Nathaniel D. Tippens - Publications, H-index & Citations

Nathaniel D. Tippens

Johns Hopkins University School of Medicine

13H指数

37论文数

1.5K被引数

收录论文 15

发表时间

Dual promoter–enhancer activities reflect a unified regulatory logic 双启动子-增强子活性体现了统一的调控逻辑

Nature Communications

IF15.7

2026-01-30

OAAI

Mauricio I. Paramo; Alden King-Yung Leung; Sagar R. Shah; Junke Zhang; Nathaniel D. Tippens; Jin Liang; Li Yao; Yiyang Jin; Xiuqi Pan; Abdullah Ozer; John T. Lis; Haiyuan Yu

Comprehensive evaluation of diverse massively parallel reporter assays to functionally characterize human enhancers genome-wide 对多种大规模并行报告者分析进行综合评估，以在全基因组范围内功能表征人类增强子。

Genome Biology

IF9.4

2025-11-04

OAAI

Junke Zhang; Alden King-Yung Leung; Yutong Zhu; Li Yao; Avery Willis; Xiuqi Pan; Abdullah Ozer; Zhou Zhou; Keith Siklenka; Alejandro Barrera; Jin Liang; Nathaniel D. Tippens; Timothy E. Reddy; John T. Lis; Haiyuan Yu

Science Signaling

IF6.6

2025-05-27

PREAI

Sagar R. Shah; Chunxiao Ren; Nathaniel D. Tippens; JinSeok Park; Ahmed Mohyeldin; Shuyan Wang; Guillermo Vela; Juan C. Martinez-Gutierrez; Seth S. Margolis; Susanne Schmidt; Alfredo Quiñones-Hinojosa; Andre Levchenko

Autocatalytic base editing for RNA-responsive translational control

NATURE COMMUNICATIONS

IF15.7

2023-03-11

OAAI

Gayet, Raphael V.; Ilia, Katherine; Razavi, Shiva; Tippens, Nathaniel D.; Lalwani, Makoto A.; Zhang, Kehan; Chen, Jack X.; Chen, Jonathan C.; Vargas-Asencio, Jose; Collins, James J.

RNA-responsive elements for eukaryotic translational control

NATURE BIOTECHNOLOGY

IF41.7

2021-10-28

OAAI

Zhao, Evan M.; Mao, Angelo S.; de Puig, Helena; Zhang, Kehan; Tippens, Nathaniel D.; Tan, Xiao; Ran, F. Ann; Han, Isaac; Nguyen, Peter Q.; Chory, Emma J.; Hua, Tiffany Y.; Ramesh, Pradeep; Thompson, David B.; Oh, Crystal Yuri; Zigon, Eric S.; English, Max A.; Collins, James J.

Transcription imparts architecture, function and logic to enhancer units

NATURE GENETICS

IF31.8

2020-09-21

OAAI

Tippens, Nathaniel D.; Liang, Jin; Leung, Alden King-Yung; Wierbowski, Shayne D.; Ozer, Abdullah; Booth, James G.; Lis, John T.; Yu, Haiyuan

A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice 大规模并行条形码测序流程可以生成水稻的第一个ORFeome和interactome图谱

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-05-12

OAAI

Wierbowski, Shayne D.; Vo, Tommy V.; Falter-Braun, Pascal; Jobe, Timothy O.; Kruse, Lars H.; Wei, Xiaomu; Liang, Jin; Meyer, Michael J.; Akturk, Nurten; Rivera-Erick, Christen A.; Cordero, Nicolas A.; Paramo, Mauricio I.; Shayhidin, Elnur E.; Bertolotti, Marta; Tippens, Nathaniel D.; Akther, Kazi; Sharma, Rita; Katayose, Yuichi; Salehi-Ashtiani, Kourosh; Hao, Tong; Ronald, Pamela C.; Ecker, Joseph R.; Schweitzer, Peter A.; Kikuchi, Shoshi; Mizuno, Hiroshi; Hill, David E.; Vidal, Marc; Moghe, Gaurav D.; McCouch, Susan R.; Yu, Haiyuan

Nascent RNA analyses: tracking transcription and its regulation 新生RNA分析: 跟踪转录及其调控

NATURE REVIEWS GENETICS

IF52

2019-08-09

175

OAAI

Wissink, Erin M.; Vihervaara, Anniina; Tippens, Nathaniel D.; Lis, John T.

methyl-ATAC-seq measures DNA methylation at accessible chromatin

GENOME RESEARCH

IF5.5

2019-06-03

OAAI

Spektor, Roman; Tippens, Nathaniel D.; Mimoso, Claudia A.; Soloway, Paul D.

Single-molecule nascent RNA sequencing identifies regulatory domain architecture at promoters and enhancers

NATURE GENETICS

IF31.8

2018-10-22

OAAI

Tome, Jacob M.; Tippens, Nathaniel D.; Lis, John T.

Nascent RNA sequencing reveals a dynamic global transcriptional response at genes and enhancers to the natural medicinal compound celastrol 新生RNA测序揭示了基因和增强子对天然药物雷公藤红素的动态全局转录反应

GENOME RESEARCH

IF5.5

2017-10-12

OAAI

Dukler, Noah; Booth, Gregory T.; Huang, Yi-Fei; Tippens, Nathaniel; Waters, Colin T.; Danko, Charles G.; Lis, John T.; Siepel, Adam

Brachyury-YAP Regulatory Axis Drives Stemness and Growth in Cancer

CELL REPORTS

IF6.9

2017-10-01

OAAI

Shah, Sagar R.; David, Justin M.; Tippens, Nathaniel D.; Mohyeldin, Ahmed; Martinez-Gutierrez, Juan C.; Ganaha, Sara; Schiapparelli, Paula; Hamilton, Duane H.; Palena, Claudia; Levchenko, Andre; Quinones-Hinojosa, Alfredo

iRegNet3D: three-dimensional integrated regulatory network for the genomic analysis of coding and non-coding disease mutations

GENOME BIOLOGY

IF9.4

2017-01-18

OAAI

Liang, Siqi; Tippens, Nathaniel D.; Zhou, Yaoda; Mort, Matthew; Stenson, Peter D.; Cooper, David N.; Yu, Haiyuan

A NOVEL YAP-DRIVEN MIGRATION AND INVASION SIGNALING PATHWAY PREDICTS POOR OUTCOME IN GLIOBLASTOMA

NEURO-ONCOLOGY

IF13.4

2014-11-03

OAAI

Shah, Sagar R.; Tippens, Nathaniel D.; Park, Jinseok; Mohyeldin, Ahmed; Vela, Guillermo; Levchenko, Andre; Quinones-Hinojosa, Alfredo