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The COMPARE Data Hubs

delete2019-12-23
delete27
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OA
AI
C
Clara Amid *
N
Nima Pakseresht
N
Nicole Silvester
S
Suran Jayathilaka
O
Ole Lund
L
Lukasz D. Dynovski
B
Bálint Pataki
D
Dávid Visontai
B
Basil Britto Xavier
B
Blaise Alako
A
Ariane Belka
J
Jose Luis Bellod Cisneros
M
Matthew Cotten
G
George B. Haringhuizen
P
Peter W. Harrison
D
Dirk W. Höper
S
Sam Holt
C
Camilla Hundahl
A
Abdulrahman Hussein
R
Rolf Sommer Kaas
刘欣 封面图
刘欣 (Xin Liu)
R
Rasko Leinonen
S
Surbhi Malhotra‐Kumar
D
David F. Nieuwenhuijse
N
Nadim Rahman
C
Carolina dos S. Ribeiro
J
Jeffrey E. Skiby
D
Dennis Schmitz
J
József Stéger
J
János Márk Szalai-Gindl
M
Martin Christen Frølund Thomsen
S
Simone M. Cacciò
I
István Csabai
A
Annelies Kroneman
M
Marion Koopmans
F
Frank M. Aarestrup
G
Guy Cochrane
DOI:10.1093/database/baz136delete
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摘要

摘要

En 中文
Data sharing enables research communities to exchange findings and build upon the knowledge that arises from their discoveries. Areas of public and animal health as well as food safety would benefit from rapid data sharing when it comes to emergencies. However, ethical, regulatory and institutional challenges, as well as lack of suitable platforms which provide an infrastructure for data sharing in structured formats, often lead to data not being shared or at most shared in form of supplementary materials in journal publications. Here, we describe an informatics platform that includes workflows for structured data storage, managing and pre-publication sharing of pathogen sequencing data and its analysis interpretations with relevant stakeholders.
Keyword:
pathogen sequencing data
data sharing platform
data hubs
pathogen portal
FAIR principles
AI总结

AI总结

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期刊

D
Database-The Journal of Biological Databases and Curation
IF:
3.6
论文数:
1.7K
被引数:
6.1K

机构

U
University of Antwerp
学者数:
2.1W
论文数: 1.9W
被引数: 2.6W
F
friedrich loeffler institute
学者数:
2.6K
论文数: 2.2K
被引数: 6
H
HUN-REN Wigner Research Centre for Physics
学者数:
1.9K
论文数: 1.5K
被引数: 0
H
Hungarian Academy of Sciences
学者数:
7.9K
论文数: 5.6K
被引数: 7.5K
European Bioinformatics Institute 封面图
European Bioinformatics Institute
学者数:
1.2K
论文数: 605
被引数: 1.4W
T
technical university of denmark
学者数:
2.6W
论文数: 2.8W
被引数: 37
E
european molecular biology laboratory (embl)
学者数:
8.3K
论文数: 5.1K
被引数: 31
H
hun-ren
学者数:
1.2W
论文数: 9.4K
被引数: 14
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引用论文

引用论文

Providing incentives to share data early in health emergencies: the role of journal editors
errLANCET
IF88.5
err2015-11-01
err30
errOAAI
errWhitty, Christopher J. M.; Mundel, Trevor; Farrar, Jeremy; Heymann, David L.; Davies, Sally C.; Walport, Mark J.
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err分享
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err分享
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Threats to timely sharing of pathogen sequence data
errSCIENCE
IF45.8
err2018-10-26
err30
errOAAI
errRibeiro, Carolina dos S.; Koopmans, Marion P.; Haringhuizen, George B.
err分享
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The European Nucleotide Archive in 2018
err2018-11-05
err72
errOAAI
errHarrison, Peter W.; Alako, Blaise; Amid, Clara; Cerdeno-Tarraga, Ana; Cleland, Iain; Holt, Sam; Hussein, Abdulrahman; Jayathilaka, Suran; Kay, Simon; Keane, Thomas; Leinonen, Rasko; Liu, Xin; Martinez-Villacorta, Josue; Milano, Annalisa; Pakseresht, Nima; Rajan, Jeena; Reddy, Kethi; Richards, Edward; Rosello, Marc; Silvester, Nicole; Smirnov, Dmitriy; Toribio, Ana-Luisa; Vijayaraja, Senthilnathan; Cochrane, Guy
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