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Wu-chun Feng

Department of Computer Science

45H-index
435Paper Count
8.5KCitation Count
Published Papers 22
Publication Date
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Scalable and Maintainable Distributed Sequence Alignment Using Spark
errieee acm transactions on computational biology and bioinformatics
IF0
err2025-07-01
err0
PREAI
errKarim Youssef; Yusuf Elnady; Eli Tilevich; Wu-chun Feng
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SamBaS: Sampling-Based Stochastic Block Partitioning
errIEEE TRANSACTIONS ON NETWORK SCIENCE AND ENGINEERING
IF7.9
err2024-05-01
err0
errOAAI
errWanye, Frank; Gleyzer, Vitaliy; Kao, Edward; Feng, Wu-chun
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Identifying multi-hit carcinogenic gene combinations: Scaling up a weighted set cover algorithm using compressed binary matrix representation on a GPU
errSCIENTIFIC REPORTS
IF3.9
err2020-02-06
err6
errOAAI
errAl Hajri, Qais; Dash, Sajal; Feng, Wu-chun; Garner, Harold R.; Anandakrishnan, Ramu
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Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations (vol 9, 1005, 2019)
errSCIENTIFIC REPORTS
IF3.9
err2019-12-09
err0
errOAAI
errDash, Sajal; Kinney, Nicholas A.; Varghese, Robin T.; Garner, Harold R.; Feng, Wu-chun; Anandakrishnan, Ramu
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errSave
Differentiating between cancer and normal tissue samples using multi-hit combinations of genetic mutations
errSCIENTIFIC REPORTS
IF3.9
err2019-01-30
err22
errOAAI
errDash, Sajal; Kinney, Nicholas A.; Varghese, Robin T.; Garner, Harold R.; Feng, Wu-chun; Anandakrishnan, Ramu
errShare
errSave
A Framework for the Automatic Vectorization of Parallel Sort on x86-Based Processors
errIEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS
IF6
err2018-05-01
err6
errOAAI
errHou, Kaixi; Wang, Hao; Feng, Wu-Chun
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errSave
cuBLASTP: Fine-Grained Parallelization of Protein Sequence Search on CPU plus GPU
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2017-07-01
err11
errOAAI
errZhang, Jing; Wang, Hao; Feng, Wu-chun
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errSave
A runtime estimation framework for ALICE
errFUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE
IF6.1
err2017-07-01
err12
PREAI
errPumma, Sarunya; Feng, Wu-chun; Phunchongharn, Phond; Chapeland, Sylvain; Achalakul, Tiranee
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errSave
Parallel programming with pictures is a Snap!
errJOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING
IF4
err2017-07-01
err20
PREAI
errFeng, Annette; Gardner, Mark; Fenga, Wu-Chun
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errSave
MPI-ACC: Accelerator-Aware MPI for Scientific Applications
errIEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS
IF6
err2016-05-01
err14
errOAAI
errAji, Ashwin M.; Panwar, Lokendra S.; Ji, Feng; Murthy, Karthik; Chabbi, Milind; Balaji, Pavan; Bisset, Keith R.; Dinan, James; Feng, Wu-chun; Mellor-Crummey, John; Ma, Xiaosong; Thakur, Rajeev
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errSave
Fast Detection of Transformed Data Leaks
errIEEE TRANSACTIONS ON INFORMATION FORENSICS AND SECURITY
IF8
err2016-03-01
err43
errOAAI
errShu, Xiaokui; Zhang, Jing; Yao, Danfeng (Daphne); Feng, Wu-Chun
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errSave
CoreTSAR: Core Task-Size Adapting Runtime
errIEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS
IF6
err2015-11-01
err11
errOAAI
errScogland, Thomas R. W.; Feng, Wu-Chun; Rountree, Barry; de Supinski, Bronis R.
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errSave
Accelerating Bioinformatics Applications via Emerging Parallel Computing Systems
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2015-09-01
err0
errOAAI
errGomez-Pulido, Juan A.; Schmidt, Bertil; Feng, Wu-chun
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errSave
Wideband Channelization for Software-Defined Radio via Mobile Graphics Processors
err2013 19TH IEEE INTERNATIONAL CONFERENCE ON PARALLEL AND DISTRIBUTED SYSTEMS (ICPADS 2013)
IF0
err2013-12-01
err4
PREAI
errAdhinarayanan, Vignesh; Feng, Wu-chun
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errSave
High-performance biocomputing for simulating the spread of contagion over large contact networks
errBMC GENOMICS
IF3.7
err2012-01-01
err8
errOAAI
errBisset, Keith R.; Aji, Ashwin M.; Marathe, Madhav V.; Feng, Wu-chun
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errSave
Coordinating Computation and I/O in Massively Parallel Sequence Search
errIEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS
IF6
err2011-04-01
err37
errOAAI
errLin, Heshan; Ma, Xiaosong; Feng, Wuchun; Samatova, Nagiza F.
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errSave
Reliable MapReduce computing on opportunistic resources
errCLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS
IF4.1
err2011-02-27
err14
PREAI
errLin, Heshan; Ma, Xiaosong; Feng, Wu-chun
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errSave
Algorithms for integrated routing and scheduling for aggregating data from distributed resources on a lambda grid
errIEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS
IF6
err2008-01-01
err24
errOAAI
errBanerjee, Amitabha; Feng, Wu-Chun; Ghosal, Dipak; Mukherjee, Biswanath
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errSave
Anatomy of UDP and M-VIA for cluster communication
errJOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING
IF4
err2005-10-01
err6
PREAI
errZhang, X; Bhuyan, LN; Feng, WC
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errSave
Analyzing MPI performance over 10-Gigabit ethernet
errJOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING
IF4
err2005-10-01
err12
PREAI
errHurwitz, J; Feng, WC
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errSave

Research Directions

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Co-authors
Cooperation Journals
J
John C. Doyle
H-index: 90 · Papers: 486
S
Steven H. Low
H-index: 87 · Papers: 554
S
S. Chapeland
H-index: 78 · Papers: 546
B
Biswanath Mukherjee
H-index: 78 · Papers: 759
王浩 cover
王浩 (Hao Wang)
H-index: 76 · Papers: 2.0K
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