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Alexander L. Jaffe

Stanford University

17H-index
74Paper Count
2.0KCitation Count
Published Papers 16
Publication Date
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Diverse microbiome functions, limited temporal variation and substantial genomic conservation within sedimentary and granite rock deep underground research laboratories
errENVIRONMENTAL MICROBIOME
IF5.4
err2024-12-18
err0
errOAAI
errAmano, Yuki; Sachdeva, Rohan; Gittins, Daniel; Anantharaman, Karthik; Lei, Shufei; Valentin-Alvarado, Luis E.; Diamond, Spencer; Beppu, Hikari; Iwatsuki, Teruki; Mochizuki, Akihito; Miyakawa, Kazuya; Ishii, Eiichi; Murakami, Hiroaki; Jaffe, Alexander L.; Castelle, Cindy; Lavy, Adi; Suzuki, Yohey; Banfield, Jillian F.
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errSave
Candidate Phyla Radiation bacteria
errCURRENT BIOLOGY
IF7.5
err2024-02-01
err2
PREAI
errJaffe, Alexander L.; Banfield, Jillian F.
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errSave
Autotrophic biofilms sustained by deeply sourced groundwater host diverse bacteria implicated in sulfur and hydrogen metabolism
errMICROBIOME
IF12.7
err2024-01-26
err3
errOAAI
errValentin-Alvarado, Luis E.; Fakra, Sirine C.; Probst, Alexander J.; Giska, Jonathan R.; Jaffe, Alexander L.; Oltrogge, Luke M.; West-Roberts, Jacob; Rowland, Joel; Manga, Michael; Savage, David F.; Greening, Chris; Baker, Brett J.; Banfield, Jillian F.
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errSave
Host translation machinery is not a barrier to phages that interact with both CPR and non-CPR bacteria
errMBIO
IF4.7
err2023-12-19
err2
errOAAI
errLiu, Jett; Jaffe, Alexander L.; Chen, Linxing; Bor, Batbileg; Banfield, Jillian F.
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errSave
Habitat Transition in the Evolution of Bacteria and Archaea
errANNUAL REVIEW OF MICROBIOLOGY
IF9.9
err2023-09-15
err5
errOAAI
errJaffe, Alexander L.; Castelle, Cindy J.; Banfield, Jillian F.
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errSave
Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin
errMICROBIOME
IF12.7
err2023-01-25
err8
errOAAI
errJaffe, Alexander L. L.; Bardot, Corinne; Le Jeune, Anne-Helene; Liu, Jett; Colombet, Jonathan; Perriere, Fanny; Billard, Hermine; Castelle, Cindy J. J.; Lehours, Anne-Catherine; Banfield, Jillian F. F.
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Long-Term Incubation of Lake Water Enables Genomic Sampling of Consortia Involving Planctomycetes and Candidate Phyla Radiation Bacteria
errMSYSTEMS
IF4.6
err2022-04-26
err3
errOAAI
errJaffe, Alexander L.; Fuster, Maxime; Schoelmerich, Marie C.; Chen, Lin-Xing; Colombet, Jonathan; Billard, Hermine; Sime-Ngando, Telesphore; Banfield, Jillian F.
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Saccharibacteria harness light energy using type-1 rhodopsins that may rely on retinal sourced from microbial hosts
errISME JOURNAL
IF10
err2022-04-19
err12
errOAAI
errJaffe, Alexander L.; Konno, Masae; Kawasaki, Yuma; Kataoka, Chihiro; Beja, Oded; Kandori, Hideki; Inoue, Keiichi; Banfield, Jillian F.
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errSave
Phage-encoded ribosomal protein S21 expression is linked to late-stage phage replication
errISME COMMUNICATIONS
IF6.1
err2022-03-30
err8
errOAAI
errChen, Lin-Xing; Jaffe, Alexander L.; Borges, Adair L.; Penev, Petar I.; Nelson, Tara Colenbrander; Warren, Lesley A.; Banfield, Jillian F.
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errSave
Priority effects in microbiome assembly (Aug, 10.1038/s41579-021-00604-w, 2021)
errNATURE REVIEWS MICROBIOLOGY
IF103.3
err2021-10-01
err0
errOAAI
errDebray, Reena; Herbert, Robin A.; Jaffe, Alexander L.; Crits-Christoph, Alexander; Power, Mary E.; Koskella, Britt
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errSave
Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities
errMSYSTEMS
IF4.6
err2021-08-31
err32
errOAAI
errNicolas, Alexa M.; Jaffe, Alexander L.; Nuccio, Erin E.; Taga, Michiko E.; Firestone, Mary K.; Banfield, Jillian F.
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errSave
Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria
errMBIO
IF4.7
err2021-08-31
err27
errOAAI
errJaffe, Alexander L.; Thomas, Alex D.; He, Christine; Keren, Ray; Valentin-Alvarado, Luis E.; Munk, Patrick; Bouma-Gregson, Keith; Farag, Ibrahim F.; Amano, Yuki; Sachdeva, Rohan; West, Patrick T.; Ban, Jillian F.
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errSave
Priority effects in microbiome assembly
errNATURE REVIEWS MICROBIOLOGY
IF103.3
err2021-08-27
err243
PREAI
errDebray, Reena; Herbert, Robin A.; Jaffe, Alexander L.; Crits-Christoph, Alexander; Power, Mary E.; Koskella, Britt
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errSave
Protein Family Content Uncovers Lineage Relationships and Bacterial Pathway Maintenance Mechanisms in DPANN Archaea
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2021-06-01
err16
errOAAI
errCastelle, Cindy J.; Meheust, Raphael; Jaffe, Alexander L.; Seitz, Kiley; Gong, Xianzhe; Baker, Brett J.; Banfield, Jillian F.
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errSave
Lateral Gene Transfer Shapes the Distribution of RuBisCO among Candidate Phyla Radiation Bacteria and DPANN Archaea
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2018-12-13
err51
errOAAI
errJaffe, Alexander L.; Castelle, Cindy J.; Dupont, Christopher L.; Banfield, Jillian F.
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errSave
Bipartite graph analyses reveal interdomain LGT involving ultrasmall prokaryotes and their divergent, membrane-related proteins
errENVIRONMENTAL MICROBIOLOGY
IF4
err2016-08-25
err10
errOAAI
errJaffe, Alexander L.; Corel, Eduardo; Pathmanathan, Jananan Sylvestre; Lopez, Philippe; Bapteste, Eric
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Research Directions

No research directions
Co-authors
Cooperation Journals
J
Jillian F. Banfield
H-index: 154 · Papers: 935
M
Mary K. Firestone
H-index: 98 · Papers: 362
M
Michael Manga
H-index: 82 · Papers: 823
M
Mary E. Power
H-index: 81 · Papers: 240
C
Christopher L. Dupont
H-index: 72 · Papers: 248
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