logo
CanyamAI summaries for academic research
language
MobileMobile
  • Phone FeatureWeChat Mini Program
EnglishEnglish
noticeNotice
BlogBlog
delete
arrow
Back
M

Malte D. Luecken

university of technology sydney

25H-index
68Paper Count
7.3KCitation Count
Published Papers 28
Publication Date
logo
Author Correction: Single-cell atlas of the transcriptome and chromatin accessibility in the human retina
errNature Genetics
IF29
err2026-02-18
err0
PREAI
errJin Li; Jun Wang; Ignacio L. Ibarra; Xuesen Cheng; Malte D. Luecken; Jiaxiong Lu; Aboozar Monavarfeshani; Wenjun Yan; Yiqiao Zheng; Zhen Zuo; Samantha Lynn Zayas Colborn; Berenice Sarahi Cortez; Leah A. Owen; Brittney Wick; Xuan Bao; Jongsu Choi; Maximilian Haeussler; Nicholas M. Tran; Karthik Shekhar; Joshua R. Sanes; J. Timothy Stout; Shiming Chen; Yumei Li; Margaret M. DeAngelis; Fabian J. Theis; Rui Chen
errShare
errSave
Toward informed batch correction for single-cell transcriptome integration
errNature Computational Science
IF18.3
err2026-02-16
err0
PREAI
errShuang Li; Malte Lücken; John C. Marioni; Sarah A. Teichmann; Peng He
errShare
errSave
Single-cell atlas of the transcriptome and chromatin accessibility in the human retina
errNature Genetics
IF29
err2026-01-23
err0
PREAI
errJin Li; Jun Wang; Ignacio L. Ibarra; Xuesen Cheng; Malte D. Luecken; Jiaxiong Lu; Aboozar Monavarfeshani; Wenjun Yan; Yiqiao Zheng; Zhen Zuo; Samantha Lynn Zayas Colborn; Berenice Sarahi Cortez; Leah A. Owen; Brittney Wick; Xuan Bao; Maximilian Haeussler; Nicholas M. Tran; Karthik Shekhar; Joshua R. Sanes; J. Timothy Stout; Shiming Chen; Yumei Li; Margaret M. DeAngelis; Fabian J. Theis; Rui Chen
errShare
errSave
Single-cell characterization of the adult male hippocampus suggests a prominent, and cell-type specific, role for Nrgn and Sgk1 in response to a social stressor
errMolecular Psychiatry
IF10.1
err2026-01-19
err0
errOAAI
errCarlo De Donno; Juan Pablo Lopez; Malte D. Luecken; Aron Kos; Elena Brivio; Joeri Bordes; Huanqing Yang; Jan M. Deussing; Mathias V. Schmidt; Fabian J. Theis; Alon Chen
errShare
errSave
Multi-omics to study chronic respiratory diseases and viral infections
errEuropean Respiratory Review
IF10.4
err2026-01-01
err2
PREAI
errIdrees, Sobia; Chen, Hao; Sadaf, Tayyaba; Rehman, Saima Firdous; Johansen, Matt D.; Paudel, Keshav Raj; Liu, Gang; Wang, Yuting; Luecken, Malte D.; Hortle, Elinor; Philp, Ashleigh S.; Budden, Kurtis F.; O'rourke, Matthew; Kaiko, Gerard E.; Lucas, Sionne E. M.; Dickinson, Joanne L.; Allen, Peter C.; Powell, Joseph E.; Zhang, Lai-Ying; Chambers, Daniel C.; Corte, Tamera; Caramori, Gaetano; Sauler, Maor; Wark, Peter A.; Gote-Schniering, Janine; Lehmann, Mareike; Conlon, Thomas M.; Kapellos, Theodore S.; Yildirim, Ali Onder; Faner, Rosa; Dharmage, Shyamali C.; Wheelock, Craig E.; Van Den Berge, Maarten; Nawijn, Martijn C.; Polverino, Francesca; Belz, Gabrielle T.; Chotirmall, Sanjay H.; Segal, Leopoldo N.; Faiz, Alen; Hansbro, Philip M.
errShare
errSave
Spatial single-cell atlas reveals regional variations in healthy and diseased human lung
errNature Communications
IF15.7
err2025-11-05
err0
errOAAI
errAlexandra B. Firsova; Sergio Marco Salas; Louis B. Kuemmerle; Xesús M. Abalo; Alexandros Sountoulidis; Ludvig Larsson; Krishnaa T. Mahbubani; Jonas Theelke; Zaneta Andrusivova; Leire Alonso Galicia; Andreas Liontos; Tamás Balassa; Ferenc Kovacs; Peter Horvath; Yuexin Chen; Janine Gote-Schniering; Mircea-Gabriel Stoleriu; Jürgen Behr; Kerstin B. Meyer; Wim Timens; Herbert B. Schiller; Malte D. Luecken; Fabian J. Theis; Joakim Lundeberg; Mats Nilsson; Martijn C. Nawijn; Christos Samakovlis
errShare
errSave
Defining and benchmarking open problems in single-cell analysis
errNature Biotechnology
IF41.7
err2025-07-01
err0
errOAAI
errMalte D. Luecken; Scott Gigante; Daniel B. Burkhardt; Robrecht Cannoodt; Daniel C. Strobl; Nikolay S. Markov; Luke Zappia; Giovanni Palla; Wesley Lewis; Daniel Dimitrov; Michael E. Vinyard; D. S. Magruder; Michaela F. Mueller; Alma Andersson; Emma Dann; Qian Qin; Dominik J. Otto; Michal Klein; Olga Borisovna Botvinnik; Louise Deconinck; Kai Waldrant; Sai Nirmayi Yasa; Artur Szałata; Andrew Benz; Zhijian Li; Jonathan M. Bloom; Angela Oliveira Pisco; Julio Saez-Rodriguez; Drausin Wulsin; Luca Pinello; Yvan Saeys; Fabian J. Theis; Smita Krishnaswamy
errShare
errSave
Feature selection methods affect the performance of scRNA-seq data integration and querying
errNature Methods
IF32.1
err2025-03-13
err0
errOAAI
errLuke Zappia; Sabrina Richter; Ciro Ramírez-Suástegui; Raphael Kfuri-Rubens; Larsen Vornholz; Weixu Wang; Oliver Dietrich; Amit Frishberg; Malte D. Luecken; Fabian J. Theis
errShare
errSave
Biases in machine-learning models of human single-cell data
errNATURE CELL BIOLOGY
IF19.1
err2025-02-19
err0
PREAI
errWillem, Theresa; Shitov, Vladimir A.; Luecken, Malte D.; Kilbertus, Niki; Bauer, Stefan; Piraud, Marie; Buyx, Alena
errShare
errSave
Considerations for building and using integrated single-cell atlases
errNATURE METHODS
IF32.1
err2024-12-13
err0
PREAI
errHrovatin, Karin; Sikkema, Lisa; Shitov, Vladimir A.; Heimberg, Graham; Shulman, Maiia; Oliver, Amanda J.; Mueller, Michaela F.; Ibarra, Ignacio L.; Wang, Hanchen; Ramirez-Suastegui, Ciro; He, Peng; Schaar, Anna C.; Teichmann, Sarah A.; Theis, Fabian J.; Luecken, Malte D.
errShare
errSave
Heterogeneity-driven phenotypic plasticity and treatment response in branched-organoid models of pancreatic ductal adenocarcinoma
errNATURE BIOMEDICAL ENGINEERING
IF26.6
err2024-12-10
err0
errOAAI
errPapargyriou, Aristeidis; Najajreh, Mulham; Cook, David P.; Maurer, Carlo H.; Baerthel, Stefanie; Messal, Hendrik A.; Ravichandran, Sakthi K.; Richter, Till; Knolle, Moritz; Metzler, Thomas; Shastri, Akul R.; Oellinger, Rupert; Jasper, Jacob; Schmidleitner, Laura; Wang, Surui; Schneeweis, Christian; Ishikawa-Ankerhold, Hellen; Engleitner, Thomas; Mataite, Laura; Semina, Mariia; Trabulssi, Hussein; Lange, Sebastian; Ravichandra, Aashreya; Schuster, Maximilian; Mueller, Sebastian; Peschke, Katja; Schaefer, Arlett; Dobiasch, Sophie; Combs, Stephanie E.; Schmid, Roland M.; Bausch, Andreas R.; Braren, Rickmer; Heid, Irina; Scheel, Christina H.; Schneider, Guenter; Zeigerer, Anja; Luecken, Malte D.; Steiger, Katja; Kaissis, Georgios; van Rheenen, Jacco; Theis, Fabian J.; Saur, Dieter; Rad, Roland; Reichert, Maximilian
errShare
errSave
Probe set selection for targeted spatial transcriptomics
errNATURE METHODS
IF32.1
err2024-11-18
err1
errOAAI
errKuemmerle, Louis B.; Luecken, Malte D.; Firsova, Alexandra B.; Andrade e Sousa, Lisa Barros de; Strasser, Lena; Mekki, Ilhem Isra; Campi, Francesco; Heumos, Lukas; Shulman, Maiia; Beliaeva, Valentina; Hediyeh-Zadeh, Soroor; Schaar, Anna C.; Mahbubani, Krishnaa T.; Sountoulidis, Alexandros; Balassa, Tamas; Kovacs, Ferenc; Horvath, Peter; Piraud, Marie; Erturk, Ali; Samakovlis, Christos; Theis, Fabian J.
errShare
errSave
LSC-2024-Deciphering the spatial heterogeneity of interstitial lung disease by integrative radiomics and single-nucleus transcriptomics
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-10-30
err0
PREAI
errAmmeter, Michael; Chen, Yuexin; Mueller, Michaela; Zhou, Shuhong; De Sadeleer, Laurens J.; Brunner, Matthias; Distler, Oliver; Gabrys, Hubert S.; Tanadini-Lang, Stephanie; Luecken, Malte D.; Verleden, Stijn; Maurer, Britta; Schiller, Herbert B.; Gote-Schniering, Janine
errShare
errSave
Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multilineage cell circuit dynamics in human lung fibrogenesis
errSCIENCE TRANSLATIONAL MEDICINE
IF14.6
err2023-12-06
err19
errOAAI
errLang, Niklas J.; Gote-Schniering, Janine; Porras-Gonzalez, Diana; Yang, Lin; De Sadeleer, Laurens J.; Jentzsch, R. Christoph; Shitov, Vladimir A.; Zhou, Shuhong; Ansari, Meshal; Agami, Ahmed; Mayr, Christoph H.; Hooshiar Kashani, Baharak; Chen, Yuexin; Heumos, Lukas; Pestoni, Jeanine C.; Molnar, Eszter Sarolta; Geeraerts, Emiel; Anquetil, Vincent; Saniere, Laurent; Woegrath, Melanie; Gerckens, Michael; Lehmann, Mareike; Yildirim, Ali Onder; Hatz, Rudolf; Kneidinger, Nikolaus; Behr, Juergen; Wuyts, Wim A.; Stoleriu, Mircea-Gabriel; Luecken, Malte D.; Theis, Fabian J.; Burgstaller, Gerald; Schiller, Herbert B.
errShare
errSave
Early life adversity shapes social subordination and cell type-specific transcriptomic patterning in the ventral hippocampus
errSCIENCE ADVANCES
IF12.5
err2023-12-01
err10
errOAAI
errKos, Aron; Lopez, Juan Pablo; Bordes, Joeri; de Donno, Carlo; Dine, Julien; Brivio, Elena; Karamihalev, Stoyo; Luecken, Malte D.; Almeida-Correa, Suellen; Gasperoni, Serena; Dick, Alec; Miranda, Lucas; Buettner, Maren; Stoffel, Rainer; Flachskamm, Cornelia; Theis, Fabian J.; Schmidt, Mathias V.; Chen, Alon
errShare
errSave
Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multi-lineage cell circuit dynamics in human lung fibrogenesis
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2023-10-27
err1
errOAAI
errLang, Niklas Jonathan; Gote-Schniering, Janine; Porras-Gonzalez, Diana; Yang, Lin; De Sadeleer, Laurens J.; Jentzsch, R. Christoph; Shitov, Vladimir A.; Zhou, Shuhong; Ansari, Meshal; Agami, Ahmed; Mayr, Christoph H.; Kashani, Baharak Hooshiar; Chen, Yuexin; Heumos, Lukas; Pestoni, Jeanine C.; Geeraerts, Emil; Anquetil, Vincent; Saniere, Laurent; Woegrath, Melanie; Gerckens, Michael; Hatz, Rudolf; Kneidinger, Nikolaus; Behr, Juergen; Wuyts, Wim A.; Stoleriu, Mircea-Gabriel; Luecken, Malte D.; Theis, Fabian J.; Burgstaller, Gerald; Schiller, Herbert. B.
errShare
errSave
A Roadmap for a Consensus Human Skin Cell Atlas and Single-Cell Data Standardization
errJOURNAL OF INVESTIGATIVE DERMATOLOGY
IF5.7
err2023-09-01
err10
errOAAI
errAlmet, Axel A.; Yuan, Hao; Annusver, Karl; Ramos, Raul; Liu, Yingzi; Wiedemann, Julie; Sorkin, Dara H.; Landen, Ning Xu; Sonkoly, Eniko; Haniffa, Muzlifah; Nie, Qing; Lichtenberger, Beate M.; Luecken, Malte D.; Andersen, Bogi; Tsoi, Lam C.; Watt, Fiona M.; Gudjonsson, Johann E.; Plikus, Maksim, V; Kasper, Maria
errShare
errSave
An integrated cell atlas of the lung in health and disease
errNATURE MEDICINE
IF50
err2023-06-08
err163
errOAAI
errSikkema, Lisa; Ramirez-Suastegui, Ciro; Strobl, Daniel C.; Gillett, Tessa E.; Zappia, Luke; Madissoon, Elo; Markov, Nikolay S.; Zaragosi, Laure-Emmanuelle; Ji, Yuge; Ansari, Meshal; Arguel, Marie-Jeanne; Apperloo, Leonie; Banchero, Martin; Becavin, Christophe; Berg, Marijn; Chichelnitskiy, Evgeny; Chung, Mei-i; Collin, Antoine; Gay, Aurore C. A.; Gote-Schniering, Janine; Kashani, Baharak Hooshiar; Inecik, Kemal; Jain, Manu; Kapellos, Theodore S.; Kole, Tessa M.; Leroy, Sylvie; Mayr, Christoph H.; Oliver, Amanda J.; von Papen, Michael; Peter, Lance; Taylor, Chase J.; Walzthoeni, Thomas; Xu, Chuan; Bui, Linh T.; De Donno, Carlo; Dony, Leander; Faiz, Alen; Guo, Minzhe; Gutierrez, Austin J.; Heumos, Lukas; Huang, Ni; Ibarra, Ignacio L.; Jackson, Nathan D.; Murthy, Preetish Kadur Lakshminarasimha; Lotfollahi, Mohammad; Tabib, Tracy; Talavera-Lopez, Carlos; Travaglini, Kyle J.; Wilbrey-Clark, Anna; Worlock, Kaylee B.; Yoshida, Masahiro; van den Berge, Maarten; Bosse, Yohan; Desai, Tushar J.; Eickelberg, Oliver; Kaminski, Naftali; Krasnow, Mark A.; Lafyatis, Robert; Nikolic, Marko Z.; Powell, Joseph E.; Rajagopal, Jayaraj; Rojas, Mauricio; Rozenblatt-Rosen, Orit; Seibold, Max A.; Sheppard, Dean; Shepherd, Douglas P.; Sin, Don D.; Timens, Wim; Tsankov, Alexander M.; Whitsett, Jeffrey; Xu, Yan; Banovich, Nicholas E.; Barbry, Pascal; Duong, Thu Elizabeth; Falk, Christine S.; Meyer, Kerstin B.; Kropski, Jonathan A.; Pe'er, Dana; Schiller, Herbert B.; Tata, Purushothama Rao; Schultze, Joachim L.; Teichmann, Sara A.; Misharin, Alexander, V; Nawijn, Martijn C.; Luecken, Malte D.; Theis, Fabian J.; Chen, Yuexin; Hagood, James S.; Agami, Ahmed; Horvath, Peter; Lundeberg, Joakim; Marquette, Charles-Hugo; Pryhuber, Gloria; Samakovlis, Chistos; Sun, Xin; Ware, Lorraine B.; Zhang, Kun
errShare
errSave
Synthetic enforcement of STING signaling in cancer cells appropriates the immune microenvironment for checkpoint inhibitor therapy
errSCIENCE ADVANCES
IF12.5
err2023-03-17
err24
errOAAI
errVornholz, Larsen; Isay, Sophie E.; Kurgyis, Zsuzsanna; Strobl, Daniel C.; Loll, Patricia; Mosa, Mohammed H.; Luecken, Malte D.; Sterr, Michael; Lickert, Heiko; Winter, Christof; Greten, Florian R.; Farin, Henner F.; Theis, Fabian J.; Ruland, Juergen
errShare
errSave
Primary cilia and SHH signaling impairments in human and mouse models of Parkinson's disease
errNATURE COMMUNICATIONS
IF15.7
err2022-08-16
err28
errOAAI
errSchmidt, Sebastian; Luecken, Malte D.; Truembach, Dietrich; Hembach, Sina; Niedermeier, Kristina M.; Wenck, Nicole; Pfluegler, Klaus; Stautner, Constantin; Boettcher, Anika; Lickert, Heiko; Ramirez-Suastegui, Ciro; Ahmad, Ruhel; Ziller, Michael J.; Fitzgerald, Julia C.; Ruf, Viktoria; van de Berg, Wilma D. J.; Jonker, Allert J.; Gasser, Thomas; Winner, Beate; Winkler, Juergen; Weisenhorn, Daniela M. Vogt; Giesert, Florian; Theis, Fabian J.; Wurst, Wolfgang
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
J
Joshua R. Sanes
H-index: 146 · Papers: 446
S
Sarah A. Teichmann
H-index: 141 · Papers: 677
T
Thomas Gasser
H-index: 137 · Papers: 1.4K
J
Jeffrey A. Whitsett
H-index: 136 · Papers: 759
F
FamilariMary (Fiona M. Watt)
H-index: 127 · Papers: 682
View more