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K

Krishna R. Kalari

mayo clinic department of quantitative health sciences, , 55905 minnesota,

47H-index
426Paper Count
9.5KCitation Count
Published Papers 120
Publication Date
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Elucidating Molecular Mechanisms Governing TNF-Alpha-Mediated Regulation of Amyloid Beta 42 Uptake in Blood-Brain Barrier Endothelial Cells
errMolecular Pharmacology
IF3
err2025-11-12
err0
PREAI
errVrishali S. Salian; Geoffry L. Curan; Val J. Lowe; Xiaojia Tang; Krishna R. Kalari; Karunya K. Kandimalla
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An interpretable and adaptive autoencoder for efficient tissue deconvolution
errNucleic Acids Research
IF13.1
err2025-09-01
err0
errOAAI
errJesús de la Fuente; Naroa Legarra-Marcos; Aintzane Diaz-Mazkiaran; Guillermo Serrano; Irene Marín-Goñi; Markel Benito Sendin; Ana García Osta; Krishna R Kalari; Carlos Fernandez-Granda; Idoia Ochoa; Mikel Hernaez
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Novel set of plasma proteins classifies Alzheimer's dementia in African American individuals with high accuracy
errAlzheimer's & Dementia
IF11.1
err2025-07-28
err0
errOAAI
errLindsey A. Kuchenbecker; Kevin J. Thompson; Cheyenne D. Hurst; Yen-Ning Huang; Michael G. Heckman; Joseph S. Reddy; Thuy Nguyen; Heidi L. Casellas; Katie D. Sotelo; Delila J. Reddy; Bianca M. Opdenbosch; Wei Tsai; Andrew J. Saykin; John A. Lucas; Floyd B. Willis; Gregory S. Day; Vijay K. Ramanan; Neill R. Graff-Radford; Nilufer Ertekin-Taner; Kwangsik Nho; Krishna R. Kalari; Minerva M. Carrasquillo
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Lessons learned from a candidate gene study investigating aromatase inhibitor treatment outcome in breast cancer
errNPJ BREAST CANCER
IF7.6
err2025-02-19
err0
errOAAI
errHoppe, Reiner; Winter, Stefan; Lo, Wing-Yee; Michailidou, Kyriaki; Bolla, Manjeet K.; Keeman, Renske; Wang, Qin; Dennis, Joe; Lush, Michael; Kalari, Krishna R.; Goetz, Matthew P.; Wang, Liewei; Cairns, Junmei; Weinshilboum, Richard; Shepherd, Lois; Chen, Bingshu E.; Haeberle, Lothar; Ruebner, Matthias; Beckmann, Matthias W.; He, Wei; Larson, Nicole L.; Armasu, Sebastian M.; Schroth, Werner; Chowbay, Balram; Khor, Chiea Chuen; Abubakar, Mustapha; Antoniou, Antonis C.; Bruening, Thomas; Castelao, Jose E.; Chang-Claude, Jenny; Doerk, Thilo; Eccles, Diana M.; Figueroa, Jonine D.; Gago-Dominguez, Manuela; Garcia-Saenz, Jose A.; Guendert, Melanie; Hack, Carolin C.; Hamann, Ute; Han, Sileny; Hooning, Maartje J.; Huebner, Hanna; John, Esther M.; Ko, Yon-Dschun; Kristensen, Vessela N.; Linn, Sabine; Margolin, Sara; Mavroudis, Dimitrios; Nevanlinna, Heli; Neven, Patrick; Obi, Nadia; Park-Simon, Tjoung-Won; Pylkaes, Katri; Rashid, Muhammad U.; Romero, Atocha; Saloustros, Emmanouil; Sawyer, Elinor J.; Tapper, William J.; Tomlinson, Ian; Wendt, Camilla; Winqvist, Robert; Dunning, Alison M.; Simard, Jacques; Hall, Per; Pharoah, Paul D. P.; Schwab, Matthias; Couch, Fergus J.; Czene, Kamila; Fasching, Peter A.; Easton, Douglas F.; Schmidt, Marjanka K.; Ingle, James N.; Brauch, Hiltrud
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Validation of histopathology foundation models through whole slide image retrieval
errSCIENTIFIC REPORTS
IF3.9
err2025-02-01
err0
errOAAI
errAlfasly, Saghir; Alabtah, Ghazal; Hemati, Sobhan; Kalari, Krishna Rani; Garcia, Joaquin J.; Tizhoosh, H. R.
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errSave
QSP Modeling Shows Pathological Synergism Between Insulin Resistance and Amyloid-Beta Exposure in Upregulating VCAM1 Expression at the BBB Endothelium
errCPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY
IF3
err2024-12-27
err0
PREAI
errWang, Zengtao; Veerareddy, Vaishnavi; Tang, Xiaojiao; Thompson, Kevin J.; Krishnan, Sunil; Kalari, Krishna R.; Kandimalla, Karunya K.
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errSave
Molecular Mechanisms Underlying Amyloid Beta Peptide Mediated Upregulation of Vascular Cell Adhesion Molecule-1 in Alzheimer Disease
errJOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS
IF3.8
err2024-12-01
err1
errOAAI
errSalian, Vrishali S.; Tang, Xiaojia; Thompson, Kevin J.; Curan, Geoffry L.; Lowe, Val J.; Li, Ling; Kalari, Krishna R.; Kandimalla, Karunya K.
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errSave
OmicsFootPrint: a framework to integrate and interpret multi-omics data using circular images and deep neural networks
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-10-24
err0
errOAAI
errTang, Xiaojia; Prodduturi, Naresh; Thompson, Kevin J.; Weinshilboum, Richard; O'Sullivan, Ciara C.; Boughey, Judy C.; Tizhoosh, Hamid R.; Klee, Eric W.; Wang, Liewei; Goetz, Matthew P.; Suman, Vera; Kalari, Krishna R.
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errSave
Pre-treatment peripheral blood immunophenotyping and response to neoadjuvant chemotherapy in operable breast cancer
errBREAST CANCER RESEARCH
IF5.6
err2024-06-10
err0
errOAAI
errLeon-Ferre, Roberto A.; Whitaker, Kaitlyn R.; Suman, Vera J.; Hoskin, Tanya; Giridhar, Karthik V.; Moore, Raymond M.; Al-Jarrad, Ahmad; McLaughlin, Sarah A.; Northfelt, Donald W.; Hunt, Katie N.; Conners, Amy Lynn; Moyer, Ann; Carter, Jodi M.; Kalari, Krishna; Weinshilboum, Richard; Wang, Liewei; Ingle, James N.; Knutson, Keith L.; Ansell, Stephen M.; Boughey, Judy C.; Goetz, Matthew P.; Villasboas, Jose C.
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ReCorDE: a framework for identifying drug classes targeting shared vulnerabilities with applications to synergistic drug discovery
errFRONTIERS IN ONCOLOGY
IF3.3
err2024-05-31
err0
errOAAI
errJohn, August J.; Ghose, Emily T.; Gao, Huanyao; Luck, Meagan; Jeong, Dabin; Kalari, Krishna R.; Wang, Liewei
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errSave
Pericyte Control of Gene Expression in the Blood-Brain Barrier Endothelium: Implications for Alzheimer's Disease
errJOURNAL OF ALZHEIMERS DISEASE
IF3.1
err2024-05-07
err0
PREAI
errNelson, Doug; Thompson, Kevin J.; Wang, Lushan; Wang, Zengtao; Eberts, Paulina; Azarin, Samira M.; Kalari, Krishna R.; Kandimalla, Karunya K.
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The spatially resolved single-cell atlas of the tumor immune architecture revealed the central role of IFN-alpha and plasmacytoid dendritic cells in triple-negative breast cancer in the Mayo Clinic cohort and FinXX trial
errCANCER RESEARCH
IF16.6
err2024-05-02
err0
PREAI
errChumsri, Saranya; Liu, Yi; Ma, Yaohua; Carter, Jodi; Gregory, Mark; Church, Sarah; Reeves, Jason; Brauer, Heather Ann; Warren, Sarah; Joensuu, Heikki; Perez, Edith; Leon-Ferre, Roberto; Hillman, David; Boughey, Judy; Ingle, James; Kalari, Krishna; Couch, Fergus; Goetz, Matthew; Knutson, Keith; Thompson, E.
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Automated mitotic spindle hotspot counts are highly associated with clinical outcomes in systemically untreated early-stage triple-negative breast cancer
errNPJ BREAST CANCER
IF7.6
err2024-03-29
err0
errOAAI
errLeon-Ferre, Roberto A.; Carter, Jodi M.; Zahrieh, David; Sinnwell, Jason P.; Salgado, Roberto; Suman, Vera J.; Hillman, David W.; Boughey, Judy C.; Kalari, Krishna R.; Couch, Fergus J.; Ingle, James N.; Balkenhol, Maschenka; Ciompi, Francesco; van der Laak, Jeroen; Goetz, Matthew P.
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Tumor- immune microenvironment associated with obesity in triplenegative breast cancer in the Mayo Clinic cohort
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errPang, Songhan; Liu, Yi; Ma, Yaohua; Li, Zhuo; Leon-Ferre, Roberto A.; Zahrieh, David; Hillman, David W.; Boughey, Judy C.; Ingle, James N.; Kalari, Krishna R.; Couch, Fergus J.; Goetz, Matthew P.; Knutson, Keith L.; Chumsri, Saranya; Thompson, E. Aubrey
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Exploiting JAK/STAT signaling to inhibit highly advanced and resistant forms of ovarian cancer
errCANCER RESEARCH
IF16.6
err2024-03-04
err0
PREAI
errRodman, Esther; Emch, Michael; Bajaj, Archit; Tang, Xiaojia; Hou, Xiaonan; Kaufmann, Scott; Kalari, Krishna; Weroha, John; Hawse, John
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Identification of a Notch transcriptomic signature for breast cancer
errBREAST CANCER RESEARCH
IF5.6
err2024-01-03
err4
errOAAI
errBraune, Eike-Benjamin; Geist, Felix; Tang, Xiaojia; Kalari, Krishna; Boughey, Judy; Wang, Liewei; Leon-Ferre, Roberto A.; D'Assoro, Antonino B.; Ingle, James N.; Goetz, Matthew P.; Kreis, Julian; Wang, Kang; Foukakis, Theodoros; Seshire, Anita; Wienke, Dirk; Lendahl, Urban
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Endoxifen downregulates AKT phosphorylation through protein kinase C beta 1 inhibition in ERα+ breast cancer
errNPJ BREAST CANCER
IF7.6
err2023-12-19
err3
errOAAI
errJayaraman, Swaathi; Wu, Xinyan; Kalari, Krishna R.; Tang, Xiaojia; Kuffel, Mary J.; Bruinsma, Elizabeth S.; Jalali, Shahrzad; Peterson, Kevin L.; Correia, Cristina; Kudgus, Rachel A.; Kaufmann, Scott H.; Renuse, Santosh; Ingle, James N.; Reid, Joel M.; Ames, Matthew M.; Fields, Alan P.; Schellenberg, Matthew J.; Hawse, John R.; Pandey, Akhilesh; Goetz, Matthew P.
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errSave
Identification of a Notch transcriptomic signature for breast cancer
errMOLECULAR CANCER THERAPEUTICS
IF5.5
err2023-12-01
err0
PREAI
errBraune, Eike-Benjamin; Geist, Felix; Tang, Xiaojia; Kalari, Krishna; Boughey, Judy; Wang, Liewei; Leon-Ferre, Roberto A.; D'Assoro, Antonino B.; Ingle, James N.; Goetz, Matthew P.; Wang, Kang; Foukakis, Theodoros; Seshire, Anita; Wienke, Dirk; Lendahl, Urban
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Estrogen-regulated miRs in bone enhance osteoblast differentiation and matrix mineralization
errMOLECULAR THERAPY-NUCLEIC ACIDS
IF0
err2023-09-01
err4
errOAAI
errEmch, Michael J.; Wicik, Zofia; Aspros, Kirsten G. M.; Vukajlovic, Tanja; Pitel, Kevin S.; Narum, Anders K.; Weivoda, Megan M.; Tang, Xiaojia; Kalari, Krishna R.; Turner, Russell T.; Iwaniec, Urszula T.; Monroe, David G.; Subramaniam, Malayannan; Hawse, John R.
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Integration of multiomics data shows down regulation of mismatch repair and tubulin pathways in triple-negative chemotherapy-resistant breast tumors
errBREAST CANCER RESEARCH
IF5.6
err2023-05-24
err1
errOAAI
errTang, Xiaojia; Thompson, Kevin J.; Kalari, Krishna R.; Sinnwell, Jason P.; Suman, Vera J.; Vedell, Peter T.; McLaughlin, Sarah A.; Northfelt, Donald W.; Aspitia, Alvaro Moreno; Gray, Richard J.; Carter, Jodi M.; Weinshilboum, Richard; Wang, Liewei; Boughey, Judy C.; Goetz, Matthew P.
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Charles M. Perou
H-index: 193 · Papers: 2.0K
M
Manel Esteller
H-index: 165 · Papers: 1.6K
D
Donna M. Muzny
H-index: 156 · Papers: 693
A
Andrew J. Saykin
H-index: 154 · Papers: 1.9K
M
Michiaki Kubo
H-index: 138 · Papers: 1.1K
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