Not logged in A TROP2/Claudin program mediates immune exclusion to impede checkpoint blockade in breast cancer Wu, Bogang; Thant, Win; Bitman, Elena; Liu, Ting; Liu, Jie; Ilios, Eleftherios Paschalis; Xu, Katherine; Nieman, Linda; Ting, David; Thimmiah, Nayana; Sun, Sheng; Abelman, Rachel; Isakoff, Steven; Spring, Laura; Bardia, Aditya; Ellisen, Leif Share Save
Cancer cells restrict immunogenicity of retrotransposon expression via distinct mechanisms Sun, Siyu; You, Eunae; Hong, Jungeui; Hoyos, David; Del Priore, Isabella; Tsanov, Kaloyan M.; Mattagajasingh, Om; Di Gioacchino, Andrea; Marhon, Sajid A.; Chacon-Barahona, Jonathan; Li, Hao; Jiang, Hua; Hozeifi, Samira; Rosas-Bringas, Omar; Xu, Katherine H.; Song, Yuhui; Lang, Evan R.; Rojas, Alexandra S.; Nieman, Linda T.; Patel, Bidish K.; Murali, Rajmohan; Chanda, Pharto; Karacay, Ali; Vabret, Nicolas; De Carvalho, Daniel D.; Zenklusen, Daniel; Lacava, John; Lowe, Scott W.; Ting, David T.; lacobuzio-Donahue, Christine A.; Solovyov, Alexander; Greenbaum, Benjamin D. Share Save
LINE-1 ORF1p mimics viral innate immune evasion mechanisms in pancreatic cancer You, Eunae; Patel, Bidish; Rojas, Alexandra; Sun, Siyu; Ho, Natalie; Phillips, Ildiko; Raabe, Michael; Song, Yuhui; Xu, Katherine; Kocher, Joshua; Richieri, Peter; Taylor, Martin; Nieman, Linda; Greenbaum, Benjamin; Ting, David Share Save
Repeat RNA mediated disruption of cellular plasticity in pancreatic cancer You, Eunae; Danaher, Patrick; Lu, Chenyue; Sun, Siyu; Zou, Luli; Phillips, Ildiko; Rojas, Alexandra; Ho, Natalie; Song, Yuhui; Raabe, Michael; Xu, Katherine; Richieri, Peter; Li, Hao; Aston, Natalie; Porter, Rebecca; Patel, Bidish; Nieman, Linda; Schurman, Nathan; Hudson, Briana; North, Khrystyna; Church, Sarah; Deshpande, Vikram; Liss, Andrew; Kim, Tae; Cui, Yi; Kim, Youngmi; Greenbaum, Benjamin; Aryee, Martin; Ting, David Share Save
Spatial Transcriptomics Unveils Intraductal Papillary Mucinous Neoplasm Heterogeneity: From Novel Clusters to Immune Dynamics Pankaj, Amaya; Raabe, Michael J.; Song, Yuhui; Patel, Bidish K.; Xu, Katherine; Kocher, Joshua R.; Caldwell, Nicholas J.; Ganci, Maria L.; Nieman, Linda T.; Mino-Kenudson, Mari; Deshpande, Vikram; Bardeesy, Nabeel; Fernandez-Del Castillo, Carlos; Aryee, Martin J.; Ting, David T.; Hernandez-Barco, Yasmin G. Share Save
Single-cell transcriptomic analyses reveal distinct immune cell contributions to epithelial barrier dysfunction in checkpoint inhibitor colitis Thomas, Molly Fisher; Slowikowski, Kamil; Manakongtreecheep, Kasidet; Sen, Pritha; Samanta, Nandini; Tantivit, Jessica; Nasrallah, Mazen; Zubiri, Leyre; Smith, Neal P.; Tirard, Alice; Ramesh, Swetha; Arnold, Benjamin Y.; Nieman, Linda T.; Chen, Jonathan H.; Eisenhaure, Thomas; Pelka, Karin; Song, Yuhui; Xu, Katherine H.; Jorgji, Vjola; Pinto, Christopher J.; Sharova, Tatyana; Glasser, Rachel; Chan, Puiyee; Sullivan, Ryan J.; Khalili, Hamed; Juric, Dejan; Boland, Genevieve M.; Dougan, Michael; Hacohen, Nir; Li, Bo; Reynolds, Kerry L.; Villani, Alexandra-Chloe Share Save
T-cell responses across heart, blood, and tumor in patients with immune checkpoint inhibitor-related myocarditis (irMyocarditis) Blum, Steven; Zlotoff, Daniel A.; Smith, Neal P.; Kernin, Isabela J.; Ramesh, Swetha; Oliveira, Giacomo; Zubiri, Leyre; Caplin, Joshua; Samanta, Nandini; Martin, Sidney; Wang, Mike; Tirard, Alice; Sen, Pritha; Song, Yuhui; Xu, Katherine; Barth, Jaimie L.; Slowikowski, Kamil; Nasrallah, Mazen; Tantivit, Jessica; Manakongtreecheep, Kasidet; Arnold, Benjamin Y.; McGuire, John; Afeyan, Alexander B.; Pinto, Christopher J.; McLoughlin, Daniel; Jackson, Monica; Chan, PuiYee; Lawless, Aleigha; Michaud, William A.; Sharova, Tatyana; Nieman, Linda T.; Gainor, Justin F.; Juric, Dejan; Mino-Kenudsen, Mari; Sullivn, Ryan J.; Boland, Genevieve M.; Stone, James R.; Wu, Catherine J.; Thomas, Molly F.; Neilan, Tomas G.; Reynolds, Kerry L.; Villani, Alexandra-Chloe Share Save
Dissecting pancreatic cancer tumor- immune microenvironment crosstalk using spatial transcriptomics Pankaj, Amaya; Raabe, Michael J.; Patel, Bidish K.; Lang, Evan R.; Kocher, Joshua R.; Xu, Katherine H.; Nieman, Linda T.; Hwang, William L.; Kimmelman, Alec C.; Ryan, David P.; Hong, Theodore S.; Aryee, Martin J.; Ting, David T. Share Save
Human LINE-1 ORF1p retrotransposition independent function in pancreatic cancer You, Eunae; Patel, Bidish; Rojas, Alexandra; Ho, Natalie; Sun, Siyu; Raabe, Michael; Song, Yuhui; Phillips, Ildiko; Xu, Katherine; Richieri, Peter; Nieman, Linda; Greenbaum, Benjamin; Ting, David Share Save
Human lung cancer harbors spatially organized stem-immunity hubs associated with response to immunotherapy Chen, Jonathan H.; Nieman, Linda T.; Spurrell, Maxwell; Jorgji, Vjola; Elmelech, Liad; Richieri, Peter; Xu, Katherine H.; Madhu, Roopa; Parikh, Milan; Zamora, Izabella; Mehta, Arnav; Nabel, Christopher S.; Freeman, Samuel S.; Pirl, Joshua D.; Lu, Chenyue; Meador, Catherine B.; Barth, Jaimie L.; Sakhi, Mustafa; Tang, Alexander L.; Sarkizova, Siranush; Price, Colles; Fernandez, Nicolas F.; Emanuel, George; He, Jiang; Van Raay, Katrina; Reeves, Jason W.; Yizhak, Keren; Hofree, Matan; Shih, Angela; Sade-Feldman, Moshe; Boland, Genevieve M.; Pelka, Karin; Aryee, Martin J.; Mino-Kenudson, Mari; Gainor, Justin F.; Korsunsky, Ilya; Hacohen, Nir Share Save
Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific Multicancer Biomarker Taylor, Martin S.; Wu, Connie; Fridy, Peter C.; Zhang, Stephanie J.; Senussi, Yasmeen; Wolters, Justina C.; Cajuso, Tatiana; Cheng, Wen-Chih; Heaps, John D.; Miller, Bryant D.; Mori, Kei; Cohen, Limor; Jiang, Hua; Molloy, Kelly R.; Chait, Brian T.; Goggins, Michael G.; Bhan, Irun; Franses, Joseph W.; Yang, Xiaoyu; Taplin, Mary-Ellen; Wang, Xinan; Christiani, David C.; Johnson, Bruce E.; Meyerson, Matthew; Uppaluri, Ravindra; Egloff, Ann Marie; Denault, Elyssa N.; Spring, Laura M.; Wang, Tian-Li; Shih, Ie-Ming; Fairman, Jennifer E.; Jung, Euihye; Arora, Kshitij S.; Yilmaz, Osman H.; Cohen, Sonia; Sharova, Tatyana; Chi, Gary; Norden, Bryanna L.; Song, Yuhui; Nieman, Linda T.; Pappas, Leontios; Parikh, Aparna R.; Strickland, Matthew R.; Corcoran, Ryan B.; Mustelin, Tomas; Eng, George; Yilmaz, OEmer H.; Matulonis, Ursula A.; Chan, Andrew T.; Skates, Steven J.; Rueda, Bo R.; Drapkin, Ronny; Klempner, Samuel J.; Deshpande, Vikram; Ting, David T.; Rout, Michael P.; LaCava, John; Walt, David R.; Burns, Kathleen H. Share Save
Share Save
TGF β in the microenvironment induces a physiologically occurring immune-suppressive senescent state Matsuda, Satoru; Revandkar, Ajinkya; Dubash, Taronish D.; Ravi, Arvind; Wittner, Ben S.; Lin, Maoxuan; Morris, Robert; Burr, Risa; Guo, Hongshan; Seeger, Karsen; Szabolcs, Annamaria; Che, Dante; Nieman, Linda; Getz, Gad A.; Ting, David T.; Lawrence, Michael S.; Gainor, Justin; Haber, Daniel A.; Maheswaran, Shyamala Share Save
Characterizing the effects of neoadjuvant therapy in PDAC Pankaj, Amaya; Raabe, Michael J.; Patel, Bidish; Lang, Evan R.; Kocher, Joshua; Xu, Katherine H.; Nieman, Linda T.; Kimmelman, Alec C.; Ryan, David P.; Hong, Theodore S.; Hwang, William L.; Aryee, Martin; Ting, David T. Share Save
Satellite repeat RNA expression in epithelial ovarian cancer associates with a tumor-immunosuppressive phenotype Porter, Rebecca L.; Sun, Siyu; Flores, Micayla N.; Berzolla, Emily; You, Eunae; Phillips, Ildiko E.; Neelima, K. C.; Desai, Niyati; Tai, Eric C.; Szabolcs, Annamaria; Lang, Evan R.; Pankaj, Amaya; Raabe, Michael J.; Thapar, Vishal; Xu, Katherine H.; Nieman, Linda T.; Rabe, Daniel C.; Kolin, David L.; Stover, Elizabeth H.; Pepin, David; Stott, Shannon L.; Deshpande, Vikram; Liu, Joyce F.; Solovyov, Alexander; Matulonis, Ursula A.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer Rajurkar, Mihir; Parikh, Aparna R.; Solovyov, Alexander; You, Eunae; Kulkarni, Anupriya S.; Chu, Chong; Xu, Katherine H.; Jaicks, Christopher; Taylor, Martin S.; Wu, Connie; Alexander, Katherine A.; Good, Charly R.; Szabolcs, Annamaria; Gerstberger, Stefanie; V. Tran, Antuan; Xu, Nova; Ebright, Richard Y.; Van Seventer, Emily E.; Vo, Kevin; Tai, Eric C.; Lu, Chenyue; Joseph-Chazan, Jasmin; Raabe, Michael J.; Nieman, Linda T.; Desai, Niyati; Arora, Kshitij S.; Ligorio, Matteo; Thapar, Vishal; Cohen, Limor; Garden, Padric M.; Senussi, Yasmeen; Zheng, Hui; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Goyal, Lipika; Wo, Jennifer Y.; Ryan, David P.; Corcoran, Ryan B.; Deshpande, Vikram; Rivera, Miguel N.; Aryee, Martin J.; Hong, Theodore S.; Berger, Shelley L.; Walt, David R.; Burns, Kathleen H.; Park, Peter J.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Active RB causes visible changes in nuclear organization Krishnan, Badri; Yasuhara, Takaaki; Rumde, Purva; Stanzione, Marcello; Lu, Chenyue; Lee, Hanjun; Lawrence, Michael S.; Zou, Lee; Nieman, Linda T.; Sanidas, Ioannis; Dyson, Nicholas J. Share Save
Selective targeting of MYC mRNA by stabilized antisense oligonucleotides Gill, Taylor; Wang, Haichuan; Bandaru, Raj; Lawlor, Matthew; Lu, Chenyue; Nieman, Linda T.; Tao, Junyan; Zhang, Yixian; Anderson, Daniel G.; Ting, David T.; Chen, Xin; Bradner, James E.; Ott, Christopher J. Share Save
NR4A1 regulates expression of immediate early genes, suppressing replication stress in cancer Guo, Hongsha; Golczer, Gabriel; Wittner, Ben S.; Langenbucher, Adam; Zachariah, Marcus; Dubash, Taronish D.; Hong, Xin; Comaills, Valentine; Burr, Risa; Ebright, Richard Y.; Horwitz, Elad; Vuille, Joanna A.; Hajizadeh, Soroush; Wiley, Devon F.; Reeves, Brittany A.; Zhang, Jia-min; Niederhoffer, Kira L.; Lu, Chenyue; Wesley, Benjamin; Ho, Uyen; Nieman, Linda T.; Toner, Mehmet; Vasudevan, Shobha; Zou, Lee; Mostoslavsky, Raul; Maheswaran, Shyamala; Lawrence, Michael S.; Harber, Daniel A. Share Save
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
Share.png){kind=icon}
Save
Not logged in.png){kind=icon}