未登录 A Call for Action: Lessons Learned From a Pilot to Share a Complex, Linked COVID-19 Cohort Dataset for Open Science Amid, Clara; van Roode, Martine Y.; Rinck, Gabriele; van Beek, Janko; de Vries, Rory D.; van Nierop, Gijsbert P.; van Gorp, Eric C. M.; Tobian, Frank; Munnink, Bas B. Oude; Sikkema, Reina S.; Jaenisch, Thomas; Cochrane, Guy; Koopmans, Marion P. G. 分享 收藏
Mobilisation and analyses of publicly available SARS- CoV-2 data for pandemic responses 动员和分析公开的传染性非典型肺炎CoV-2大流行应对数据 Rahman, Nadim; O'Cathail, Colman; Zyoud, Ahmad; Sokolov, Alexey; Munnink, Bas Oude; Gruening, Bjoern; Cummins, Carla; Amid, Clara; Nieuwenhuijse, David F.; Visontai, David; Yuan, David Yu; Gupta, Dipayan; Prasad, Divyae K.; Gulyas, Gabor Mate; Rinck, Gabriele; McKinnon, Jasmine; Rajan, Jeena; Knaggs, Jeff; Skiby, Jeffrey Edward; Steger, Jozsef; Szarvas, Judit; Gueye, Khadim; Papp, Krisztian; Hoek, Maarten; Kumar, Manish; Ventouratou, Marianna A.; Bouquieaux, Marie -Catherine; Koliba, Martin; Mansurova, Milena; Haseeb, Muhammad; Worp, Nathalie; Harrison, Peter W.; Leinonen, Rasko; Thorne, Ross; Selvakumar, Sandeep; Hunt, Sarah; Venkataraman, Sundar; Jayathilaka, Suran; Cezard, Timothee; Maier, Wolfgang; Waheed, Zahra; Iqbal, Zamin; Aarestrup, Frank Miller; Csabai, Istvan; Koopmans, Marion; Burdett, Tony; Cochrane, Guy 分享 收藏
Metagenomics-Based Proficiency Test of Smoked Salmon Spiked with a Mock Community 基于宏基因组学的烟熏鲑鱼能力测试 Sala, Claudia; Mordhorst, Hanne; Gruetzke, Josephine; Brinkmann, Annika; Petersen, Thomas N.; Poulsen, Casper; Cotter, Paul D.; Crispie, Fiona; Ellis, Richard J.; Castellani, Gastone; Amid, Clara; Hakhverdyan, Mikhayil; Le Guyader, Soizick; Manfreda, Gerardo; Mossong, Joel; Nitsche, Andreas; Ragimbeau, Catherine; Schaeffer, Julien; Schlundt, Joergen; Tay, Moon Y. F.; Aarestrup, Frank M.; Hendriksen, Rene S.; Pamp, Sunje Johanna; De Cesare, Alessandra 分享 收藏
Accelerating surveillance and research of antimicrobial resistance - an online repository for sharing of antimicrobial susceptibility data associated with whole-genome sequences 加快抗菌素耐药性的监测和研究-一个在线存储库，用于共享与全基因组序列相关的抗菌素敏感性数据 Matamoros, Sebastien; Hendriksen, Rene S.; Pataki, Balint Armin; Pakseresht, Nima; Rossello, Marc; Silvester, Nicole; Amid, Clara; Aarestrup, Frank M.; Koopmans, Marion; Cochrane, Guy; Csabai, Istvan; Lund, Ole; Schultsz, Constance 分享 收藏
The COMPARE Data Hubs Amid, Clara; Pakseresht, Nima; Silvester, Nicole; Jayathilaka, Suran; Lund, Ole; Dynovski, Lukasz D.; Pataki, Balint A.; Visontai, David; Xavier, Basil Britto; Alako, Blaise T. F.; Belka, Ariane; Cisneros, Jose L. B.; Cotten, Matthew; Haringhuizen, George B.; Harrison, Peter W.; Hoper, Dirk; Holt, Sam; Hundahl, Camilla; Hussein, Abdulrahman; Kaas, Rolf S.; Liu, Xin; Leinonen, Rasko; Malhotra-Kumar, Surbhi; Nieuwenhuijse, David F.; Rahman, Nadim; Ribeiro, Carolina dos S.; Skiby, Jeffrey E.; Schmitz, Dennis; Steger, Jozsef; Szalai-Gindl, Janos M.; Thomsen, Martin C. F.; Caccio, Simone M.; Csabai, Istvan; Kroneman, Annelies; Koopmans, Marion; Aarestrup, Frank; Cochrane, Guy 分享 收藏
The European Nucleotide Archive in 2019 Amid, Clara; Alako, Blaise T. F.; Kadhirvelu, Vishnukumar Balavenkataraman; Burdett, Tony; Burgin, Josephine; Fan, Jun; Harrison, Peter W.; Holt, Sam; Hussein, Abdulrahman; Ivanov, Eugene; Jayathilaka, Suran; Kay, Simon; Keane, Thomas; Leinonen, Rasko; Liu, Xin; Martinez-Villacorta, Josue; Milano, Annalisa; Pakseresht, Amir; Rahman, Nadim; Rajan, Jeena; Reddy, Kethi; Richards, Edward; Smirnov, Dmitriy; Sokolov, Alexey; Vijayaraja, Senthilnathan; Cochrane, Guy 分享 收藏
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage 基于城市污水宏基因组分析的全球抗菌素耐药性监测 Hendriksen, Rene S.; Munk, Patrick; Njage, Patrick; van Bunnik, Bram; McNally, Luke; Lukjancenko, Oksana; Roder, Timo; Nieuwenhuijse, David; Pedersen, Susanne Karlsmose; Kjeldgaard, Jette; Kaas, Rolf S.; Clausen, Philip Thomas Lanken Conradsen; Vogt, Josef Korbinian; Leekitcharoenphon, Pimlapas; van de Schans, Milou G. M.; Zuidema, Tina; Husman, Ana Maria de Roda; Rasmussen, Simon; Petersen, Bent; Amid, Clara; Cochrane, Guy; Sicheritz-Ponten, Thomas; Schmitt, Heike; Alvarez, Jorge Raul Matheu; Aidara-Kane, Awa; Pamp, Sunje J.; Lund, Ole; Hald, Tine; Woolhouse, Mark; Koopmans, Marion P.; Vigre, Hakan; Petersen, Thomas Nordahl; Aarestrup, Frank M.; Bego, Artan; Rees, Catherine; Cassar, Susan; Coventry, Kris; Collignon, Peter; Allerberger, Franz; Rahube, Teddie O.; Oliveira, Guilherme; Ivanov, Ivan; Vuthy, Yith; Sopheak, Thet; Yost, Christopher K.; Ke, Changwen; Zheng, Huanying; Li Baisheng; Jiao, Xiaoyang; Donado-Godoy, Pilar; Coulibaly, Kalpy Julien; Jergovic, Matijana; Hrenovic, Jasna; Karpiskova, Renata; Eduardo Villacis, Jose; Legesse, Mengistu; Eguale, Tadesse; Heikinheimo, Annamari; Malania, Lile; Nitsche, Andreas; Brinkmann, Annika; Saba, Courage Kosi Setsoafia; Kocsis, Bela; Solymosi, Norbert; Thorsteinsdottir, Thorunn R.; Hatha, Abdulla Mohamed; Alebouyeh, Masoud; Morris, Dearbhaile; Cormican, Martin; O'Connor, Louise; Moran-Gilad, Jacob; Alba, Patricia; Battisti, Antonio; Shakenova, Zeinegul; Kiiyukia, Ciira; Ng'eno, Eric; Raka, Lul; Avsejenko, Jelena; Berzins, Aivars; Bartkevics, Vadims; Penny, Christian; Rajandas, Heraa; Parimannan, Sivachandran; Haber, Malcolm Vella; Pal, Pushkar; Jeunen, Gert-Jan; Gemmell, Neil; Fashae, Kayode; Holmstad, Rune; Hasan, Rumina; Shakoor, Sadia; Rojas, Maria Luz Zamudio; Wasyl, Dariusz; Bosevska, Golubinka; Kochubovski, Mihail; Radu, Cojocaru; Gassama, Amy; Radosavljevic, Vladimir; Wuertz, Stefan; Zuniga-Montanez, Rogelio; Tay, Moon Y. F.; Gavacova, Dagmar; Pastuchova, Katarina; Truska, Peter; Trkov, Marija; Esterhuyse, Kerneels; Keddy, Karen; Cerda-Cuellar, Marta; Pathirage, Sujatha; Norrgren, Leif; Orn, Stefan; Larsson, D. G. Joakim; Van der Heijden, Tanja; Kumburu, Happiness Houka; Sanneh, Bakary; Bidjada, Pawou; Njanpop-Lafourcade, Berthe-Marie; Nikiema-Pessinaba, Somtinda Christelle; Levent, Belkis; Meschke, John Scott; Beck, Nicola Koren; Chinh Dang Van; Nguyen Do Phuc; Doan Minh Nguyen Tran; Kwenda, Geoffrey; Tabo, Djim-Adjim; Wester, Astrid Louise; Cuadros-Orellana, Sara 分享 收藏
Minimum Information about an Uncultivated Virus Genome (MIUViG) Roux, Simon; Adriaenssens, Evelien M.; Dutilh, Bas E.; Koonin, Eugene V.; Kropinski, Andrew M.; Krupovic, Mart; Kuhn, Jens H.; Lavigne, Rob; Brister, J. Rodney; Varsani, Arvind; Amid, Clara; Aziz, Ramy K.; Bordenstein, Seth R.; Bork, Peer; Breitbart, Mya; Cochrane, Guy R.; Daly, Rebecca A.; Desnues, Christelle; Duhaime, Melissa B.; Emerson, Joanne B.; Enault, Francois; Fuhrman, Jed A.; Hingamp, Pascal; Hugenholtz, Philip; Hurwitz, Bonnie L.; Ivanova, Natalia N.; Labonte, Jessica M.; Lee, Kyung-Bum; Malmstrom, Rex R.; Martinez-Garcia, Manuel; Mizrachi, Ilene Karsch; Ogata, Hiroyuki; Paez-Espino, David; Petit, Marie-Agnes; Putonti, Catherine; Rattei, Thomas; Reyes, Alejandro; Rodriguez-Valera, Francisco; Rosario, Karyna; Schriml, Lynn; Schulz, Frederik; Steward, Grieg F.; Sullivan, Matthew B.; Sunagawa, Shinichi; Suttle, Curtis A.; Temperton, Ben; Tringe, Susannah G.; Thurber, Rebecca Vega; Webster, Nicole S.; Whiteson, Katrine L.; Wilhelm, Steven W.; Wommack, K. Eric; Woyke, Tanja; Wrighton, Kelly C.; Yilmaz, Pelin; Yoshida, Takashi; Young, Mark J.; Yutin, Natalya; Allen, Lisa Zeigler; Kyrpides, Nikos C.; Eloe-Fadrosh, Emiley A. 分享 收藏
The European Nucleotide Archive in 2018 Harrison, Peter W.; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Cleland, Iain; Holt, Sam; Hussein, Abdulrahman; Jayathilaka, Suran; Kay, Simon; Keane, Thomas; Leinonen, Rasko; Liu, Xin; Martinez-Villacorta, Josue; Milano, Annalisa; Pakseresht, Nima; Rajan, Jeena; Reddy, Kethi; Richards, Edward; Rosello, Marc; Silvester, Nicole; Smirnov, Dmitriy; Toribio, Ana-Luisa; Vijayaraja, Senthilnathan; Cochrane, Guy 分享 收藏
The European Nucleotide Archive in 2017 Silvester, Nicole; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Clarke, Laura; Cleland, Iain; Harrison, Peter W.; Jayathilaka, Suran; Kay, Simon; Keane, Thomas; Leinonen, Rasko; Liu, Xin; Martinez-Villacorta, Josu; Menchi, Manuela; Reddy, Kethi; Pakseresht, Nima; Rajan, Jeena; Rossello, Marc; Smirnov, Dmitriy; Toribio, Ana L.; Vaughan, Daniel; Zalunin, Vadim; Cochrane, Guy 分享 收藏
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies Mitchell, Alex L.; Scheremetjew, Maxim; Denise, Hubert; Potter, Simon; Tarkowska, Aleksandra; Qureshi, Matloob; Salazar, Gustavo A.; Pesseat, Sebastien; Boland, Miguel A.; Hunter, Fiona M. I.; ten Hoopen, Petra; Alako, Blaise; Amid, Clara; Wilkinson, Darren J.; Curtis, Thomas P.; Cochrane, Guy; Finn, Robert D. 分享 收藏
European Nucleotide Archive in 2016 Toribio, Ana Luisa; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Clarke, Laura; Cleland, Iain; Fairley, Susan; Gibson, Richard; Goodgame, Neil; ten Hoopen, Petra; Jayathilaka, Suran; Kay, Simon; Leinonen, Rasko; Liu, Xin; Martinez-Villacorta, Josue; Pakseresht, Nima; Rajan, Jeena; Reddy, Kethi; Rosello, Marc; Silvester, Nicole; Smirnov, Dmitriy; Vaughan, Daniel; Zalunin, Vadim; Cochrane, Guy 分享 收藏
Value, but high costs in post-deposition data curation ten Hoopen, Petra; Amid, Clara; Buttigieg, Pier Luigi; Pafilis, Evangelos; Bravakos, Panos; Cerdeno-Tarraga, Ana M.; Gibson, Richard; Kahlke, Tim; Legaki, Aglaia; Murthy, Kada Narayana; Papastefanou, Gabriella; Pereira, Emiliano; Rossello, Marc; Toribio, Ana Luisa; Cochrane, Guy 分享 收藏
Biocuration of functional annotation at the European nucleotide archive Gibson, Richard; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Cleland, Iain; Goodgame, Neil; ten Hoopen, Petra; Jayathilaka, Suran; Kay, Simon; Leinonen, Rasko; Liu, Xin; Pallreddy, Swapna; Pakseresht, Nima; Rajan, Jeena; Rossello, Marc; Silvester, Nicole; Smirnov, Dmitriy; Toribio, Ana Luisa; Vaughan, Daniel; Zalunin, Vadim; Cochrane, Guy 分享 收藏
Content discovery and retrieval services at the European Nucleotide Archive Silvester, Nicole; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Cleland, Iain; Gibson, Richard; Goodgame, Neil; ten Hoopen, Petra; Kay, Simon; Leinonen, Rasko; Li, Weizhong; Liu, Xin; Lopez, Rodrigo; Pakseresht, Nima; Pallreddy, Swapna; Plaister, Sheila; Radhakrishnan, Rajesh; Rossello, Marc; Senf, Alexander; Smirnov, Dmitriy; Toribio, Ana Luisa; Vaughan, Daniel; Zalunin, Vadim; Cochrane, Guy 分享 收藏
Assembly information services in the European Nucleotide Archive Pakseresht, Nima; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ann; Cleland, Iain; Gibson, Richard; Goodgame, Neil; Gur, Tamer; Jang, Mikyung; Kay, Simon; Leinonen, Rasko; Li, Weizhong; Liu, Xin; Lopez, Rodrigo; McWilliam, Hamish; Oisel, Arnaud; Pallreddy, Swapna; Plaister, Sheila; Radhakrishnan, Rajesh; Riviere, Stephane; Rossello, Marc; Senf, Alexander; Silvester, Nicole; Smirnov, Dmitriy; Squizzato, Silvano; ten Hoopen, Petra; Toribio, Ana Luisa; Vaughan, Daniel; Zalunin, Vadim; Cochrane, Guy 分享 收藏
Structural and functional annotation of the porcine immunome 猪免疫组的结构和功能注释 Dawson, Harry D.; Loveland, Jane E.; Pascal, Geraldine; Gilbert, James G. R.; Uenishi, Hirohide; Mann, Katherine M.; Sang, Yongming; Zhang, Jie; Carvalho-Silva, Denise; Hunt, Toby; Hardy, Matthew; Hu, Zhiliang; Zhao, Shu-Hong; Anselmo, Anna; Shinkai, Hiroki; Chen, Celine; Badaoui, Bouabid; Berman, Daniel; Amid, Clara; Kay, Mike; Lloyd, David; Snow, Catherine; Morozumi, Takeya; Cheng, Ryan Pei-Yen; Bystrom, Megan; Kapetanovic, Ronan; Schwartz, John C.; Kataria, Ranjit; Astley, Matthew; Fritz, Eric; Steward, Charles; Thomas, Mark; Wilming, Laurens; Toki, Daisuke; Archibald, Alan L.; Bed'Hom, Bertrand; Beraldi, Dario; Huang, Ting-Hua; Ait-Ali, Tahar; Blecha, Frank; Botti, Sara; Freeman, Tom C.; Giuffra, Elisabetta; Hume, David A.; Lunney, Joan K.; Murtaugh, Michael P.; Reecy, James M.; Harrow, Jennifer L.; Rogel-Gaillard, Claire; Tuggle, Christopher K. 分享 收藏
Facing growth in the European Nucleotide Archive Cochrane, Guy; Alako, Blaise; Amid, Clara; Bower, Lawrence; Cerdeno-Tarraga, Ana; Cleland, Iain; Gibson, Richard; Goodgame, Neil; Jang, Mikyung; Kay, Simon; Leinonen, Rasko; Lin, Xiu; Lopez, Rodrigo; McWilliam, Hamish; Oisel, Arnaud; Pakseresht, Nima; Pallreddy, Swapna; Park, Youngmi; Plaister, Sheila; Radhakrishnan, Rajesh; Riviere, Stephane; Rossello, Marc; Senf, Alexander; Silvester, Nicole; Smirnov, Dmitriy; ten Hoopen, Petra; Toribio, Ana; Vaughan, Daniel; Zalunin, Vadim 分享 收藏
Major submissions tool developments at the European nucleotide archive Amid, Clara; Birney, Ewan; Bower, Lawrence; Cerdeno-Tarraga, Ana; Cheng, Ying; Cleland, Iain; Faruque, Nadeem; Gibson, Richard; Goodgame, Neil; Hunter, Christopher; Jang, Mikyung; Leinonen, Rasko; Liu, Xin; Oisel, Arnaud; Pakseresht, Nima; Plaister, Sheila; Radhakrishnan, Rajesh; Reddy, Kethi; Riviere, Stephane; Rossello, Marc; Senf, Alexander; Smirnov, Dimitriy; Ten Hoopen, Petra; Vaughan, Daniel; Vaughan, Robert; Zalunin, Vadim; Cochrane, Guy 分享 收藏
From identification to validation to gene count Amid, Clara; Frankish, Adam; Havana; Aken, Bronwen; Ezkurdia, Iakes; Kokocinsk, Felix; Gilbert, James; White, Simon; Carninci, Piero; Gingeras, Thomas; Guigo, Roderic; Searle, Steve; Tress, Michael L.; Harrow, Jennifer; Hubbard, Tim 分享 收藏
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