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Pangenome reconstruction in rats enhances genotype-phenotype mapping and variant discovery 大鼠泛基因组重建增强了基因型-表型作图和变异发现 Villani, Flavia; Guarracino, Andrea; Ward, Rachel R.; Green, Tomomi; Emms, Madeleine; Pravenec, Michal; Sharp, Burt; Prins, Pjotr; Garrison, Erik; Chen, Hao; Colonna, Vincenza 分享 收藏
Genetic modulation of protein expression in rat brain 大鼠脑中蛋白质表达的遗传调控 Li, Ling; Wu, Zhiping; Guarracino, Andrea; Villani, Flavia; Kong, Dehui; Mancieri, Ariana; Zhang, Aijun; Saba, Laura; Chen, Hao; Brozka, Hana; Vales, Karel; Senko, Anna N.; Kempermann, Gerd; Stuchlik, Ales; Pravenec, Michal; Lechner, Joseph; Prins, Pjotr; Mathur, Ramkumar; Lu, Lu; Yang, Kai; Williams, Robert W.; Wang, Xusheng 分享 收藏
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing 仅使用纳米孔测序的完整人类和植物染色体的无间隙组装 Koren, Sergey; Bao, Zhigui; Guarracino, Andrea; Ou, Shujun; Goodwin, Sara; Jenike, Katharine M.; Lucas, Julian; Mcnulty, Brandy; Park, Jimin; Rautiainen, Mikko; Rhie, Arang; Roelofs, Dick; Schneiders, Harrie; Vrijenhoek, Ilse; Nijbroek, Koen; Nordesjo, Olle; Nurk, Sergey; Vella, Mike; Lawrence, Katherine R.; Ware, Doreen; Schatz, Michael C.; Garrison, Erik; Huang, Sanwen; Mccombie, William Richard; Miga, Karen H.; Wittenberg, Alexander H. J.; Phillippy, Adam M. 分享 收藏
Building pangenome graphs 构建pangenome图 Garrison, Erik; Guarracino, Andrea; Heumos, Simon; Villani, Flavia; Bao, Zhigui; Tattini, Lorenzo; Hagmann, Joerg; Vorbrugg, Sebastian; Marco-Sola, Santiago; Kubica, Christian; Ashbrook, David G.; Thorell, Kaisa; Rusholme-Pilcher, Rachel L.; Liti, Gianni; Rudbeck, Emilio; Golicz, Agnieszka A.; Nahnsen, Sven; Yang, Zuyu; Mwaniki, Moses Njagi; Nobrega, Franklin L.; Wu, Yi; Chen, Hao; de Ligt, Joep; Sudmant, Peter H.; Huang, Sanwen; Weigel, Detlef; Soranzo, Nicole; Colonna, Vincenza; Williams, Robert W.; Prins, Pjotr 分享 收藏
High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation 对来自1000基因组项目的样品进行高覆盖纳米孔测序，以建立人类遗传变异的综合目录 Gustafson, Jonas A.; Gibson, Sophia B.; Damaraju, Nikhita; Zalusky, Miranda P. G.; Hoekzema, Kendra; Twesigomwe, David; Yang, Lei; Snead, Anthony A.; Richmond, Phillip A.; De Coster, Wouter; Olson, Nathan D.; Guarracino, Andrea; Li, Qiuhui; Miller, Angela L.; Goffena, Joy; Anderson, Zachary B.; Storz, Sophie H. R.; Ward, Sydney A.; Sinha, Maisha; Gonzaga-Jauregui, Claudia; Clarke, Wayne E.; Basile, Anna O.; Corvelo, Andre; Reeves, Catherine; Helland, Adrienne; Musunuri, Rajeeva Lochan; Revsine, Mahler; Patterson, Karynne E.; Paschal, Cate R.; Zakarian, Christina; Goodwin, Sara; Jensen, Tanner D.; Robb, Esther; McCombie, William Richard; Sedlazeck, Fritz J.; Zook, Justin M.; Montgomery, Stephen B.; Garrison, Erik; Kolmogorov, Mikhail; Schatz, Michael C.; McLaughlin Jr, Richard N.; Dashnow, Harriet; Zody, Michael C.; Loose, Matt; Jain, Miten; Eichler, Evan E.; Miller, Danny E. 分享 收藏
Type I IFNs promote cancer cell stemness by triggering the epigenetic regulator KDM1B (vol 23, pg 1379, 2022) I型ifn通过触发表观遗传调节因子KDM1B促进癌细胞干细胞性 (第23卷，1379页，2022页) Musella, Martina; Guarracino, Andrea; Manduca, Nicoletta; Galassi, Claudia; Ruggiero, Eliana; Potenza, Alessia; Maccafeo, Ester; Manic, Gwenola; Mattiello, Luca; Rehim, Sara Soliman Abdel; Signore, Michele; Pietrosanto, Marco; Helmer-Citterich, Manuela; Pallocca, Matteo; Fanciulli, Maurizio; Bruno, Tiziana; De Nicola, Francesca; Corleone, Giacomo; Di Benedetto, Anna; Ercolani, Cristiana; Pescarmona, Edoardo; Pizzuti, Laura; Guidi, Francesco; Sperati, Francesca; Vitale, Sara; Macchia, Daniele; Spada, Massimo; Schiavoni, Giovanna; Mattei, Fabrizio; De Ninno, Adele; Businaro, Luca; Lucarini, Valeria; Bracci, Laura; Arico, Eleonora; Ziccheddu, Giovanna; Facchiano, Francesco; Rossi, Stefania; Sanchez, Massimo; Boe, Alessandra; Biffoni, Mauro; De Maria, Ruggero; Vitale, Ilio; Sistigu, Antonella 分享 收藏
A super-pangenome of the North American wild grape species Cochetel, Noe; Minio, Andrea; Guarracino, Andrea; Garcia, Jadran F.; Figueroa-Balderas, Rosa; Massonnet, Melanie; Kasuga, Takao; Londo, Jason P.; Garrison, Erik; Gaut, Brandon S.; Cantu, Dario 分享 收藏
Pangenome graph construction from genome alignments with Minigraph-Cactus 用minigrap-cactus从基因组比对构建Pangenome图 Hickey, Glenn; Monlong, Jean; Ebler, Jana; Novak, Adam M.; Eizenga, Jordan M.; Gao, Yan; Marschall, Tobias; Li, Heng; Paten, Benedict; Abel, Haley J.; Antonacci-Fulton, Lucinda L.; Asri, Mobin; Baid, Gunjan; Baker, Carl A.; Belyaeva, Anastasiya; Billis, Konstantinos; Bourque, Guillaume; Buonaiuto, Silvia; Carroll, Andrew; Chaisson, Mark J. P.; Chang, Pi-Chuan; Chang, Xian H.; Cheng, Haoyu; Chu, Justin; Cody, Sarah; Colonna, Vincenza; Cook, Daniel E.; Cook-Deegan, Robert M.; Cornejo, Omar E.; Diekhans, Mark; Doerr, Daniel; Ebert, Peter; Ebler, Jana; Eichler, Evan E.; Eizenga, Jordan M.; Fairley, Susan; Fedrigo, Olivier; Felsenfeld, Adam L.; Feng, Xiaowen; Fischer, Christian; Flicek, Paul; Formenti, Giulio; Frankish, Adam; Fulton, Robert S.; Gao, Yan; Garg, Shilpa; Garrison, Erik; Garrison, Nanibaa' A.; Giron, Carlos Garcia; Green, Richard E.; Groza, Cristian; Guarracino, Andrea; Haggerty, Leanne; Hall, Ira M.; Harvey, William T.; Haukness, Marina; Haussler, David; Heumos, Simon; Hickey, Glenn; Hoekzema, Kendra; Hourlier, Thibaut; Howe, Kerstin; Jain, Miten; Jarvis, Erich D.; Ji, Hanlee P.; Kenny, Eimear E.; Koenig, Barbara A.; Kolesnikov, Alexey; Korbel, Jan O.; Kordosky, Jennifer; Koren, Sergey; Lee, HoJoon; Lewis, Alexandra P.; Liao, Wen-Wei; Lu, Shuangjia; Lu, Tsung-Yu; Lucas, Julian K.; Hugo, Magalhaes; Santiago, Marco-Sola; Marijon, Pierre; Markello, Charles; Marschall, Tobias; Martin, Fergal J.; McCartney, Ann; McDaniel, Jennifer; Miga, Karen H.; Mitchell, Matthew W.; Monlong, Jean; Mountcastle, Jacquelyn; Munson, Katherine M.; Mwaniki, Moses Njagi; Nattestad, Maria; Novak, Adam M.; Nurk, Sergey; Olsen, Hugh E.; Olson, Nathan D.; Pesout, Trevor; Phillippy, Adam M.; Popejoy, Alice B.; Porubsky, David; Prins, Pjotr; Puiu, Daniela; Rautiainen, Mikko; Regier, Allison A.; Rhie, Arang; Sacco, Samuel; Sanders, Ashley D.; Schneider, Valerie A.; Schultz, Baergen, I; Shafin, Kishwar; Sibbesen, Jonas A.; Siren, Jouni; Smith, Michael W.; Sofia, Heidi J.; Abou Tayoun, Ahmad N.; Thibaud-Nissen, Francoise; Tomlinson, Chad; Tricomi, Francesca Floriana; Villani, Flavia; Vollger, Mitchell R.; Wagner, Justin; Walenz, Brian; Wang, Ting; Wood, Jonathan M. D.; Zimin, Aleksey, V; Zook, Justin M. 分享 收藏
Type I IFNs promote cancer cell stemness by triggering the epigenetic regulator KDM1B I型ifn通过触发表观遗传调节因子KDM1B促进癌细胞干细胞性 Musella, Martina; Guarracino, Andrea; Manduca, Nicoletta; Galassi, Claudia; Ruggiero, Eliana; Potenza, Alessia; Maccafeo, Ester; Manic, Gwenola; Mattiello, Luca; Rehim, Sara Soliman Abdel; Signore, Michele; Pietrosanto, Marco; Helmer-Citterich, Manuela; Pallocca, Matteo; Fanciulli, Maurizio; Bruno, Tiziana; De Nicola, Francesca; Corleone, Giacomo; Di Benedetto, Anna; Ercolani, Cristiana; Pescarmona, Edoardo; Pizzuti, Laura; Guidi, Francesco; Sperati, Francesca; Vitale, Sara; Macchia, Daniele; Spada, Massimo; Schiavoni, Giovanna; Mattei, Fabrizio; De Ninno, Adele; Businaro, Luca; Lucarini, Valeria; Bracci, Laura; Arico, Eleonora; Ziccheddu, Giovanna; Facchiano, Francesco; Rossi, Stefania; Sanchez, Massimo; Boe, Alessandra; Biffoni, Mauro; De Maria, Ruggero; Vitale, Ilio; Sistigu, Antonella 分享 收藏
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Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis 全基因组生物信息学分析预测SARS-CoV-2发病机制中的关键宿主和病毒因素 Ferrarini, Mariana G.; Lal, Avantika; Rebollo, Rita; Gruber, Andreas J.; Guarracino, Andrea; Gonzalez, Itziar Martinez; Floyd, Taylor; de Oliveira, Daniel Siqueira; Shanklin, Justin; Beausoleil, Ethan; Pusa, Taneli; Pickett, Brett E.; Aguiar-Pulido, Vanessa 分享 收藏
Inhibition of HECT E3 ligases as potential therapy for COVID-19 Novelli, Giuseppe; Liu, Jing; Biancolella, Michela; Alonzi, Tonino; Novelli, Antonio; Patten, J. J.; Cocciadiferro, Dario; Agolini, Emanuele; Colona, Vito Luigi; Rizzacasa, Barbara; Giannini, Rosalinda; Bigio, Benedetta; Goletti, Delia; Capobianchi, Maria Rosaria; Grelli, Sandro; Mann, Justin; McKee, Trevor D.; Cheng, Ke; Amanat, Fatima; Krammer, Florian; Guarracino, Andrea; Pepe, Gerardo; Tomino, Carlo; Tandjaoui-Lambiotte, Yacine; Uzunhan, Yurdagul; Tubiana, Sarah; Ghosn, Jade; Notarangelo, Luigi D.; Su, Helen C.; Abel, Laurent; Cobat, Aurelie; Elhanan, Gai; Grzymski, Joseph J.; Latini, Andrea; Sidhu, Sachdev S.; Jain, Suresh; Davey, Robert A.; Casanova, Jean-Laurent; Wei, Wenyi; Pandolfi, Pier Paolo 分享 收藏
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