未登录An ELIXIR scoping review on domain-specific evaluation metrics for synthetic data in life sciencesELIXIR范围综述：生命科学中合成数据的领域特定评估指标
Fragkouli, Styliani-Christina; Iqbal, Somya; Crossman, Lisa; Gravel, Barbara; Masued, Nagat; Onders, Mark; Haseja, Devesh; Stikkelman, Alex; Valencia, Alfonso; Lenaerts, Tom; Psomopoulos, Fotis; Broin, Pilib O.; Queralt-Rosinach, Nuria; Cirillo, Davide .png)
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收藏分享 收藏 Antigen selection reflected in the subclonal architecture of the B-cell receptor immunoglobulin gene repertoire in splenic marginal zone lymphoma抗原选择反映在脾边缘区淋巴瘤中b细胞受体免疫球蛋白基因库的亚克隆结构中Zaragoza-Infante, Laura; Agathangelidis, Andreas; Iatrou, Anastasia; Junet, Valentin; Pechlivanis, Nikos; Karypidou, Maria; Koletsa, Triantafyllia; Karakatsoulis, Giorgos; Bruscaggin, Alessio; Davis, Zadie; Spina, Valeria; Verney, Aurelie; Polychronidou, Eleftheria; Psomopoulos, Fotis; Oscier, David; Traverse-Glehen, Alexandra; Papaioannou, Maria; Ghia, Paolo; Rossi, Davide; Chatzidimitriou, Anastasia; Stamatopoulos, Kostas 分享 收藏 分享 收藏 DOME Registry: implementing community-wide recommendations for reporting supervised machine learning in biologyAttafi, Omar Abdelghani; Clementel, Damiano; Kyritsis, Konstantinos; Capriotti, Emidio; Farrell, Gavin; Fragkouli, Styliani-Christina; Castro, Leyla Jael; Hatos, Andras; Lenaerts, Tom; Mazurenko, Stanislav; Mozaffari, Soroush; Pradelli, Franco; Ruch, Patrick; Savojardo, Castrense; Turina, Paola; Zambelli, Federico; Piovesan, Damiano; Monzon, Alexander Miguel; Psomopoulos, Fotis; Tosatto, Silvio C. E. 分享 收藏 Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data跟踪废水中关注的SARS-CoV-2变体: 使用模拟基因组数据评估九种计算工具Sutcliffe, Steven G.; Kraemer, Susanne A.; Ellmen, Isaac; Knapp, Jennifer J.; Overton, Alyssa K.; Nash, Delaney; Nissimov, Jozef I.; Charles, Trevor C.; Dreifuss, David; Topolsky, Ivan; Baykal, Pelin I.; Fuhrmann, Lara; Jablonski, Kim P.; Beerenwinkel, Niko; Levy, Joshua I.; Olabode, Abayomi S.; Becker, Devan G.; Gugan, Gopi; Brintnell, Erin; Poon, Art F. Y.; Valieris, Renan; Drummond, Rodrigo D.; Defelicibus, Alexandre; Dias-Neto, Emmanuel; Rosales, Rafael A.; da Silva, Israel Tojal; Orfanou, Aspasia; Psomopoulos, Fotis; Pechlivanis, Nikolaos; Pipes, Lenore; Chen, Zihao; Baaijens, Jasmijn A.; Baym, Michael; Shapiro, B. Jesse 分享 收藏 IκBε deficiency accelerates disease development in chronic lymphocytic leukemiaBordini, Jessica; Lenzi, Chiara; Frenquelli, Michela; Morabito, Alessia; Pseftogas, Athanasios; Belloni, Daniela; Mansouri, Larry; Tsiolas, George; Perotta, Eleonora; Ranghetti, Pamela; Gandini, Francesca; Genova, Francesca; Hagerstrand, Daniel; Gavriilidis, Georgios; Keisaris, Sofoklis; Pechlivanis, Nikolaos; Davi, Frederic; Kay, Neil E.; Langerak, Anton W.; Pospisilova, Sarka; Scarfo, Lydia; Makris, Antonios; Psomopoulos, Fotis E.; Stamatopoulos, Kostas; Rosenquist, Richard; Campanella, Alessandro; Ghia, Paolo 分享 收藏 Intranuclear inclusions of polyQ-expanded ATXN1 sequester RNA moleculesGkekas, Ioannis; Vagiona, Aimilia-Christina; Pechlivanis, Nikolaos; Kastrinaki, Georgia; Pliatsika, Katerina; Iben, Sebastian; Xanthopoulos, Konstantinos; Psomopoulos, Fotis E.; Andrade-Navarro, Miguel A.; Petrakis, Spyros 分享 收藏 分享 收藏 Clonotype definitions for immunogenetic studies: proposals from the EuroClonality NGS Working GroupSofou, Electra; Vlachonikola, Elisavet; Zaragoza-Infante, Laura; Brueggemann, Monika; Darzentas, Nikos; Groenen, Patricia J. T. A.; Hummel, Michael; Macintyre, Elizabeth A.; Psomopoulos, Fotis; Davi, Frederic; Langerak, Anton W.; Stamatopoulos, Kostas 分享 收藏 T cell receptor gene repertoire profiles in subgroups of patients with chronic lymphocytic leukemia bearing distinct genomic aberrationsVlachonikola, Elisavet; Pechlivanis, Nikolaos; Karakatsoulis, Georgios; Sofou, Electra; Gkoliou, Glykeria; Jeromin, Sabine; Stavroyianni, Niki; Ranghetti, Pamela; Scarfo, Lydia; Osterholm, Cecilia; Mansouri, Larry; Notopoulou, Sofia; Siorenta, Alexandra; Anagnostopoulos, Achilles; Ghia, Paolo; Haferlach, Claudia; Rosenquist, Richard; Psomopoulos, Fotis; Kouvatsi, Anastasia; Baliakas, Panagiotis; Stamatopoulos, Kostas; Chatzidimitriou, Anastasia 分享 收藏 Evidence of somatic hypermutation in the antigen binding sites of patients with CLL harboring IGHV genes with 100% germline identitySofou, Electra; Zaragoza-Infante, Laura; Pechlivanis, Nikolaos; Karakatsoulis, Georgios; Notopoulou, Sofia; Stavroyianni, Niki; Psomopoulos, Fotis; Georgiou, Elisavet; de Septenville, Anne Langlois; Davi, Frederic; Agathangelidis, Andreas; Chatzidimitriou, Anastasia; Stamatopoulos, Kostas 分享 收藏 IgIDivA: immunoglobulin intraclonal diversification analysisZaragoza-Infante, Laura; Junet, Valentin; Pechlivanis, Nikos; Fragkouli, Styliani-Christina; Amprachamian, Serovpe; Koletsa, Triantafyllia; Chatzidimitriou, Anastasia; Papaioannou, Maria; Stamatopoulos, Kostas; Agathangelidis, Andreas; Psomopoulos, Fotis 分享 收藏 The TAp63/BCL2 axis represents a novel mechanism of clinical aggressiveness in chronic lymphocytic leukemiaLaidou, Stamatia; Grigoriadis, Dionysios; Papanikolaou, Sofia; Foutadakis, Spyros; Ntoufa, Stavroula; Tsagiopoulou, Maria; Vatsellas, Giannis; Anagnostopoulos, Achilles; Kouvatsi, Anastasia; Stavroyianni, Niki; Psomopoulos, Fotis; Makris, Antonios M.; Agelopoulos, Marios; Thanos, Dimitris; Chatzidimitriou, Anastasia; Papakonstantinou, Nikos; Stamatopoulos, Kostas 分享 收藏 The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update用于可访问，可复制和协作生物医学分析的Galaxy平台: 2022更新Ostrovsky, Alexander E.; Mahmoud, Alexandru; Lonie, Andrew J.; Syme, Anna; Fouilloux, Anne; Bretaudeau, Anthony; Nekrutenko, Anton; Kumar, Anup; Eschenlauer, Arthur C.; DeSanto, Assunta D.; Guerler, Aysam; Serrano-Solano, Beatriz; Batut, Berenice; Gruening, Bjoern A.; Langhorst, Bradley W.; Carr, Bridget; Raubenolt, Bryan A.; Hyde, Cameron J.; Bromhead, Catherine J.; Barnett, Christopher B.; Royaux, Coline; Gallardo, Cristobal; Blankenberg, Daniel; Fornika, Daniel J.; Baker, Dannon; Bouvier, Dave; Clements, Dave; Morais, David A. de Lima; Tabernero, David Lopez; Lariviere, Delphine; Nasr, Engy; Afgan, Enis; Zambelli, Federico; Heyl, Florian; Psomopoulos, Fotis; Coppens, Frederik; Price, Gareth R.; Cuccuru, Gianmauro; Le Corguille, Gildas; Von Kuster, Greg; Akbulut, Gulsum Gudukbay; Rasche, Helena; Hans-Rudolf, Hotz; Eguinoa, Ignacio; Makunin, Igor; Ranawaka, Isuru J.; Taylor, James P.; Joshi, Jayadev; Hillman-Jackson, Jennifer; Goecks, Jeremy; Chilton, John M.; Kamali, Kaivan; Suderman, Keith; Poterlowicz, Krzysztof; Yvan, Le Bras; Lopez-Delisle, Lucille; Sargent, Luke; Bassetti, Madeline E.; Tangaro, Marco Antonio; van den Beek, Marius; Cech, Martin; Bernt, Matthias; Fahrner, Matthias; Tekman, Mehmet; Foell, Melanie C.; Schatz, Michael C.; Crusoe, Michael R.; Roncoroni, Miguel; Kucher, Natalie; Coraor, Nate; Stoler, Nicholas; Rhodes, Nick; Soranzo, Nicola; Pinter, Niko; Goonasekera, Nuwan A.; Moreno, Pablo A.; Videm, Pavankumar; Melanie, Petera; Mandreoli, Pietro; Jagtap, Pratik D.; Gu, Qiang; Weber, Ralf J. M.; Lazarus, Ross; Vorderman, Ruben H. P.; Hiltemann, Saskia; Golitsynskiy, Sergey; Garg, Shilpa; Bray, Simon A.; Gladman, Simon L.; Leo, Simone; Mehta, Subina P.; Griffin, Timothy J.; Jalili, Vahid; Yves, Vandenbrouck; Wen, Victor; Nagampalli, Vijay K.; Bacon, Wendi A.; de Koning, Willem; Maier, Wolfgang; Briggs, Peter J. 分享 收藏 Detecting SARS-CoV-2 lineages and mutational load in municipal wastewater and a use-case in the metropolitan area of Thessaloniki, GreecePechlivanis, Nikolaos; Tsagiopoulou, Maria; Maniou, Maria Christina; Togkousidis, Anastasis; Mouchtaropoulou, Evangelia; Chassalevris, Taxiarchis; Chaintoutis, Serafeim C.; Petala, Maria; Kostoglou, Margaritis; Karapantsios, Thodoris; Laidou, Stamatia; Vlachonikola, Elisavet; Chatzidimitriou, Anastasia; Papadopoulos, Agis; Papaioannou, Nikolaos; Dovas, Chrysostomos, I; Argiriou, Anagnostis; Psomopoulos, Fotis 分享 收藏 分享 收藏 DOME: recommendations for supervised machine learning validation in biology (Jul, 10.1038/s41592-021-01205-4, 2021)Walsh, Ian; Fishman, Dmytro; Garcia-Gasulla, Dario; Titma, Tiina; Pollastri, Gianluca; Harrow, Jennifer; Psomopoulos, Fotis E.; Tosatto, Silvio C. E. 分享 收藏 分享 收藏 
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