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Coleman, Ben; Casiraghi, Elena; Callahan, Tiffany J.; Blau, Hannah; Chan, Lauren E.; Laraway, Bryan; Clark, Kevin B.; Re'em, Yochai; Gersing, Ken R.; Wilkins, Kenneth J.; Harris, Nomi L.; Valentini, Giorgio; Haendel, Melissa A.; Reese, Justin T.; Robinson, Peter N. Share Save The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human diseaseCarmody, Leigh C.; Gargano, Michael A.; Toro, Sabrina; Vasilevsky, Nicole A.; Adam, Margaret P.; Blau, Hannah; Chan, Lauren E.; Gomez-Andres, David; Horvath, Rita; Kraus, Megan L.; Ladewig, Markus S.; Lewis-Smith, David; Lochmueller, Hanns; Matentzoglu, Nicolas A.; Munoz-Torres, Monica C.; Schuetz, Catharina; Seitz, Berthold; Similuk, Morgan N.; Sparks, Teresa N.; Strauss, Timmy; Swietlik, Emilia M.; Thompson, Rachel; Zhang, Xingmin Aaron; Mungall, Christopher J.; Haendel, Melissa A.; Robinson, Peter N. Share Save The Human Phenotype Ontology in 2024: phenotypes around the worldGargano, Michael A.; Matentzoglu, Nicolas; Coleman, Ben; Addo-Lartey, Eunice B.; Anagnostopoulos, Anna, V; Anderton, Joel; Avillach, Paul; Bagley, Anita M.; Bakstein, Eduard; Balhoff, James P.; Baynam, Gareth; Bello, Susan M.; Berk, Michael; Bertram, Holli; Bishop, Somer; Blau, Hannah; Bodenstein, David F.; Botas, Pablo; Boztug, Kaan; Cady, Jolana; Callahan, Tiffany J.; Cameron, Rhiannon; Carbon, Seth J.; Castellanos, Francisco; Caufield, J. Harry; Chan, Lauren E.; Chute, Christopher G.; Cruz-Rojo, Jaime; Dahan-Oliel, Noemi; Davids, Jon R.; de Dieuleveult, Maud; de Souza, Vinicius; de Vries, Bert B. A.; de Vries, Esther; DePaulo, J. Raymond; Derfalvi, Beata; Dhombres, Ferdinand; Diaz-Byrd, Claudia; Dingemans, Alexander J. M.; Donadille, Bruno; Duyzend, Michael; Elfeky, Reem; Essaid, Shahim; Fabrizzi, Carolina; Fico, Giovanna; Firth, Helen, V; Freudenberg-Hua, Yun; Fullerton, Janice M.; Gabriel, Davera L.; Gilmour, Kimberly; Giordano, Jessica; Goes, Fernando S.; Moses, Rachel Gore; Green, Ian; Griese, Matthias; Groza, Tudor; Gu, Weihong; Guthrie, Julia; Gyori, Benjamin; Hamosh, Ada; Hanauer, Marc; Hanusova, Katerina; He, Yongqun (Oliver); Hegde, Harshad; Helbig, Ingo; Holasova, Katerina; Hoyt, Charles Tapley; Huang, Shangzhi; Hurwitz, Eric; Jacobsen, Julius O. B.; Jiang, Xiaofeng; Joseph, Lisa; Keramatian, Kamyar; King, Bryan; Knoflach, Katrin; Koolen, David A.; Kraus, Megan L.; Kroll, Carlo; Kusters, Maaike; Ladewig, Markus S.; Lagorce, David; Lai, Meng-Chuan; Lapunzina, Pablo; Laraway, Bryan; Lewis-Smith, David; Li, Xiarong; Lucano, Caterina; Majd, Marzieh; Marazita, Mary L.; Martinez-Glez, Victor; McHenry, Toby H.; McInnis, Melvin G.; McMurry, Julie A.; Mihulova, Michaela; Millett, Caitlin E.; Mitchell, Philip B.; Moslerova, Veronika; Narutomi, Kenji; Nematollahi, Shahrzad; Nevado, Julian; Nierenberg, Andrew A.; Cajbikova, Nikola Novak; Nurnberger, John I., Jr.; Ogishima, Soichi; Olson, Daniel; Ortiz, Abigail; Pachajoa, Harry; Perez de Nanclares, Guiomar; Peters, Amy; Putman, Tim; Rapp, Christina K.; Rath, Ana; Reese, Justin; Rekerle, Lauren; Roberts, Angharad M.; Roy, Suzy; Sanders, Stephan J.; Schuetz, Catharina; Schulte, Eva C.; Schulze, Thomas G.; Schwarz, Martin; Scott, Katie; Seelow, Dominik; Seitz, Berthold; Shen, Yiping; Similuk, Morgan N.; Simon, Eric S.; Singh, Balwinder; Smedley, Damian; Smith, Cynthia L.; Smolinsky, Jake T.; Sperry, Sarah; Stafford, Elizabeth; Stefancsik, Ray; Steinhaus, Robin; Strawbridge, Rebecca; Sundaramurthi, Jagadish Chandrabose; Talapova, Polina; Tenorio Castano, Jair A.; Tesner, Pavel; Thomas, Rhys H.; Thurm, Audrey; Turnovec, Marek; van Gijn, Marielle E.; Vasilevsky, Nicole A.; Vlckova, Marketa; Walden, Anita; Wang, Kai; Wapner, Ron; Ware, James S.; Wiafe, Addo A.; Wiafe, Samuel A.; Wiggins, Lisa D.; Williams, Andrew E.; Wu, Chen; Wyrwoll, Margot J.; Xiong, Hui; Yalin, Nefize; Yamamoto, Yasunori; Yatham, Lakshmi N.; Yocum, Anastasia K.; Young, Allan H.; Yueksel, Zafer; Zandi, Peter P.; Zankl, Andreas; Zarante, Ignacio; Zvolsky, Miroslav; Toro, Sabrina; Carmody, Leigh C.; Harris, Nomi L.; Munoz-Torres, Monica C.; Danis, Daniel; Mungall, Christopher J.; Koehler, Sebastian; Haendel, Melissa A.; Robinson, Peter N. Share Save Predictive models of long COVIDAntony, Blessy; Blau, Hannah; Casiraghi, Elena; Loomba, Johanna J.; Callahan, Tiffany J.; Laraway, Bryan J.; Wilkins, Kenneth J.; Antonescu, Corneliu C.; Valentini, Giorgio; Williams, Andrew E.; Robinson, Peter N.; Reese, Justin T.; Murali, T. M. Share Save A method for comparing multiple imputation techniques: A case study on the US national COVID cohort collaborativeCasiraghi, Elena; Wong, Rachel; Hall, Margaret; Coleman, Ben; Notaro, Marco; Evans, Michael D.; Tronieri, Jena S.; Blau, Hannah; Laraway, Bryan; Callahan, Tiffany J.; Chan, Lauren E.; Bramante, Carolyn T.; Buse, John B.; Moffitt, Richard A.; Sturmer, Til; Johnson, Steven G.; Shao, Yu Raymond; Reese, Justin; Robinson, Peter N.; Paccanaro, Alberto; Valentini, Giorgio; Huling, Jared D.; Wilkins, Kenneth J. Share Save Generalisable long COVID subtypes: Findings from the NIH N3C and RECOVER programmesReese, Justin T.; Blau, Hannah; Casiraghi, Elena; Bergquist, Timothy; Loomba, Johanna J.; Callahan, Tiffany J.; Laraway, Bryan; Antonescu, Corneliu; Coleman, Ben; Gargano, Michael; Wilkins, Kenneth J.; Cappelletti, Luca; Fontana, Tommaso; Ammar, Nariman; Antony, Blessy; Murali, T. M.; Caufield, J. Harry; Karlebach, Guy; McMurry, Julie A.; Williams, Andrew; Moffitt, Richard; Banerjee, Jineta; Solomonides, Anthony E.; Davis, Hannah; Kostka, Kristin; Valentini, Giorgio; Sahner, David; Chute, Christopher G.; Madlock-Brown, Charisse; Haendel, Melissa A.; Robinson, Peter N. Share Save Metformin is associated with reduced COVID-19 severity in patients with prediabetesChan, Lauren E.; Casiraghi, Elena; Laraway, Bryan; Coleman, Ben; Blau, Hannah; Zaman, Adnin; Harris, Nomi L.; Wilkins, Kenneth; Antony, Blessy; Gargano, Michael; Valentini, Giorgio; Sahner, David; Haendel, Melissa; Robinson, Peter N.; Bramante, Carolyn; Reese, Justin Share Save NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort studyReese, Justin T.; Coleman, Ben; Chan, Lauren; Blau, Hannah; Callahan, Tiffany J.; Cappelletti, Luca; Fontana, Tommaso; Bradwell, Katie Rebecca; Harris, Nomi L.; Casiraghi, Elena; Valentini, Giorgio; Karlebach, Guy; Deer, Rachel; McMurry, Julie A.; Haendel, Melissa A.; Chute, Christopher G.; Pfaff, Emily; Moffitt, Richard; Spratt, Heidi; Singh, Jasvinder; Mungall, Christopher J.; Williams, Andrew E.; Robinson, Peter N. Share Save Risk of new-onset psychiatric sequelae of COVID-19 in the early and late post-acute phaseColeman, Ben; Casiraghi, Elena; Blau, Hannah; Chan, Lauren; Haendel, Melissa A.; Laraway, Bryan; Callahan, Tiffany J.; Deer, Rachel R.; Wilkins, Kenneth J.; Reese, Justin; Robinson, Peter N. Share Save Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancerRavanmehr, Vida; Blau, Hannah; Cappelletti, Luca; Fontana, Tommaso; Carmody, Leigh; Coleman, Ben; George, Joshy; Reese, Justin; Joachimiak, Marcin; Bocci, Giovanni; Hansen, Peter; Bult, Carol; Rueter, Jens; Casiraghi, Elena; Valentini, Giorgio; Mungall, Christopher; Oprea, Tudor, I; Robinson, Peter N. Share Save KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 ResponseReese, Justin T.; Unni, Deepak; Callahan, Tiffany J.; Cappelletti, Luca; Ravanmehr, Vida; Carbon, Seth; Shefchek, Kent A.; Good, Benjamin M.; Balhoff, James P.; Fontana, Tommaso; Blau, Hannah; Matentzoglu, Nicolas; Harris, Nomi L.; Munoz-Torres, Monica C.; Haendel, Melissa A.; Robinson, Peter N.; Joachimiak, Marcin P.; Mungall, Christopher J. Share Save Share Save The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across speciesShefchek, Kent A.; Harris, Nomi L.; Gargano, Michael; Matentzoglu, Nicolas; Unni, Deepak; Brush, Matthew; Keith, Daniel; Conlin, Tom; Vasilevsky, Nicole; Zhang, Xingmin Aaron; Balhoff, James P.; Babb, Larry; Bello, Susan M.; Blau, Hannah; Bradford, Yvonne; Carbon, Seth; Carmody, Leigh; Chan, Lauren E.; Cipriani, Valentina; Cuzick, Alayne; Della Rocca, Maria; Dunn, Nathan; Essaid, Shahim; Fey, Petra; Grove, Chris; Gourdine, Jean-Phillipe; Hamosh, Ada; Harris, Midori; Helbig, Ingo; Hoatlin, Maureen; Joachimiak, Marcin; Jupp, Simon; Lett, Kenneth B.; Lewis, Suzanna E.; McNamara, Craig; Pendlington, Zoe M.; Pilgrim, Clare; Putman, Tim; Ravanmehr, Vida; Reese, Justin; Riggs, Erin; Robb, Sofia; Roncaglia, Paola; Seager, James; Segerdell, Erik; Similuk, Morgan; Storm, Andrea L.; Thaxon, Courtney; Thessen, Anne; Jacobsen, Julius O. B.; McMurry, Julie A.; Groza, Tudor; Koehler, Sebastian; Smedley, Damian; Robinson, Peter N.; Mungall, Christopher J.; Haendel, Melissa A.; Munoz-Torres, Monica C.; Osumi-Sutherland, David Share Save GOPHER: Generator Of Probes for capture Hi-C Experiments at high ResolutionHansen, Peter; Ali, Salaheddine; Blau, Hannah; Danis, Daniel; Hecht, Jochen; Kornak, Uwe; Lupianez, Dario G.; Mundlos, Stefan; Steinhaus, Robin; Robinson, Peter N. Share Save Expansion of the Human Phenotype Ontology (HPO) knowledge base and resourcesKoehler, Sebastian; Carmody, Leigh; Vasilevsky, Nicole; Jacobsen, Julius O. B.; Danis, Daniel; Gourdine, Jean-Philippe; Gargano, Michael; Harris, Nomi L.; Matentzoglu, Nicolas; McMurry, Julie A.; Osumi-Sutherland, David; Cipriani, Valentina; Balhoff, James P.; Conlin, Tom; Blau, Hannah; Baynam, Gareth; Palmer, Richard; Gratian, Dylan; Dawkins, Hugh; Segal, Michael; Jansen, Anna C.; Muaz, Ahmed; Chang, Willie H.; Bergerson, Jenna; Laulederkind, Stanley J. F.; Yueksel, Zafer; Beltran, Sergi; Freeman, Alexandra F.; Sergouniotis, Panagiotis I.; Durkin, Daniel; Storm, Andrea L.; Hanauer, Marc; Brudno, Michael; Bello, Susan M.; Sincan, Murat; Rageth, Kayli; Wheeler, Matthew T.; Oegema, Renske; Lourghi, Halima; Della Rocca, Maria G.; Thompson, Rachel; Castellanos, Francisco; Priest, James; Cunningham-Rundles, Charlotte; Hegde, Ayushi; Lovering, Ruth C.; Hajek, Catherine; Olry, Annie; Notarangelo, Luigi; Similuk, Morgan; Zhang, Xingmin A.; Gomez-Andres, David; Lochmueller, Hanns; Dollfus, Helene; Rosenzweig, Sergio; Marwaha, Shruti; Rath, Ana; Sullivan, Kathleen; Smith, Cynthia; Milner, Joshua D.; Leroux, Dorothee; Boerkoel, Cornelius F.; Klion, Amy; Carter, Melody C.; Groza, Tudor; Smedley, Damian; Haendel, Melissa A.; Mungall, Chris; Robinson, Peter N. Share Save 
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