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R

Rahmad Akbar

novo nordisk a/s
H指数:18
被引数:1,076

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A blinded, prospective benchmark of in silico antibody discovery anchored to experimental affinity and developability

一项基于实验亲和力与可开发性的模拟抗体发现的盲法前瞻性基准研究

Nature Biotechnology
IF41.7
2026-08-190
OA
M. Frank Erasmus; Daniel Bedinger; Elizabeth Hopkins; Ginger Ferguson; Justine Strickler; Christilyn P. Graff; Samantha R. Summers; Stacy L. Capehart; Joshua D. Slocum; Crystal Richardson; Sumit Kumar; Zhifei Sun; Yujie Shang; Jixian Zhang; Ming Gu; Lixia Yi; Alon Wellner; Shuangjia Zheng; Wei Lu; Pietro Sormanni; Matthew Greenig; Haiping Zhang; Brendan T. Mann; Mahdi Baghbanzadeh; Ali Rahnavard; Gregory L. Moore; Huaiyu Sun; Ying Ding; Alex Nisthal; Jitendra Kanodia; Matthew J. Bernett; Aurélien Pélissier; Yanjun Shao; Maria Rodriguez Martinez; Karthik Ramesh; Horacio Nastri; Andreas Evers; Anhar Abdelatif; Andrew J. Bordner; Mykola Bordyuh; Lim Heo; Brian A. Kidd; H. Serhat Tetikol; Shuai Wei; Jung-Eun Shin; Ryan Peckner; Leigh Manley; Ajitesh Lunge; Yashas Devasurmutt; Bora Guloglu; Liviu Copoiu; Miles McGibbon; Monica L. Fernandez-Quintero; Nitesh Mishra; Sean M. Callaghan; Olivia M. Swanson; Daniel L. V. Bader; James A. Ferguson; Sai S. R. Raghavan; Benjamin Nemoz; Colleen A. Maillie; Charles Bowman; Bryan Briney; Andrew B. Ward; Paolo Marcatili; Rahmad Akbar; Bing He; Fandi Wu; Jianhua Yao; Bin Hu; Michal Kucer; Kaetlyn Rose Gibson; Rahul Somasundaram; Li-Wei Hung; Tomasz Kaszuba; Daved H. Fremont; Hyeongsun Jeong; Vinodh Babu Kurella; Shipra Malhotra; Satyendra Kumar; Yanyun Liu; Lingling Xu; Joshua Misa; Alexander Nicholas St. John; Jeff Vogt; Fátima A. Dávila-Hernández; Da Xu; Michael Chungyoun; Zyaja D. Huggan; Jeffrey J. Gray; Jonathan Parkinson; Young Su Ko; Wei Wang; Franziska Geiger; Jonathon D. Ziegler; Nikhil Haas; Chance Challacombe; Ahmad Qamar; Akshita Singh; Yi-Ching Tang; Zhiqiang An; Xiaoqian Jiang; Yejin Kim; Xinyan Zhao; Erik Swanson; Jürgen Klattig; Karsten Winkler; Tschimegma Bataa; Volker Sandig; Lilian Denzler; Chunan Liu; Randall J. Brezski; Laura Spector; Katheryn Perea-Schmittle; Sara D’Angelo; Fortunato Ferrara; Andrew R. M. Bradbury
AIntibody: an experimentally validated in silico antibody discovery design challenge
NATURE BIOTECHNOLOGY
IF41.7
2024-11-040
OA
Erasmus, M. Frank; Spector, Laura; Ferrara, Fortunato; Diniro, Roberto; Pohl, Thomas J.; Perea-Schmittle, Katheryn; Wang, Wei; Tessier, Peter M.; Richardson, Crystal; Turner, Laure; Kumar, Sumit; Bedinger, Daniel; Sormanni, Pietro; Fernandez-Quintero, Monica L.; Ward, Andrew B.; Loeffler, Johannes R.; Swanson, Olivia M.; Deane, Charlotte M.; Raybould, Matthew I. J.; Evers, Andreas; Sellmann, Carolin; Bachas, Sharrol; Ruffolo, Jeff; Nastri, Horacio G.; Ramesh, Karthik; Sorensen, Jesper; Croasdale-Wood, Rebecca; Hijano, Oliver; Leal-Lopes, Camila; Shahsavarian, Melody; Qiu, Yu; Marcatili, Paolo; Vernet, Erik; Akbar, Rahmad; Friedensohn, Simon; Wagner, Rick; Kurella, Vinodh babu; Malhotra, Shipra; Kumar, Satyendra; Kidger, Patrick; Almagro, Juan C.; Furfine, Eric; Stanton, Marty; Graff, Christilyn P.; Villalba, Santiago David; Tomszak, Florian; Teixeira, Andre A. R.; Hopkins, Elizabeth; Dovner, Molly; D'Angelo, Sara; Bradbury, Andrew R. M.
Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence( vol 14, 1265044, 2023)

人工智能鉴定的免疫原性SARS-CoV-2 T细胞表位的实验验证 (第14卷，1265044，2023)

FRONTIERS IN IMMUNOLOGY
IF5.9
2024-02-210
OAAI
Federico, Lorenzo; Malone, Brandon; Tennoe, Simen; Chaban, Viktoriia; Osen, Julie Rokke; Gainullin, Murat; Smorodina, Eva; Kared, Hassen; Akbar, Rahmad; Greiff, Victor; Stratford, Richard; Clancy, Trevor; Munthe, Ludvig Andre
Unconstrained generation of synthetic antibody-antigen structures to guide machine learning methodology for antibody specificity prediction
NATURE COMPUTATIONAL SCIENCE
IF18.3
2022-12-1920
OA
Robert, Philippe A.; Akbar, Rahmad; Frank, Robert; Pavlovic, Milena; Widrich, Michael; Snapkov, Igor; Slabodkin, Andrei; Chernigovskaya, Maria; Scheffer, Lonneke; Smorodina, Eva; Rawat, Puneet; Mehta, Brij Bhushan; Mai Ha Vu; Mathisen, Ingvild Froberg; Prosz, Aurel; Abram, Krzysztof; Olar, Alex; Miho, Enkelejda; Haug, Dag Trygve Tryslew; Lund-Johansen, Fridtjof; Hochreiter, Sepp; Haff, Ingrid Hobaek; Klambauer, Gunter; Sandve, Geir Kjetil; Greiff, Victor
In silico proof of principle of machine learning-based antibody design at unconstrained scale
MABS
IF7.3
2022-04-0437
OAAI
Akbar, Rahmad; Robert, Philippe A.; Weber, Cedric R.; Widrich, Michael; Frank, Robert; Pavlovic, Milena; Scheffer, Lonneke; Chernigovskaya, Maria; Snapkov, Igor; Slabodkin, Andrei; Mehta, Brij Bhushan; Miho, Enkelejda; Lund-Johansen, Fridtjof; Andersen, Jan Terje; Hochreiter, Sepp; Haff, Ingrid Hobaek; Klambauer, Guenter; Sandve, Geir Kjetil; Greiff, Victor
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires
NATURE MACHINE INTELLIGENCE
IF23.9
2021-11-1639
OA
Pavlovic, Milena; Scheffer, Lonneke; Motwani, Keshav; Kanduri, Chakravarthi; Kompova, Radmila; Vazov, Nikolay; Waagan, Knut; Bernal, Fabian L. M.; Costa, Alexandre Almeida; Corrie, Brian; Akbar, Rahmad; Al Hajj, Ghadi S.; Balaban, Gabriel; Brusko, Todd M.; Chernigovskaya, Maria; Christley, Scott; Cowell, Lindsay G.; Frank, Robert; Grytten, Ivar; Gundersen, Sveinung; Haff, Ingrid Hobaek; Hovig, Eivind; Hsieh, Ping-Han; Klambauer, Gunter; Kuijjer, Marieke L.; Lund-Andersen, Christin; Martini, Antonio; Minotto, Thomas; Pensar, Johan; Rand, Knut; Riccardi, Enrico; Robert, Philippe A.; Rocha, Artur; Slabodkin, Andrei; Snapkov, Igor; Sollid, Ludvig M.; Titov, Dmytro; Weber, Cedric R.; Widrich, Michael; Yaari, Gur; Greiff, Victor; Sandve, Geir Kjetil

研究方向

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V
Victor Greiff
H 指数:39论文数:190被引数:5,022
G
Geir Kjetil Sandve
H 指数:30论文数:180被引数:4,048
P
Philippe A. Robert
H 指数:27论文数:155被引数:4,247
M
Milena Pavlović
H 指数:15论文数:46被引数:847
I
Igor Snapkov
H 指数:15论文数:40被引数:871
M
Maria Chernigovskaya
H 指数:12论文数:38被引数:560
L
Lonneke Scheffer
H 指数:16论文数:37被引数:1,489
E
Eva Smorodina
H 指数:12论文数:30被引数:717
I
Ingrid Hobæk Haff
H 指数:18论文数:66被引数:1,677
F
Fridtjof Lund‐Johansen
H 指数:44论文数:176被引数:8,399