Simone Picelli - Publications, H-index & Citations

Simone Picelli

Institute of Molecular and Clinical Ophthalmology Basel

26H指数

83论文数

1.5W被引数

收录论文 25

发表时间

SEQURNA enhances FLASH-seq gene detection while eliminating DTT dependence SEQURNA增强FLASH-seq基因检测同时消除DTT依赖

Scientific Reports

IF3.9

2026-08-29

OAAI

Irina Khven; Mariana M. Ribeiro; Sara Crausaz; Simone Picelli

Cell-type-targeted mitochondrial transplantation rescues cell degeneration 细胞类型靶向线粒体移植挽救细胞退变

Nature

IF48.5

2026-04-15

OAAI

Temurkhan Ayupov; Verónica Moreno-Juan; Serena Curtoni; Alex Fratzl; Upnishad Sharma; Susana Posada-Céspedes; Ramona Ratiu; Rei Morikawa; Alexandra Graff Meyer; Margherita Pezzoli; Glenn Bantug; Morgan Chevalier; Yanyan Hou; Sarah A. Nadeau; Álvaro Herrero-Navarro; Vikram Ayinampudi; Elizabeth Kastanaki; Natasha Whitehead; Rebecca A. Siwicki; Mariana M. Ribeiro; Ji Hoon Han; Annalisa Bucci; Christoph Hess; Simone Picelli; Magdalena Renner; Daniel J. Müller; Cameron S. Cowan; Simon Hansen; Botond Roska

Single-cell profiling reveals diverse γδ T cell subsets in ulcerative colitis 单细胞分析揭示溃疡性结肠炎中不同的 γ δ T细胞亚群

Science Immunology

IF16.3

2026-02-06

PREAI

Lena S. Mayer; Jakob Arnold; Felix Roettele; Nadine Reuter; Ajinkya Pattekar; Takuya Ohtani; Mariana M. Ribeiro; Rebecca Siwicki; Kerstin Bruder; David Obwegs; Elin Stahl; Sarah Buechel; Natascha Roehlen; Julia Kolter; Zohreh Mansoori Moghadam; Ahmed Alaswad; Zhibek Zhumalidova; Guang Li; Xinjuan Liu; Yang Li; Amit Singh; Jose Villacorta Hidalgo; Maria D. Paraskevopoulou; Vijay Yajnik; Julius Juarez; Yue Ren; Hongzhe Li; E. John Wherry; James D. Lewis; Gary D. Wu; Meenakshi Bewtra; Vesselin T. Tomov; Robert Thimme; Bertram Bengsch; Peter Hasselblatt; Simone Picelli; Maike Hofmann; Sagar

Single-cell profiling reveals distinct γδ T cell subsets with protective and pathogenic roles in Ulcerative Colitis

JOURNAL OF CROHNS & COLITIS

IF8.7

2025-01-22

PREAI

Mayer, L. S.; Arnold, J.; Reuter, N.; Pattekar, A.; Ohtani, T.; Bruder, K.; Ribeiro, M.; Siwicki, R.; Obwegs, D.; Stahl, E.; Kolter, J.; Mansoori Moghadam, Z.; Alaswad, A.; Li, Y.; Lewis, J. D.; Wu, G. D.; Bewtra, M.; Tomov, V. T.; Bengsch, B.; Thimme, R.; Hasselblatt, P.; Picelli, S.; Hofmann, M.; Sagar, S.

High-resolution multimodal profiling of human epileptic brain activity via electrodes

JCI INSIGHT

IF6.1

2025-01-09

OAAI

Dwivedi, Anuj Kumar; Mahesh, Arun; Sanfeliu, Albert; Larkin, Julian; Siwicki, Rebecca A.; Sweeney, Kieron J.; O'Brien, Donncha F.; Widdess-Walsh, Peter; Picelli, Simone; Henshall, David C.; Tiwari, Vijay K.

Multimodal spatiotemporal phenotyping of human retinal organoid development

NATURE BIOTECHNOLOGY

IF41.7

2023-05-08

OAAI

Wahle, Philipp; Brancati, Giovanna; Harmel, Christoph; He, Zhisong; Gut, Gabriele; del Castillo, Jacobo Sarabia; dos Santos, Aline Xavier da Silveira; Yu, Qianhui; Noser, Pascal; Fleck, Jonas Simon; Gjeta, Bruno; Pavlinic, Dinko; Picelli, Simone; Hess, Max; Schmidt, Gregor W.; Lummen, Tom T. A.; Hou, Yanyan; Galliker, Patricia; Goldblum, David; Balogh, Marton; Cowan, Cameron S.; Scholl, Hendrik P. N.; Roska, Botond; Renner, Magdalena; Pelkmans, Lucas; Treutlein, Barbara; Camp, J. Gray

Adenoviral-based vaccine promotes neoantigen-specific CD8+ T cell stemness and tumor rejection 基于腺病毒的疫苗促进新抗原特异性CD8 T细胞干细胞和肿瘤排斥

SCIENCE TRANSLATIONAL MEDICINE

IF14.6

2022-08-10

OAAI

D'Alise, Anna Morena; Brasu, Nadia; De Intinis, Carlo; Leoni, Guido; Russo, Valentina; Langone, Francesca; Baev, Denis; Micarelli, Elisa; Petiti, Luca; Picelli, Simone; Fakih, Marwan; Le, Dung T.; Overman, Michael J.; Shields, Anthony F.; Pedersen, Katrina S.; Shah, Manish A.; Mukherjee, Sarbajit; Faivre, Thea; Delaite, Patricia; Scarselli, Elisa; Pace, Luigia

Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq 使用flash-seq进行快速且高度灵敏的全长单细胞RNA测序

NATURE BIOTECHNOLOGY

IF41.7

2022-05-30

OAAI

Hahaut, Vincent; Pavlinic, Dinko; Carbone, Walter; Schuierer, Sven; Balmer, Pierre; Quinodoz, Mathieu; Renner, Magdalena; Roma, Guglielmo; Cowan, Cameron S.; Picelli, Simone

Divergent clonal differentiation trajectories establish CD8+ memory T cell heterogeneity during acute viral infections in humans

CELL REPORTS

IF6.9

2021-05-01

OAAI

Mold, Jeff E.; Modolo, Laurent; Hard, Joanna; Zamboni, Margherita; Larsson, Anton J. M.; Stenudd, Moa; Eriksson, Carl-Johan; Durif, Ghislain; Stahl, Patrik L.; Borgstrom, Erik; Picelli, Simone; Reinius, Bjorn; Sandberg, Rickard; Reu, Pedro; Talavera-Lopez, Carlos; Andersson, Bjorn; Blom, Kim; Sandberg, Johan K.; Picard, Franck; Michaelsson, Jakob; Frisen, Jonas

Single-Cell Transcriptomics Uncovers Zonation of Function in the Mesenchyme during Liver Fibrosis 单细胞转录组学揭示肝纤维化期间间充质功能的分区

CELL REPORTS

IF6.9

2019-11-01

259

OAAI

Dobie, Ross; Wilson-Kanamori, John R.; Henderson, Beth E. P.; Smith, James R.; Matchett, Kylie P.; Portman, Jordan R.; Wallenborg, Karolina; Picelli, Simone; Zagorska, Anna; Pendem, Swetha V.; Hudson, Thomas E.; Wu, Minnie M.; Budas, Grant R.; Breckenridge, David G.; Harrison, Ewen M.; Mole, Damian J.; Wigmore, Stephen J.; Ramachandran, Prakash; Ponting, Chris P.; Teichmann, Sarah A.; Marioni, John C.; Henderson, Neil C.

Tutorial: guidelines for the experimental design of single-cell RNA sequencing studies

NATURE PROTOCOLS

IF16

2018-11-16

148

OAAI

Lafzi, Atefeh; Moutinho, Catia; Picelli, Simone; Heyn, Holger

STRT-seq-2i: dual-index 5′ single cell and nucleus RNA-seq on an addressable microwell array

SCIENTIFIC REPORTS

IF3.9

2017-11-27

OAAI

Hochgerner, Hannah; Lonnerberg, Peter; Hodge, Rebecca; Mikes, Jaromir; Heskol, Abeer; Hubschle, Hermann; Lin, Philip; Picelli, Simone; La Manno, Gioele; Ratz, Michael; Dunne, Jude; Husain, Syed; Lein, Ed; Srinivasan, Maithreyan; Zeisel, Amit; Linnarsson, Sten

Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes 健康和2型糖尿病中人胰岛的单细胞转录组图谱

CELL METABOLISM

IF30.9

2016-10-01

1.1K

OAAI

Segerstolpe, Asa; Palasantza, Athanasia; Eliasson, Pernilla; Andersson, Eva-Marie; Andreasson, Anne-Christine; Sun, Xiaoyan; Picelli, Simone; Sabirsh, Alan; Clausen, Maryam; Bjursell, Magnus K.; Smith, David M.; Kasper, Maria; Ammala, Carina; Sandberg, Rickard

Single-cell RNA-sequencing: The future of genome biology is now

RNA BIOLOGY

IF3.4

2016-07-21

195

OAAI

Picelli, Simone

The heterogeneity of human CD127+ innate lymphoid cells revealed by single-cell RNA sequencing (vol 17, pg 451, 2016)

NATURE IMMUNOLOGY

IF27.6

2016-05-19

OAAI

Bjorklund, Asa K.; Forkel, Marianne; Picelli, Simone; Konya, Viktoria; Theorell, Jakob; Friberg, Danielle; Sandberg, Rickard; Mjosberg, Jenny

The heterogeneity of human CD127+ innate lymphoid cells revealed by single-cell RNA sequencing

NATURE IMMUNOLOGY

IF27.6

2016-02-15

425

PREAI

Bjorklund, Asa K.; Forkel, Marianne; Picelli, Simone; Konya, Viktoria; Theorell, Jakob; Friberg, Danielle; Sandberg, Rickard; Mjosberg, Jenny

Tn5 transposase and tagmentation procedures for massively scaled sequencing projects 大规模测序项目的Tn5转座酶和标签化程序

GENOME RESEARCH

IF5.5

2014-07-30

717

OAAI

Picelli, Simone; Bjorklund, Asa K.; Reinius, Bjorn; Sagasser, Sven; Winberg, Gosta; Sandberg, Rickard

Full-length RNA-seq from single cells using Smart-seq2 使用Smart-seq2从单细胞获得全长rna-seq

NATURE PROTOCOLS

IF16

2014-01-02

3.1K

PREAI

Picelli, Simone; Faridani, Omid R.; Bjorklund, Asa K.; Winberg, Gosta; Sagasser, Sven; Sandberg, Rickard

Smart-seq2 for sensitive full-length transcriptome profiling in single cells 单细胞中敏感的全长转录组分析的Smart-seq2

NATURE METHODS

IF32.1

2013-09-22

1.9K

PREAI

Picelli, Simone; Bjorklund, Asa K.; Faridani, Omid R.; Sagasser, Sven; Winberg, Gosta; Sandberg, Rickard

Association studies on 11 published colorectal cancer risk loci

BRITISH JOURNAL OF CANCER

IF6.8

2010-07-20

OAAI

von Holst, S.; Picelli, S.; Edler, D.; Lenander, C.; Dalen, J.; Hjern, F.; Lundqvist, N.; Lindforss, U.; Pahlman, L.; Smedh, K.; Tornqvist, A.; Holm, J.; Janson, M.; Andersson, M.; Ekelund, S.; Olsson, L.; Ghazi, S.; Papadogiannakis, N.; Tenesa, A.; Farrington, S. M.; Campbell, H.; Dunlop, M. G.; Lindblom, A.

研究方向