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B

Beth Shapiro

University of California, Santa Cruz

93H-index
405Paper Count
3.2WCitation Count
Published Papers 134
Publication Date
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Paleogenomic insight into the collapse; recovery; and management of American bison
errScience
IF45.8
err2026-08-06
err0
PREAI
errJonas Oppenheimer; Joshua D. Kapp; Molly Cassatt-Johnstone; Samuel Sacco; William E. Seligmann; Holland C. Conwell; Sarah Ford; Cassandra Gunn; Lael D. Barlow; Amy Phillips; Kenneth P. Cannon; Lawrence C. Todd; Spencer R. Pelton; Glen MacKay; Kyle Forsythe; Mark A. Edwards; Mark C. Ball; David R. W. Bruinsma; Jessica Z. Metcalfe; John W. Ives; Robert J. Losey; Tatiana Nomokonova; Tomasin Playford; Chris Widga; Craig M. Lee; Karsten Heuer; Wes Olson; Paul Stothard; John Southon; Donalee M. Deck; Christopher N. Jass; Richard E. Green; Lee C. Jones; Gregg P. Adams; Todd K. Shury; Gregory A. Wilson; Beth Shapiro
errShare
errSave
Adopted mammoths from Alaska turn out to be a whale's tale
errJOURNAL OF QUATERNARY SCIENCE
IF2.2
err2025-12-01
err0
PREAI
errWooller, Matthew J.; Drukenmiller, Pat; Oteo-Garcia, Gonzalo; Di Paolo, Francesca; Dalen, Love; Baker, Nick; Bigelow, Nancy; Fields, Stormy; Ghosh, Sambit; Krasinski, Kathryn E.; Lamm, Ben; Monteath, Alistair J.; Potter, Ben A.; Rasic, Jeff; Reuther, Josh; Rowe, Audrey; Shapiro, Beth; Southon, John; Wygal, Brian T.
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errSave
Author Correction: Striking convergent selection history of wheat and barley and its potential for breeding
errNature Plants
IF13.6
err2025-11-24
err0
errOAAI
errMamadou Dia Sow; Cristian Forestan; Caroline Pont; Peter Civan; Raffaella Battaglia; Michael Seidel; Clea Siguret; Pasquale Luca Curci; Alessandro Tondelli; Daniela Bustos Korts; Elisabetta Mazzucotelli; Thibault Leroy; Cécile Huneau; Manon Delahaye; Danara Ormanbekova; Matteo Bozzoli; Perle Guarino-Vignon; Caroline Schaal; Manon Cabanis; Marie Lelievre; Jean Cayrol; Davide Guerra; Domenica Nigro; Agata Gadaleta; Jennifer Ens; Krystalee Wiebe; Beth Shapiro; Richard E. Green; Fred van Eeuwijk; Micha Bayer; Joanne Russell; Ian Dawson; Robbie Waugh; Benjamin Kilian; Ludovic Orlando; Gabriella Sonnante; Curtis J. Pozniak; Roberto Tuberosa; Georg Haberer; Marco Maccaferri; Luigi Cattivelli; Jerome Salse
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errSave
Striking convergent selection history of wheat and barley and its potential for breeding
errNature Plants
IF13.6
err2025-11-17
err0
errOAAI
errMamadou Dia Sow; Cristian Forestan; Caroline Pont; Peter Civan; Raffaella Battaglia; Michael Seidel; Clea Siguret; Pasquale Luca Curci; Alessandro Tondelli; Daniela Bustos Korts; Elisabetta Mazzucotelli; Thibault Leroy; Cécile Huneau; Manon Delayhe; Danara Ormanbekova; Matteo Bozzoli; Perle Guarino-Vignon; Caroline Schaal; Manon Cabanis; Marie Lelievre; Jean Cayrol; Davide Guerra; Domenica Nigro; Agata Gadaleta; Jennifer Ens; Krystalee Wiebe; Beth Shapiro; Richard E. Green; Fred van Eeuwijk; Micha Bayer; Joanne Russell; Ian Dawson; Robbie Waugh; Benjamin Kilian; Ludovic Orlando; Gabriella Sonnante; Curtis J. Pozniak; Roberto Tuberosa; Georg Haberer; Marco Maccaferri; Luigi Cattivelli; Jerome Salse
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errSave
Chromosome-scale Genomes Show Rapid Diversification and Ancient Gene Flow Among Bear Species
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2025-11-01
err1
errOAAI
errWooldridge, T. Brock; Escalona, Merly; Perry, Blair W.; Enstrom, Alexis N.; Salih, Dalya; Seligmann, William E.; Sacco, Samuel; Moon, Katherine L.; Sahasrabudhe, Ruta; Chumchim, Noravit; Nguyen, Oanh; Kelley, Joanna L.; MacPhee, Ross D. E.; Shapiro, Beth
errShare
errSave
Paleogenomics Reveals a Loss of Bovine Lineages in Mid-latitude Asia Over the Last 200,000 Years
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2025-11-01
err0
errOAAI
errGilardet, Alexandre; Oppenheimer, Jonas; Sinding, Mikkel-Holger S.; Lord, Edana; Chacon-Duque, J. Camilo; Oteo-Garcia, Gonzalo; Xenikoudakis, Georgios; Kosintsev, Pavel; Southon, John; Vasiliev, Sergey K.; Shunkov, Michael, V; Kozlikin, Maxim B.; Douka, Katerina; Shapiro, Beth; Heintzman, Peter D.; Dalen, Love
errShare
errSave
Ancient sedimentary DNA shows more than 5000 years of continuous beaver occupancy in Grand Teton National Park
errEcosphere
IF2.9
err2025-10-14
err0
errOAAI
errD. Nevé Baker; Darren J. Larsen; Emily Fairfax; Amelia P. Muscott; Beth Shapiro; Sarah E. Crump
errShare
errSave
De-extinction technology and its application to conservation
errJOURNAL OF HEREDITY
IF2.5
err2025-10-01
err0
errOAAI
errTurner, Stephen D.; Keyte, Anna; Pask, Andrew; Shapiro, Beth
errShare
errSave
Ancient host-associated microbes obtained from mammoth remains
errCell
IF42.5
err2025-09-02
err0
PREAI
errBenjamin Guinet; Nikolay Oskolkov; Kelsey Moreland; Marianne Dehasque; J. Camilo Chacón-Duque; Anders Angerbjörn; Juan Luis Arsuaga; Gleb Danilov; Foteini Kanellidou; Andrew C. Kitchener; Héloïse Muller; Valerii Plotnikov; Albert Protopopov; Alexei Tikhonov; Laura Termes; Grant Zazula; Peter Mortensen; Lena Grigorieva; Michael Richards; Beth Shapiro; Adrian M. Lister; Sergey Vartanyan; David Díez-del-Molino; Anders Götherström; Patrícia Pečnerová; Pavel Nikolskiy; Love Dalén; Tom van der Valk
errShare
errSave
Recent Adaptation in a Threatened Salmonid Revealed by Museum Genomics
errMolecular Ecology
IF3.9
err2025-09-02
err0
errOAAI
errAndrew G. Sharo; Megan A. Supple; Randy Cabrera; William E. Seligmann; Samuel Sacco; Cassondra D. Columbus; Devon E. Pearse; Beth Shapiro; John Carlos Garza
errShare
errSave
Persistent Genomic Erosion in Whooping Cranes Despite Demographic Recovery
errMolecular Ecology
IF3.9
err2025-08-26
err0
errOAAI
errClaudia Fontsere; Samuel A. Speak; Andrew J. Caven; Juan Antonio Rodríguez; Xuejing Wang; Carolina Pacheco; Molly Cassatt-Johnstone; Georgette Femerling; Brigid Maloney; Jennifer Balacco; Joanna Collins; Ying Sims; Linelle Abueg; Olivier Fedrigo; Erich D. Jarvis; Barry K. Hartup; Beth Shapiro; M. Thomas P. Gilbert; Cock van Oosterhout; Hernán E. Morales
errShare
errSave
Converging evidence constrains late pleistocene bering land bridge history
errQuaternary Science Advances
IF2.2
err2025-08-12
err0
errOAAI
errCiara Wanket; Samuel Kodama; Jonas Oppenheimer; Scott Cocker; Emma Steigerwald; Duane Froese; Beth Shapiro; Tamara Pico; Jesse Farmer
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errSave
The genomic history of Iberian horses since the last Ice Age
errNature Communications
IF15.7
err2025-08-02
err0
errOAAI
errJaime Lira Garrido; Gaétan Tressières; Lorelei Chauvey; Stéphanie Schiavinato; Laure Calvière-Tonasso; Andaine Seguin-Orlando; John Southon; Beth Shapiro; Clément Bataille; Julie Birgel; Stefanie Wagner; Naveed Khan; Xuexue Liu; José María Rodanés; Jesús V. Picazo Millán; Josep Giralt; Natàlia Alonso; Isidro Aguilera; Adriano Orsingher; Angela Trentacoste; Xavier Payà; Marta Morán; María Pilar Iborra Eres; Silvia Albizuri; Silvia Valenzuela Lamas; Imma Mestres Santandreu; Montserrat Duran Caixal; Jordi Principal; Jordi Farré Huguet; Xavier Esteve; Mireia Pedro Pasqual; Nohemi Sala; Adrián Pablos; Patricia Martín; Josep Maria Vergès; Rodrigo Portero; Pablo Arias; Roberto Ontañón Peredo; Cleia Detry; Cristina Luís; João Luís Cardoso; Aren M. Maeir; Maria J. Valente; Elena Grau; Vicent Estall i Poles; Joaquín Alfonso Llorens; Ana Miguélez González; Armelle Gardeisen; Michele Cupitò; Umberto Tecchiati; Daniel G. Bradley; Liora Kolska Horwitz; Esther Rodríguez González; Ariadna Nieto Espinet; Pere Bover; Rosa Ruiz Entrecanales; Ignasi Garcés Estallo; Joaquín Jiménez Fragoso; Sebastián Celestino; Ludovic Orlando
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errSave
Hi-reComb: constructing recombination maps from bulk gamete Hi-C sequencing
errGENETICS
IF5.1
err2025-08-01
err0
errOAAI
errMalinsky, Milan; Talbi, Marion; Zhou, Chenxi; Maurer, Nicholas; Sacco, Samuel; Shapiro, Beth; Peichel, Catherine L.; Seehausen, Ole; Salzburger, Walter; Weber, Jesse N.; Bolnick, Daniel, I; Green, Richard E.; Durbin, Richard
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errSave
A chromosome-level genome of the Nicobar pigeon, Caloenas nicobarica
errJOURNAL OF HEREDITY
IF2.5
err2025-06-01
err0
errOAAI
errAlexandre, Nicolas; Balacco, Jennifer; Tilley, Tatiana; Abueg, Linelle; Brajuka, Nadolina; Moreira, Lucas R.; Whelan, Conor; Taylor, Erika Schwarz; Jarvis, Erich D.; Fedrigo, Olivier; Shapiro, Beth; Keyte, Anna L.
errShare
errSave
Genomic data from the extinct California brown bear suggests a source population for reintroduction to California
errJOURNAL OF HEREDITY
IF2.5
err2025-04-24
err0
PREAI
errWooldridge, T. Brock; Wang, Ming-Shan; Saremi, Nedda F.; Kapp, Joshua D.; Moon, Katherine L.; Heintzman, Peter D.; Dumbacher, John P.; Alagona, Peter S.; Long, Barney; Shapiro, Beth
errShare
errSave
A chromosome-level genome assembly of the mountain lion, Puma concolor
errJOURNAL OF HEREDITY
IF2.5
err2024-11-07
err0
errOAAI
errSupple, Megan A.; Escalona, Merly; Alexandre, Nicolas; Buchalski, Michael R.; Riley, Seth P. D.; Dellinger, Justin A.; Vickers, T. Winston; Sahasrabudhe, Ruta; Nguyen, Oanh; Fairbairn, Colin W.; Seligmann, William E.; Wilmers, Christopher C.; Shapiro, Beth
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errSave
Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial (vol 8, pg 1311, 2024)
errNATURE ECOLOGY & EVOLUTION
IF14.5
err2024-07-29
err0
errOAAI
errHogg, Carolyn J.; Edwards, Richard J.; Farquharson, Katherine A.; Silver, Luke W.; Brandies, Parice; Peel, Emma; Escalona, Merly; Jaya, Frederick R.; Thavornkanlapachai, Rujiporn; Batley, Kimberley; Bradford, Tessa M.; Chang, J. King; Chen, Zhiliang; Deshpande, Nandan; Dziminski, Martin; Ewart, Kyle M.; Griffith, Oliver W.; Gual, Laia Marin; Moon, Katherine L.; Travouillon, Kenny J.; Waters, Paul; Whittington, Camilla M.; Wilkins, Marc R.; Helgen, Kristofer M.; Lo, Nathan; Ho, Simon Y. W.; Herrera, Aurora Ruiz; Paltridge, Rachel; Graves, Jennifer A. Marshall; Renfree, Marilyn; Shapiro, Beth; Ottewell, Kym; Gibson, Conway; Maxwell, Raymond; Spencer, Zecharia; Napangati, Yalti; Butler, Mary; West, Janine; West, John; James, Mantua; Napangati, Nolia; Gibson, Loretta; West, Payu; Gibson, Angus; West, Scott; West, Kim; Japaltjari, Walimpirri; Blackwood, Ed; Belov, Katherine
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errSave
A genome assembly of the American black bear, Ursus americanus, from California
errJOURNAL OF HEREDITY
IF2.5
err2024-07-15
err1
errOAAI
errSupple, Megan A.; Escalona, Merly; Adkins, Jillian; Buchalski, Michael R.; Alexandre, Nicolas; Sahasrabudhe, Ruta M.; Nguyen, Oanh; Sacco, Samuel; Fairbairn, Colin; Beraut, Eric; Seligmann, William; Green, Richard E.; Meredith, Erin; Shapiro, Beth
errShare
errSave
Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial
errNATURE ECOLOGY & EVOLUTION
IF14.5
err2024-07-01
err5
errOAAI
errHogg, Carolyn J.; Edwards, Richard J.; Farquharson, Katherine A.; Silver, Luke W.; Brandies, Parice; Peel, Emma; Escalona, Merly; Jaya, Frederick R.; Thavornkanlapachai, Rujiporn; Batley, Kimberley; Bradford, Tessa M.; Chang, J. King; Chen, Zhiliang; Deshpande, Nandan; Dziminski, Martin; Ewart, Kyle M.; Griffith, Oliver W.; Marin Gual, Laia; Moon, Katherine L.; Travouillon, Kenny J.; Waters, Paul; Whittington, Camilla M.; Wilkins, Marc R.; Helgen, Kristofer M.; Lo, Nathan; Ho, Simon Y. W.; Ruiz Herrera, Aurora; Paltridge, Rachel; Marshall Graves, Jennifer A.; Renfree, Marilyn; Shapiro, Beth; Ottewell, Kym; Gibson, Conway; Maxwell, Raymond; Spencer, Zecharia; Napangati, Yalti; Butler, Mary; West, Janine; West, John; James, Mantua; Napangati, Nolia; Gibson, Loretta; West, Payu; Gibson, Angus; West, Scott; West, Kim; Japaltjari, Walimpirri; Blackwood, Ed; Belov, Katherine
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errSave

Research Directions

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Co-authors
Cooperation Journals
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Edward C. Holmes
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Rasmus Nielsen
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Andrew Rambaut
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Eske Willerslev
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D
David Reich
H-index: 141 · Papers: 514
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