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Alla Lapidus

independent researcher

85H-index
554Paper Count
4.2WCitation Count
Published Papers 70
Publication Date
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Isolation of Methanotrophic Consortium from Chernevaya Taiga Soil and Laboratory Research on Its Introduction into Agro-Soil
errMicroorganisms
IF4.2
err2026-03-03
err0
errOAAI
errIrina K. Kravchenko; Liana G. Gogmachadze; Aleksei O. Zverev; Marina V. Sukhacheva; Alla L. Lapidus
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Metagenomic insights into the development of microbial communities of straw and leaf composts
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2025-01-22
err0
errOAAI
errKimeklis, Anastasiia K.; Gladkov, Grigory V.; Orlova, Olga V.; Lisina, Tatiana O.; Afonin, Alexey M.; Aksenova, Tatiana S.; Kichko, Arina A.; Lapidus, Alla L.; Abakumov, Evgeny V.; Andronov, Evgeny E.
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Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
errMICROORGANISMS
IF4.2
err2024-12-16
err0
errOAAI
errRayko, Mikhail; Kravchenko, Irina; Lapidus, Alla
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Creation of Cellulolytic Communities of Soil Microorganisms-A Search for Optimal Approaches
errMICROORGANISMS
IF4.2
err2024-11-09
err1
errOAAI
errZverev, Aleksei O.; Kimeklis, Anastasiia K.; Orlova, Olga V.; Lisina, Tatiana O.; Kichko, Arina A.; Pinaev, Alexandr G.; Lapidus, Alla L.; Abakumov, Evgeny V.; Andronov, Evgeny E.
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Analysis of rhizosphere fungal community of agricultural crops cultivated in laboratory experiments on Chernevaya taiga soil
errWORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
IF4.2
err2023-12-07
err0
errOAAI
errKravchenko, Irina; Rayko, Mikhail; Sokornova, Sophie; Tikhonova, Ekaterina; Konopkin, Aleksey; Lapidus, Alla
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Accurate isoform discovery with IsoQuant using long reads
errNATURE BIOTECHNOLOGY
IF41.7
err2023-01-02
err42
errOAAI
errPrjibelski, Andrey D.; Mikheenko, Alla; Joglekar, Anoushka; Smetanin, Alexander; Jarroux, Julien; Lapidus, Alla L.; Tilgner, Hagen U.
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Editorial: Rising stars in Evolutionary and Genomic Microbiology: 2022
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2022-12-16
err0
errOAAI
errLapidus, Alla; Perez-Rueda, Ernesto
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Agricultural Crops Grown in Laboratory Conditions on Chernevaya Taiga Soil Demonstrate Unique Composition of the Rhizosphere Microbiota
errMICROORGANISMS
IF4.2
err2022-10-31
err10
errOAAI
errKravchenko, Irina; Rayko, Mikhail; Tikhonova, Ekaterina; Konopkin, Aleksey; Abakumov, Evgeny; Lapidus, Alla
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MetaGT: A pipeline for de novo assembly of metatranscriptomes with the aid of metagenomic data
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2022-10-28
err5
errOAAI
errShafranskaya, Daria; Kale, Varsha; Finn, Rob; Lapidus, Alla L.; Korobeynikov, Anton; Prjibelski, Andrey D.
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Distribution of Molecular Weight of Humic Substances Isolated from Soils of Tallgrass Temperate Rainforests (Chernevaya Taiga)
errAGRONOMY-BASEL
IF3.4
err2022-07-27
err7
errOAAI
errPolyakov, Vyacheslav; Abakumov, Evgeny; Lodygin, Evgeny; Vasilevich, Roman; Lapidus, Alla
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Elemental and Molecular Composition of Humic Acids Isolated from Soils of Tallgrass Temperate Rainforests (Chernevaya taiga) by 1H-13C HECTCOR NMR Spectroscopy
errAGRONOMY-BASEL
IF3.4
err2021-10-01
err9
errOAAI
errPolyakov, Vyacheslav; Loiko, Sergey; Istigechev, Georgiy; Lapidus, Alla; Abakumov, Evgeny
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Metagenomic Data Assembly - The Way of Decoding Unknown Microorganisms
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2021-03-23
err81
errOAAI
errLapidus, Alla L.; Korobeynikov, Anton I.
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Genomic Variations in Drug Resistant Mycobacterium tuberculosis Strains Collected from Patients with Different Localization of Infection
errANTIBIOTICS-BASEL
IF4.6
err2020-12-31
err3
errOAAI
errChernyaeva, Ekaterina; Rotkevich, Mikhail; Krasheninnikova, Ksenia; Lapidus, Alla; Polev, Dmitrii E.; Solovieva, Natalia; Zhuravlev, Viacheslav; Yablonsky, Piotr; O'Brien, Stephen J.
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Mixotrophic Iron-Oxidizing Thiomonas Isolates from an Acid Mine Drainage-Affected Creek
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2020-11-24
err11
errOAAI
errAkob, Denise M.; Hallenbeck, Michelle; Beulig, Felix; Fabisch, Maria; Kuesel, Kirsten; Keffer, Jessica L.; Woyke, Tanja; Shapiro, Nicole; Lapidus, Alla; Klenk, Hans-Peter; Chan, Clara S.
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A New Thioalkalivibrio sp. Strain Isolated from Petroleum-Contaminated Brackish Estuary Sediments: A New Candidate for Bio-Based Application for Sulfide Oxidation in Halo-Alkaline Conditions
errWATER
IF3
err2020-05-13
err1
errOAAI
errBecarelli, Simone; La China, Salvatore; Lapidus, Alla; Prijibelski, Andrey; Polev, Dmitrii; Petroni, Giulio; Di Gregorio, Simona
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MGnify: the microbiome analysis resource in 2020
errNUCLEIC ACIDS RESEARCH
IF13.1
err2019-11-07
err373
errOAAI
errMitchell, Alex L.; Almeida, Alexandre; Beracochea, Martin; Boland, Miguel; Burgin, Josephine; Cochrane, Guy; Crusoe, Michael R.; Kale, Varsha; Potter, Simon C.; Richardson, Lorna J.; Sakharova, Ekaterina; Scheremetjew, Maxim; Korobeynikov, Anton; Shlemov, Alex; Kunyayskaya, Olga; Lapidus, Alla; Finn, Robert D.
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rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data
errGIGASCIENCE
IF3.9
err2019-09-03
err438
errOAAI
errBushmanova, Elena; Antipov, Dmitry; Lapidus, Alla; Prjibelski, Andrey D.
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errSave
Plasmid detection and assembly in genomic and metagenomic data sets
errGENOME RESEARCH
IF5.5
err2019-05-02
err106
errOAAI
errAntipov, Dmitry; Raiko, Mikhail; Lapidus, Alla; Pevzner, Pavel A.
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Autoprobiotics as an Approach for Restoration of Personalised Microbiota
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2018-09-12
err19
errOAAI
errSuvorov, Alexander; Karaseva, Alena; Kotyleva, Marina; Kondratenko, Yulia; Lavrenova, Nadezhda; Korobeynikov, Anton; Kozyrev, Petr; Kramskaya, Tatiana; Leontieva, Galina; Kudryavtsev, Igor; Guo, Danyang; Lapidus, Alla; Ermolenko, Elena
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Minimum information about a single amplified genome (MISAG) and a metagenome- assembled genome (MIMAG) of bacteria and archaea (vol 35, pg 725, 2017)
errNATURE BIOTECHNOLOGY
IF41.7
err2018-07-06
err13
errOAAI
errBowers, Robert M.; Kyrpides, Nikos C.; Stepanauskas, Ramunas; Harmon-Smith, Miranda; Doud, Devin; Reddy, T. B. K.; Schulz, Frederik; Jarett, Jessica; Rivers, Adam R.; Eloe-Fadrosh, Emiley A.; Tringe, Susannah G.; Ivanova, Natalia N.; Copeland, Alex; Clum, Alicia; Becraft, Eric D.; Malmstrom, Rex R.; Birren, Bruce; Podar, Mircea; Bork, Peer; Weinstock, George M.; Garrity, George M.; Dodsworth, Jeremy A.; Yooseph, Shibu; Sutton, Granger; Glockner, Frank O.; Gilbert, Jack A.; Nelson, William C.; Hallam, Steven J.; Jungbluth, Sean P.; Ettema, Thijs J. G.; Tighe, Scott; Konstantinidis, Konstantinos T.; Liu, Wen-Tso; Baker, Brett J.; Rattei, Thomas; Eisen, Jonathan A.; Hedlund, Brian; McMahon, Katherine D.; Fierer, Noah; Knight, Rob; Finn, Rob; Cochrane, Guy; Karsch-Mizrachi, Ilene; Tyson, Gene W.; Rinke, Christian; Lapidus, Alla; Meyer, Folker; Yilmaz, Pelin; Parks, Donovan H.; Eren, A. M.; Schriml, Lynn; Banfield, Jillian F.; Hugenholtz, Philip; Woyke, Tanja
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Research Directions

The data has not been retrieved yet.
Co-authors
Cooperation Journals
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Rob Knight
H-index: 255 · Papers: 1.8K
P
Peer Bork
H-index: 233 · Papers: 950
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Richard A. Gibbs
H-index: 190 · Papers: 1.3K
J
Julian Parkhill
H-index: 177 · Papers: 1.1K
B
Bernard Henrissat
H-index: 170 · Papers: 1.1K
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