Zaida Luthey‐Schulten - Publications, H-index & Citations

Zaida Luthey‐Schulten

University of Illinois System

56H指数

216论文数

1.6W被引数

收录论文 80

发表时间

Assembly of Macromolecular Complexes in the Whole-Cell Model of a Minimal Cell

JOURNAL OF PHYSICAL CHEMISTRY B

IF2.9

2025-12-01

PREAI

Fu, Enguang; Thornburg, Zane R.; Brier, Troy A.; Wei, Rong; Yuan, Bo; Gilbert, Benjamin R.; Wang, Shulei; Luthey-Schulten, Zaida

Molecular dynamics simulation of an entire cell 整个细胞的分子动力学模拟

FRONTIERS IN CHEMISTRY

IF4.2

2023-01-18

OAAI

Stevens, Jan A. A.; Grunewald, Fabian; van Tilburg, P. A. Marco; Koenig, Melanie; Gilbert, Benjamin R.; Brier, Troy A. A.; Thornburg, Zane R. R.; Luthey-Schulten, Zaida; Marrink, Siewert J. J.

Metabolite Damage and Damage Control in a Minimal Genome

MBIO

IF4.7

2022-08-30

OAAI

Haas, Drago; Thamm, Antje M.; Sun, Jiayi; Huang, Lili; Sun, Lijie; Beaudoin, Guillaume A. W.; Wise, Kim S.; Lerma-Ortiz, Claudia; Bruner, Steven D.; Breuer, Marian; Luthey-Schulten, Zaida; Lin, Jiusheng; Wilson, Mark A.; Brown, Greg; Yakunin, Alexander F.; Kurilyak, Inna; Folz, Jacob; Fiehn, Oliver; Glass, John I.; Hanson, Andrew D.; Henry, Christopher S.; de Crecy-Lagard, Valerie

Integrating cellular and molecular structures and dynamics into whole-cell models

CURRENT OPINION IN STRUCTURAL BIOLOGY

IF7

2022-08-01

OAAI

Luthey-Schulten, Zaida; Thornburg, Zane R.; Gilbert, Benjamin R.

Kinetic and structural mechanism for DNA unwinding by a non-hexameric helicase

NATURE COMMUNICATIONS

IF15.7

2021-12-01

OAAI

Carney, Sean P.; Ma, Wen; Whitley, Kevin D.; Jia, Haifeng; Lohman, Timothy M.; Luthey-Schulten, Zaida; Chemla, Yann R.

Generating Chromosome Geometries in a Minimal Cell From Cryo-Electron Tomograms and Chromosome Conformation Capture Maps

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2021-07-22

OAAI

Gilbert, Benjamin R.; Thornburg, Zane R.; Lam, Vinson; Rashid, Fatema-Zahra M.; Glass, John, I; Villa, Elizabeth; Dame, Remus T.; Luthey-Schulten, Zaida

Integrating experiments, theory and simulations into whole-cell models

NATURE METHODS

IF32.1

2021-05-07

PREAI

Luthey-Schulten, Zaida

Effects of individual base-pairs on in vivo target search and destruction kinetics of bacterial small RNA

NATURE COMMUNICATIONS

IF15.7

2021-02-08

OAAI

Poddar, Anustup; Azam, Muhammad S.; Kayikcioglu, Tunc; Bobrovskyy, Maksym; Zhang, Jichuan; Ma, Xiangqian; Labhsetwar, Piyush; Fei, Jingyi; Singh, Digvijay; Luthey-Schulten, Zaida; Vanderpool, Carin K.; Ha, Taekjip

Theoretical Description of the Primary Proton-Coupled Electron Transfer Reaction in the Cytochrome bc1 Complex

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2021-01-05

OAAI

Barragan, Angela M.; Soudackov, Alexander, V; Luthey-Schulten, Zaida; Hammes-Schiffer, Sharon; Schulten, Klaus; Solov'yov, Ilia A.

Stochastic Analysis Demonstrates the Dual Role of Hfq in Chaperoning E. coli Sugar Shock Response

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2020-12-23

OAAI

Bianchi, David M.; Brier, Troy A.; Poddar, Anustup; Azam, Muhammad S.; Vanderpool, Carin K.; Ha, Taekjip; Luthey-Schulten, Zaida

Generalized correlation-based dynamical network analysis: a new high-performance approach for identifying allosteric communications in molecular dynamics trajectories

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2020-10-01

OAAI

Melo, Marcelo C. R.; Bernardi, Rafael C.; de la Fuente-Nunez, Cesar; Luthey-Schulten, Zaida

Scalable molecular dynamics on CPU and GPU architectures with NAMD 使用NAMD在CPU和GPU架构上实现可扩展的分子动力学

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2020-07-30

1.9K

OAAI

Phillips, James C.; Hardy, David J.; Maia, Julio D. C.; Stone, John E.; Ribeiro, Joao, V; Bernardi, Rafael C.; Buch, Ronak; Fiorin, Giacomo; Henin, Jerome; Jiang, Wei; McGreevy, Ryan; Melo, Marcelo C. R.; Radak, Brian K.; Skeel, Robert D.; Singharoy, Abhishek; Wang, Yi; Roux, Benoit; Aksimentiev, Aleksei; Luthey-Schulten, Zaida; Kale, Laxmikant, V; Schulten, Klaus; Chipot, Christophe; Tajkhorshid, Emad

Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain

NATURE COMMUNICATIONS

IF15.7

2020-02-06

OAAI

Burt, Alister; Cassidy, C. Keith; Ames, Peter; Bacia-Verloop, Maria; Baulard, Megghane; Huard, Karine; Luthey-Schulten, Zaida; Desfosses, Ambroise; Stansfeld, Phillip J.; Margolin, William; Parkinson, John S.; Gutsche, Irina

Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations

COMMUNICATIONS BIOLOGY

IF5.1

2020-01-10

OAAI

Cassidy, C. Keith; Himes, Benjamin A.; Sun, Dapeng; Ma, Jun; Zhao, Gongpu; Parkinson, John S.; Stansfeld, Phillip J.; Luthey-Schulten, Zaida; Zhang, Peijun

Kinetic Modeling of the Genetic Information Processes in a Minimal Cell 最小细胞中遗传信息过程的动力学模型

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2019-11-28

OAAI

Thornburg, Zane R.; Melo, Marcelo C. R.; Bianchi, David; Brier, Troy A.; Crotty, Cole; Breuer, Marian; Smith, Hamilton O.; Hutchison, Clyde A., III; Glass, John I.; Luthey-Schulten, Zaida

Mechanisms of Nanonewton Mechanostability in a Protein Complex Revealed by Molecular Dynamics Simulations and Single-Molecule Force Spectroscopy

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2019-08-29

OAAI

Bernardi, Rafael C.; Durner, Ellis; Schoeler, Constantin; Malinowska, Klara H.; Carvalho, Bruna G.; Bayer, Edward A.; Luthey-Schulten, Zaida; Gaub, Hermann E.; Nash, Michael A.

In Situ Conformational Changes of the Escherichia coli Serine Chemoreceptor in Different Signaling States

MBIO

IF4.7

2019-08-27

OAAI

Yang, Wen; Cassidy, C. Keith; Ames, Peter; Diebolder, Christoph A.; Schulten, Klaus; Luthey-Schulten, Zaida; Parkinson, John S.; Briegel, Ariane

Membrane organization of photosystem I complexes in the most abundant phototroph on Earth

NATURE PLANTS

IF13.6

2019-07-22

OAAI

MacGregor-Chatwin, C.; Jackson, P. J.; Sener, M.; Chidgey, J. W.; Hitchcock, A.; Qian, P.; Mayneord, G. E.; Johnson, M. P.; Luthey-Schulten, Z.; Dickman, M. J.; Scanlan, D. J.; Hunter, C. N.

Towards Simulating Bacterial and Eukaryotic Cells: Integration of Experiment and Theory

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Luthey-Schulten, Zaida Ann

Integration of Reaction-Diffusion Master Equation and Brownian Dynamics Methodologies to Simulate a Minimal Cell

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Earnest, Tyler M.; Hallock, Michael J.; Luthey-Schulten, Zaida

研究方向