, Florian; Mena, Ignacio
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errSave
Genome-Wide Analysis of Estrogen Receptor α DNA Binding and Tethering Mechanisms Identifies Runx1 as a Novel Tethering Factor in Receptor-Mediated Transcriptional Activation
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-20
err212
errOAAI
errStender, Joshua D.; Kim, Kyuri; Charn, Tze Howe; Komm, Barry; Chang, Ken C. N.; Kraus, W. Lee; Benner, Christopher; Glass, Christopher K.; Katzenellenbogen, Benita S.
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errSave
Serum Response Factor Utilizes Distinct Promoter- and Enhancer-Based Mechanisms To Regulate Cytoskeletal Gene Expression in Macrophages
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-20
err60
errOAAI
errSullivan, Amy L.; Benner, Christopher; Heinz, Sven; Huang, Wendy; Xie, Lan; Miano, Joseph M.; Glass, Christopher K.
errShare
errSave
Oral arsenic administration to humanized UDP-glucuronosyltransferase 1 neonatal mice induces UGT1A1 through a dependence on Nrf2 and PXR
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2023-03-01
err5
errOAAI
errYang, Xiaojing; Weber, Andre A.; Mennillo, Elvira; Paszek, Miles; Wong, Samantha; Le, Sabrina; Teo, Jia Ying Ashley; Chang, Max; Benner, Christopher W.; Tukey, Robert H.; Chen, Shujuan
errShare
errSave
Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients
errCELL REPORTS MEDICINE
IF10.6
err2023-02-01
err4
errOAAI
errLam, Michael Tun Yin; Duttke, Sascha H.; Odish, Mazen F.; Le, Hiep D.; Hansen, Emily A.; Nguyen, Celina T.; Trescott, Samantha; Kim, Roy; Deota, Shaunak; Chang, Max W.; Patel, Arjun; Hepokoski, Mark; Alotaibi, Mona; Rolfsen, Mark; Perofsky, Katherine; Warden, Anna S.; Foley, Jennifer; Ramirez, Sydney I.; Dan, Jennifer M.; Abbott, Robert K.; Crotty, Shane; Alexander, Laura E. Crotty; Malhotra, Atul; Panda, Satchidananda; Benner, Christopher W.; Coufal, Nicole G.
errShare
errSave
MEPP: more transparent motif enrichment by profiling positional correlations
errgenomics proteomics bioinformatics
IF2.8
err2022-10-17
err2
errOAAI
errDelos Santos, Nathaniel P.; Duttke, Sascha; Heinz, Sven; Benner, Christopher
errShare
errSave
SREBP2-dependent lipid gene transcription enhances the infection of human dendritic cells by Zika virus
errNATURE COMMUNICATIONS
IF15.7
err2022-09-12
err23
errOAAI
errBranche, Emilie; Wang, Ying-Ting; Viramontes, Karla M.; Cuevas, Joan M. Valls; Xie, Jialei; Ana-Sosa-Batiz, Fernanda; Shafee, Norazizah; Duttke, Sascha H.; McMillan, Rachel E.; Clark, Alex E.; Nguyen, Michael N.; Garretson, Aaron F.; Crames, Jan J.; Spann, Nathan J.; Zhu, Zhe; Rich, Jeremy N.; Spector, Deborah H.; Benner, Christopher; Shresta, Sujan; Carlin, Aaron F.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
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Michael Karin
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John R. Yates
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Johan Auwerx
H-index: 183 · Papers: 913
T
Tony Hunter
H-index: 173 · Papers: 652
C
Christopher K. Glass
H-index: 170 · Papers: 569
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