Robert A. Beagrie - Publications, H-index & Citations

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Robert A. Beagrie

university of oxford

14H-index

41Paper Count

1.3KCitation Count

Published Papers 15

Publication Date

Loop extrusion by cohesin plays a role in enhancer-activated gene expression early in differentiation

Nature Communications

IF15.7

2026-05-26

OAAI

Rosa J. Stolper; Felice H. Tsang; Emily Georgiades; Lars L. P. Hanssen; Edward A. J. Tunnacliffe; Damien J. Downes; Caroline L. Harrold; Jim R. Hughes; Robert A. Beagrie; Benjamin Davies; Mira T. Kassouf; Douglas R. Higgs

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Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C

NATURE METHODS

IF32.1

2023-06-19

OAAI

Beagrie, Robert A. A.; Thieme, Christoph J. J.; Annunziatella, Carlo; Baugher, Catherine; Zhang, Yingnan; Schueler, Markus; Kukalev, Alexander; Kempfer, Rieke; Chiariello, Andrea M. M.; Bianco, Simona; Li, Yichao; Davis, Trenton; Scialdone, Antonio; Welch, Lonnie R. R.; Nicodemi, Mario; Pombo, Ana

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Pathogenic human variant that dislocates GATA2 zinc fingers disrupts hematopoietic gene expression and signaling networks

JOURNAL OF CLINICAL INVESTIGATION

IF13.6

2023-04-03

OAAI

Jung, Mabel Minji; Shen, Siqi; Botten, Giovanni A.; Olender, Thomas; Katsumura, Koichi R.; Johnson, Kirby D.; Soukup, Alexandra A.; Liu, Peng; Zhang, Qingzhou; Jensvold, Zena D.; Lewis, Peter W.; Beagrie, Robert A.; Low, Jason K. K.; Yang, Lihua; Mackay, Joel P.; Godley, Lucy A.; Brand, Marjorie; Xu, Jian; Keles, Sunduz; Bresnick, Emery H.

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Gene silencing dynamics are modulated by transiently active regulatory elements

MOLECULAR CELL

IF16.6

2023-03-01

OAAI

Vermunt, Marit W.; Luan, Jing; Zhang, Zhe; Thrasher, A. Josephine; Huang, Anran; Saari, Megan S.; Khandros, Eugene; Beagrie, Robert A.; Zhang, Shiping; Vemulamada, Pranay; Brilleman, Matilda; Lee, Kiwon; Yano, Jennifer A.; Giardine, Belinda M.; Keller, Cheryl A.; Hardison, Ross C.; Blobel, Gerd A.

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Making connections: enhancers in cellular differentiation

TRENDS IN GENETICS

IF16.3

2022-04-01

PREAI

Herrmann, Jennifer C.; Beagrie, Robert A.; Hughes, Jim R.

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Reactivation of a developmentally silenced embryonic globin gene

NATURE COMMUNICATIONS

IF15.7

2021-07-21

OAAI

King, Andrew J.; Songdej, Duantida; Downes, Damien J.; Beagrie, Robert A.; Liu, Siyu; Buckley, Megan; Hua, Peng; Suciu, Maria C.; Oudelaar, A. Marieke; Hanssen, Lars L. P.; Jeziorska, Danuta; Roberts, Nigel; Carpenter, Stephanie J.; Francis, Helena; Telenius, Jelena; Olijnik, Aude-Anais; Sharpe, Jacqueline A.; Sloane-Stanley, Jacqueline; Eglinton, Jennifer; Kassouf, Mira T.; Orkin, Stuart H.; Pennacchio, Len A.; Davies, James O. J.; Hughes, Jim R.; Higgs, Douglas R.; Babbs, Christian

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The mouse alpha-globin cluster: a paradigm for studying genome regulation and organization

CURRENT OPINION IN GENETICS & DEVELOPMENT

IF3.6

2021-04-01

OAAI

Oudelaar, A. Marieke; Beagrie, Robert A.; Kassouf, Mira T.; Higgs, Douglas R.

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Enhancers predominantly regulate gene expression during differentiation via transcription initiation

MOLECULAR CELL

IF16.6

2021-03-01

OAAI

Larke, Martin S. C.; Schwessinger, Ron; Nojima, Takayuki; Telenius, Jelena; Beagrie, Robert A.; Downes, Damien J.; Oudelaar, A. Marieke; Truch, Julia; Graham, Bryony; Bender, M. A.; Proudfoot, Nicholas J.; Higgs, Douglas R.; Hughes, Jim R.

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High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale

NATURE COMMUNICATIONS

IF15.7

2021-01-22

OAAI

Downes, Damien J.; Beagrie, Robert A.; Gosden, Matthew E.; Telenius, Jelena; Carpenter, Stephanie J.; Nussbaum, Lea; De Ornellas, Sara; Sergeant, Martin; Eijsbouts, Chris Q.; Schwessinger, Ron; Kerry, Jon; Roberts, Nigel; Shivalingam, Arun; El-Sagheer, Afaf; Oudelaar, A. Marieke; Brown, Tom; Buckle, Veronica J.; Davies, James O. J.; Hughes, Jim R.

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Hypoxia Induces Transcriptional and Translational Downregulation of the Type I IFN Pathway in Multiple Cancer Cell Types

CANCER RESEARCH

IF16.6

2020-12-02

OAAI

Miar, Ana; Arnaiz, Esther; Bridges, Esther; Beedie, Shaunna; Cribbs, Adam P.; Downes, Damien J.; Beagrie, Robert A.; Rehwinkel, Jan; Harris, Adrian L.

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Recapitulation of erythropoiesis in congenital dyserythropoietic anemia type I (CDA-I) identifies defects in differentiation and nucleolar abnormalities

HAEMATOLOGICA

IF7.9

2020-10-29

OAAI

Scott, Caroline; Downes, Damien J.; Brown, Jill M.; Beagrie, Robert; Olijnik, Aude-Anais; Gosden, Matthew; Schwessinger, Ron; Fisher, Christopher A.; Rose, Anna; Ferguson, David J. P.; Johnson, Errin; Hill, Quentin A.; Okoli, Steven; Renella, Raffaele; Ryan, Kate; Brand, Marjorie; Hughes, Jim; Roy, Noemi B. A.; Higgs, Douglas R.; Babbs, Christian; Buckle, Veronica J.

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Dynamics of the 4D genome during in vivo lineage specification and differentiation

NATURE COMMUNICATIONS

IF15.7

2020-06-01

OAAI

Oudelaar, A. Marieke; Beagrie, Robert A.; Gosden, Matthew; de Ornellas, Sara; Georgiades, Emily; Kerry, Jon; Hidalgo, Daniel; Carrelha, Joana; Shivalingam, Arun; El-Sagheer, Afaf H.; Telenius, Jelena M.; Brown, Tom; Buckle, Veronica J.; Socolovsky, Merav; Higgs, Douglas R.; Hughes, Jim R.

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Continuous chromatin changes

NATURE

IF48.5

2017-07-06

OAAI

Beagrie, Robert A.; Pombo, Ana

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Examining Topological Domain Influence on Enhancer Function

DEVELOPMENTAL CELL

IF8.7

2016-12-01