Qiqige Wuyun - Publications, H-index & Citations

Qiqige Wuyun

michigan state university

12H指数

36论文数

712被引数

收录论文 17

发表时间

Graph convolution network based on meta-paths and mutual information for drug-target interaction prediction 基于元路径和互信息的药物-靶点相互作用预测图卷积网络

BMC Bioinformatics

IF3.3

2025-11-09

OAAI

Shujuan Cao; Binying Cai; Zhejian Qiu; Tiantian Chang; Qiqige Wuyun; Fang-Xiang Wu

Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16 CASP16中RNA周围复杂水分子和离子集合的盲预测

Proteins: Structure, Function, and Bioinformatics

IF0

2025-11-08

PREAI

Rachael C. Kretsch; Elisa Posani; Eugene F. Baulin; Janusz M. Bujnicki; Giovanni Bussi; Thomas E. Cheatham III; Shi-Jie Chen; Arne Elofsson; Masoud Amiri Farsani; Olivia N. Fisher; M. Michael Gromiha; Ayush Gupta; Michiaki Hamada; K. Harini; Gang Hu; David Huang; Junichi Iwakiri; Anika Jain; Yuki Kagaya; Daisuke Kihara; Sebastian Kmiecik; Sowmya Ramaswamy Krishnan; Ikuo Kurisaki; Olivier Languin-Cattoën; Jun Li; Shanshan Li; Karim Malekzadeh; Tsukasa Nakamura; Wentao Ni; Chandran Nithin; Michael Z. Palo; Joon Hong Park; Smita P. Pilla; Simón Poblete; Fabrizio Pucci; Pranav Punuru; Anouka Saha; Kengo Sato; Ambuj Srivastava; Genki Terashi; Emilia Tugolukova; Jacob Verburgt; Qiqige Wuyun; Gül H. Zerze; Kaiming Zhang; Sicheng Zhang; Wei Zheng; Yuanzhe Zhou; Wah Chiu; David A. Case; Rhiju Das

16S rDNA-based detection technology: use in lambs infected with Nematodirus oiratianus to analyze changes in intestinal flora 16S rDNA技术检测：用于感染Nematodirus oiratianus的羔羊以分析肠道菌群变化

PARASITE

IF2.4

2025-09-15

OAAI

Li, Si-Yao; Hou, Bin; Wuyun, Qiqige; Eerdeni, Zhula; Zang, Dare; Hasi, Surong

Highlights of Model Quality Assessment in CASP16 CASP16模型质量评估的亮点

proteins structure function and bioinformatics

IF0

2025-08-14

PREAI

Alisia Fadini; Recep Adiyaman; Shaima N. Alhaddad; Behnosh Behzadi; Jianlin Cheng; Xinyue Cui; Nicholas S. Edmunds; Lydia Freddolino; Ahmet G. Genc; Fang Liang; Dong Liu; Jian Liu; Quancheng Liu; Liam J. McGuffin; Pawan Neupane; Chunxiang Peng; David R. Shortle; Meng Sun; Haodong Wang; Qiqige Wuyun; Guijun Zhang; Xuanfeng Zhao; Wei Zheng; Randy J. Read

Deep-learning-based single-domain and multidomain protein structure prediction with D-I-TASSER 基于深度学习的单域和多域蛋白质结构预测与D-I-TASSER

NATURE BIOTECHNOLOGY

IF41.7

2025-05-23

OAAI

Zheng, Wei; Wuyun, Qiqige; Li, Yang; Liu, Quancheng; Zhou, Xiaogen; Peng, Chunxiang; Zhu, Yiheng; Zhang, Yang

One step forward towards deep-learning protein complex structure prediction by precise multiple sequence alignment construction 通过精确的多序列比对构建向深度学习蛋白质复杂结构预测迈进了一步

CLINICAL AND TRANSLATIONAL MEDICINE

IF6.8

2024-06-16

OAAI

Zheng, Wei; Wuyun, Qiqige; Zhang, Yang

Odorant Receptor BdorOR49b Mediates Oviposition and Attraction Behavior of Bactrocera dorsalis to Benzothiazole

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

IF6.2

2024-04-01

PREAI

Zhang, Yan; Liu, Wei; Luo, Zhicai; Yuan, Jinxi; Wuyun, QiQige; Zhang, Panpan; Wang, Qi; Yang, Minghuan; Liu, Chenhao; Yan, Shanchun; Wang, Guirong

Recent Progress of Protein Tertiary Structure Prediction

MOLECULES

IF4.6

2024-02-13

OAAI

Wuyun, Qiqige; Chen, Yihan; Shen, Yifeng; Cao, Yang; Hu, Gang; Cui, Wei; Gao, Jianzhao; Zheng, Wei

Improving deep learning protein monomer and complex structure prediction using DeepMSA2 with huge metagenomics data

NATURE METHODS

IF32.1

2024-01-02

OAAI

Zheng, Wei; Wuyun, Qiqige; Li, Yang; Zhang, Chengxin; Freddolino, P. Lydia; Zhang, Yang

MFS Transporter Bdorwp Does Not Affect Antennal Electrophysiology but Regulates Reproductive Behaviors in Bactrocera dorsalis MFS转运蛋白Bdorwp不影响触角电生理，但调节背侧小实蝇的生殖行为

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

IF6.2

2023-11-01

PREAI

Zhang, Yan; Wuyun, Qiqige; Wang, Qi; Luo, Zhicai; Yuan, Jinxi; Zhang, Jie; Yan, Shanchun; Liu, Wei; Wang, Guirong

Integrating deep learning, threading alignments, and a multi-MSA strategy for high-quality protein monomer and complex structure prediction in CASP15 在CASP15中集成深度学习，线程比对和用于高质量蛋白质单体和复杂结构预测的多MSA策略

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2023-08-31

OAAI

Zheng, Wei; Wuyun, Qiqige; Freddolino, Peter L.; Zhang, Yang

LOMETS3: integrating deep learning and profile alignment for advanced protein template recognition and function annotation

NUCLEIC ACIDS RESEARCH

IF13.1

2022-04-14

OAAI

Zheng, Wei; Wuyun, Qiqige; Zhou, Xiaogen; Li, Yang; Freddolino, Peter L.; Zhang, Yang

An Application of Random Walk Resampling to Phylogenetic HMM Inference and Learning

IEEE TRANSACTIONS ON NANOBIOSCIENCE

IF4.4

2020-07-01

OAAI

Wang, Wei; Wuyun, Qiqige; Liu, Kevin J.

Two-Level Protein Methylation Prediction using structure model-based features

SCIENTIFIC REPORTS

IF3.9

2020-04-07

OAAI

Zheng, Wei; Wuyun, Qiqige; Cheng, Micah; Hu, Gang; Zhang, Yanping

Disentangling Population History and Character Evolution among Hybridizing Lineages

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2020-01-13

OAAI

Mullen, Sean P.; VanKuren, Nicholas W.; Zhang, Wei; Nallu, Sumitha; Kristiansen, Evan B.; Wuyun, Qiqige; Liu, Kevin; Hill, Ryan I.; Briscoe, Adriana D.; Kronforst, Marcus R.

LOMETS2: improved meta-threading server for fold-recognition and structure-based function annotation for distant-homology proteins

NUCLEIC ACIDS RESEARCH

IF13.1

2019-05-13

114

OAAI

Zheng, Wei; Zhang, Chengxin; Wuyun, Qiqige; Pearce, Robin; Li, Yang; Zhang, Yang

A large-scale comparative assessment of methods for residue-residue contact prediction

BRIEFINGS IN BIOINFORMATICS

IF7.7

2016-11-01

PREAI

Wuyun, Qiqige; Zheng, Wei; Peng, Zhenling; Yang, Jianyi

研究方向