Not logged in Claudin 18.2 as a Biomarker for Imaging and Radiopharmaceutical Therapy in Gastric and Pancreatic Tumors Raheem, Shvan J.; Bashyal, Santosh; Haj-Mirzaian, Arvin; Monfared, Yousef Khazaei; Mahmood, Umar; Heidari, Pedram; Strickland, Matthew R.; Ting, David T.; Klempner, Samuel J.; Larimer, Benjamin M.; Esfahani, Shadi A. Share Save
A TROP2/Claudin program mediates immune exclusion to impede checkpoint blockade in breast cancer Wu, Bogang; Thant, Win; Bitman, Elena; Liu, Ting; Liu, Jie; Ilios, Eleftherios Paschalis; Xu, Katherine; Nieman, Linda; Ting, David; Thimmiah, Nayana; Sun, Sheng; Abelman, Rachel; Isakoff, Steven; Spring, Laura; Bardia, Aditya; Ellisen, Leif Share Save
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Assessment of Lorlatinib Resistance in ALKPositive Non-Small Cell Lung Cancer Patient Samples Using Spatial Transcriptomics Patel, Bidish; Richieri, Peter; Lu, Chenyue; Raabe, Michael; Mino-Kenudson, Mari; Aryee, Martin; Gainor, Justin; Hata, Aaron; Ting, David; Lin, Jessica Share Save
Cancer cells restrict immunogenicity of retrotransposon expression via distinct mechanisms Sun, Siyu; You, Eunae; Hong, Jungeui; Hoyos, David; Del Priore, Isabella; Tsanov, Kaloyan M.; Mattagajasingh, Om; Di Gioacchino, Andrea; Marhon, Sajid A.; Chacon-Barahona, Jonathan; Li, Hao; Jiang, Hua; Hozeifi, Samira; Rosas-Bringas, Omar; Xu, Katherine H.; Song, Yuhui; Lang, Evan R.; Rojas, Alexandra S.; Nieman, Linda T.; Patel, Bidish K.; Murali, Rajmohan; Chanda, Pharto; Karacay, Ali; Vabret, Nicolas; De Carvalho, Daniel D.; Zenklusen, Daniel; Lacava, John; Lowe, Scott W.; Ting, David T.; lacobuzio-Donahue, Christine A.; Solovyov, Alexander; Greenbaum, Benjamin D. Share Save
HCC spatial transcriptomic profiling reveals significant and potentially targetable cancer-endothelial interactions Lu, Chenyue; Pankaj, Amaya; Raabe, Michael; Nawrocki, Cole; Liu, Ann; Xu, Nova; Patel, Bidish K.; Emmett, Matthew J.; Coley, Avril K.; Ferrone, Cristina R.; Deshpande, Vikram; Bhan, Irun; Hoshida, Yujin; Ting, David T.; Aryee, Martin J.; Franses, Joseph W. Share Save
LINE-1 ORF1p mimics viral innate immune evasion mechanisms in pancreatic cancer You, Eunae; Patel, Bidish; Rojas, Alexandra; Sun, Siyu; Ho, Natalie; Phillips, Ildiko; Raabe, Michael; Song, Yuhui; Xu, Katherine; Kocher, Joshua; Richieri, Peter; Taylor, Martin; Nieman, Linda; Greenbaum, Benjamin; Ting, David Share Save
Repeat RNA mediated disruption of cellular plasticity in pancreatic cancer You, Eunae; Danaher, Patrick; Lu, Chenyue; Sun, Siyu; Zou, Luli; Phillips, Ildiko; Rojas, Alexandra; Ho, Natalie; Song, Yuhui; Raabe, Michael; Xu, Katherine; Richieri, Peter; Li, Hao; Aston, Natalie; Porter, Rebecca; Patel, Bidish; Nieman, Linda; Schurman, Nathan; Hudson, Briana; North, Khrystyna; Church, Sarah; Deshpande, Vikram; Liss, Andrew; Kim, Tae; Cui, Yi; Kim, Youngmi; Greenbaum, Benjamin; Aryee, Martin; Ting, David Share Save
Spatial Transcriptomics Unveils Intraductal Papillary Mucinous Neoplasm Heterogeneity: From Novel Clusters to Immune Dynamics Pankaj, Amaya; Raabe, Michael J.; Song, Yuhui; Patel, Bidish K.; Xu, Katherine; Kocher, Joshua R.; Caldwell, Nicholas J.; Ganci, Maria L.; Nieman, Linda T.; Mino-Kenudson, Mari; Deshpande, Vikram; Bardeesy, Nabeel; Fernandez-Del Castillo, Carlos; Aryee, Martin J.; Ting, David T.; Hernandez-Barco, Yasmin G. Share Save
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Spatially resolved analysis of pancreatic cancer identifies therapy-associated remodeling of the tumor microenvironment Shiau, Carina; Cao, Jingyi; Gong, Dennis; Gregory, Mark T.; Caldwell, Nicholas J.; Yin, Xunqin; Cho, Jae-Won; Wang, Peter L.; Su, Jennifer; Wang, Steven; Reeves, Jason W.; Kim, Tae Kyung; Kim, Youngmi; Guo, Jimmy A.; Lester, Nicole A.; Bae, Jung Woo; Zhao, Ryan; Schurman, Nathan; Barth, Jamie L.; Ganci, Maria L.; Weissleder, Ralph; Jacks, Tyler; Qadan, Motaz; Hong, Theodore S.; Wo, Jennifer Y.; Roberts, Hannah; Beechem, Joseph M.; Fernandez-del Castillo, Carlos; Mino-Kenudson, Mari; Ting, David T.; Hemberg, Martin; Hwang, William L. Share Save
Transfer Learning Reveals Cancer-Associated Fibroblasts Are Associated with Epithelial-Mesenchymal Transition and Inflammation in Cancer Cells in Pancreatic Ductal Adenocarcinoma Guinn, Samantha; Kinny-Koster, Benedict; Tandurella, Joseph A.; Mitchell, Jacob T.; Sidiropoulos, Dimitrios N.; Loth, Melanie; Lyman, Melissa R.; Pucsek, Alexandra B.; Zabransky, Daniel J.; Lee, Jae W.; Kartalia, Emma; Ramani, Mili; Seppala, Toni T.; Cherry, Christopher; Suri, Reecha; Zlomke, Haley; Patel, Jignasha; He, Jin; Wolfgang, Christopher L.; Yu, Jun; Zheng, Lei; Ryan, David P.; Ting, David T.; Kimmelman, Alec; Gupta, Anuj; Danilova, Ludmila; Elisseeff, Jennifer H.; Wood, Laura D.; Stein-O'Brien, Genevieve; Kagohara, Luciane T.; Jaffee, Elizabeth M.; Burkhart, Richard A.; Fertig, Elana J.; Zimmerman, Jacquelyn W. Share Save
Dissecting and quantifying pancreatic cancer plasticity using single-cell multiomics, lineage tracing and functional genomics reveals novel mediators of therapy resistance Mehta, Arnav; Bi, Lynn; Yeramosu, Deepika; Bogaev, Michael; Jankowiak, Martin; Collins, Abigail; Al'Khafaji, Aziz; Parikh, Milan; Babadi, Mehrtash; Evans, Kyle; Bloemendal, Alex; Kunnes, Russell; Schwartz, Marc; Munson, Glen; Donnard, Elisa; Jones, Thouis R.; Stanger, Ben Z.; Shendure, Jay; Weissman, Jonathan; Ting, David T.; Aguirre, Andrew; Hacohen, Nir; Pe'er, Dana; Lander, Eric S. Share Save
Interplay between B7-H3 and HLA class I in the clinical course of pancreatic ductal adenocarcinoma Cattaneo, Giulia; Ventin, Marco; Arya, Shahrzad; Kontos, Filippos; Michelakos, Theodoros; Sekigami, Yurie; Cai, Lei; Villani, Vincenzo; Sabbatino, Francesco; Chen, Francine; Sadagopan, Ananthan; Deshpande, Vikram; Moore, Paul A.; Ting, David T.; Bardeesy, Nabeel; Wang, Xinhui; Ferrone, Soldano; Ferrone, Cristina R. Share Save
Understanding spatial organization of cellular plasticity in pancreatic ductal adenocarcinoma Zamora, Izabella; Parikh, Milan; Patel, Bidish K.; Bi, Lynn; Haviv, Doron; Cao, Jingyi; Shiau, Carina; Hemberg, Martin; Hwang, William L.; Hacohen, Nir; Ting, David T.; Mehta, Arnav Share Save
The transcriptional and epigenetic regulation of epithelial-mesenchymal plasticity in patient-derived pancreatic cancer cell lines Yeramosu, Deepika; Bi, Lynn; Collins, Abigail; Bogaev, Mike; Jankowiak, Martin; Al'Khafaji, Aziz; Parikh, Milan; Babadi, Mehrtash; Bloemendal, Alex; Nagaraja, Surya; Jones, Ray; Shendure, Jay; Ting, David T.; Aguirre, Andrew; Hacohen, Nir; Pe'er, Dana; Lander, Eric S.; Mehta, Arnav Share Save
Dissecting pancreatic cancer tumor- immune microenvironment crosstalk using spatial transcriptomics Pankaj, Amaya; Raabe, Michael J.; Patel, Bidish K.; Lang, Evan R.; Kocher, Joshua R.; Xu, Katherine H.; Nieman, Linda T.; Hwang, William L.; Kimmelman, Alec C.; Ryan, David P.; Hong, Theodore S.; Aryee, Martin J.; Ting, David T. Share Save
Enhancing CAR T cell-based immunotherapy outcomes in PDAC: Evaluating iC9.B7-H3 CAR T cells in adjuvant, neoadjuvant, and monotherapy settings Arya, Shahrzad; Sanatkar, Seyed Amir; Ventin, Marco; Cattaneo, Giulia; Martin, Cristina; Lionetto, Gabriella; Jia, Jingyu; Chen, Feng; Ting, David T.; Wang, Xinhui; Ryeom, Sandra; Ferrone, Cristina R.; Ferrone, Soldano Share Save
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