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Pengyi Yang

the university of sydney

46H指数
195论文数
7.5K被引数
收录论文 76
发表时间
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Systematic transcriptomic evaluation of blastoid models of early human development早期人类发育拟胚体模型的系统转录组学评估
errCell Systems
IF7.7
err2026-10-02
err0
errOAAI
errSiqu Long; Hani Jieun Kim; Nazmus Salehin; Hao Huang; Xinran Zhang; Raja Jothi; Pengyi Yang
err分享
err收藏
SwitchClass distinguishes baseline- and perturbation-aligned features across intermediate molecular statesSwitchClass区分基线和扰动对齐特征跨越中间分子状态
errCell Reports Methods
IF4.5
err2026-08-12
err0
errOAAI
errDi Xiao; Siqu Long; Pengyi Yang
err分享
err收藏
Computational blueprints for cell fate programming细胞命运编程的计算蓝图
errStem Cell Reports
IF5.1
err2026-05-28
err0
errOAAI
errPengyi Yang
err分享
err收藏
Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids视黄酸驱动人视网膜类器官中的细胞命运决定、成熟和视网膜区域性
errNature Communications
IF15.7
err2026-04-25
err0
errOAAI
errBenjamin Y. Lim; Carissa Chen; Anna Fredericks; Elham Nilli; Santiago Mesa Mora; Megan Weatherstone; To Ha Loi; Peter Newman; Nader Aryamanesh; Hala Zreiqat; Patrick Tam; Pengyi Yang; Anai Gonzalez-Cordero
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Interpretable deep generative ensemble learning for single-cell omics with Hydra可解释的深度生成集成学习用于单细胞组学中的Hydra
errMolecular Systems Biology
IF7.7
err2026-04-11
err0
errOAAI
errManoj M Wagle; Chunlei Liu; Zunpeng Liu; Yongheng Wang; Manolis Kellis; Ellis Patrick; Pengyi Yang
err分享
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Phosphoproteomics of aged insulin-resistant bone identifies P70S6K phosphorylation of AFF4 as a gene-specific transcriptional regulator老年胰岛素抵抗性骨骼的磷酸蛋白质组学鉴定了P70S6K对AFF4的磷酸化作用，作为基因特异性转录调控因子。
errNature Communications
IF15.7
err2025-12-31
err0
errOAAI
errMriga Dutt; Luoping Liao; Hani Jieun Kim; Ronnie Blazev; Audrey Chan; Hitesh Kore; Ayenachew Bezawork-Geleta; Li Dong; Isela Sarahi Rivera; Natalie K. Y. Wee; Jeffrey Molendijk; Julian P. H. Wong; Vanessa R. Haynes; Veronica Uribe; Gordon S. Lynch; Kelly A. Smith; Magdalene K. Montgomery; Matthew J. Watt; Pengyi Yang; Garron T. Dodd; Stephin J. Vervoort; Natalie A. Sims; Benjamin L. Parker
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Histone methyltransferase PRDM9 promotes survival of drug-tolerant persister cells in glioblastoma组蛋白甲基转移酶PRDM9促进胶质母细胞瘤中药物耐受持久性细胞的存活
errNature Communications
IF15.7
err2025-12-15
err0
errOAAI
errGeorge L. Joun; Emma G. Kempe; Brianna Chen; Jayden R. Sterling; Ramzi H. Abbassi; Dana Friess; Matthew Singleton; Chandra Choudhury; Oana C. Marian; W. Daniel du Preez; Ariadna Recasens; Teleri Clark; Tian Y. Du; Jason K. K. Low; Hani Kim; Pengyi Yang; Jasmine Khor; Monira Hoque; Dinesh C. Indurthi; Mani Kuchibhotla; Ranjith Palanisamy; William T. Jorgensen; Andrew P. Montgomery; Jennifer R. Baker; Sarah L. Higginbottom; Eva Tomaskovic-Crook; Jeremy M. Crook; Lipin Loo; Bryan W. Day; G. Gregory Neely; Ernesto Guccione; Terrance G. Johns; Michael Kassiou; Yuchen Feng; Lachlan Harris; Anthony S. Don; Lenka Munoz
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Connecting cilium, stress response, and proteostasis abnormalities inform variant and therapy assessment in RPGRIP1 retinal organoids连接连接纤毛、应激反应和蛋白质稳态异常，为RPGRIP1视网膜类器官的变异和治疗方案评估提供信息
errStem Cell Reports
IF5.1
err2025-11-20
err0
errOAAI
errTo Ha Loi; Anson Cheng; Hani Jieun Kim; Milan Fernando; Benjamin M. Nash; Nader Aryamanesh; John R. Grigg; Pengyi Yang; Anai Gonzalez-Cordero; Robyn V. Jamieson
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BrainSTEM: A single-cell multiresolution fetal brain atlas reveals transcriptomic fidelity of human midbrain culturesBrainSTEM：单细胞多分辨率胎儿脑图谱揭示了人脑中脑培养物的转录组保真度
errScience Advances
IF12.5
err2025-10-31
err0
PREAI
errHilary S. Y. Toh; Lisheng Xu; Carissa Chen; Pengyi Yang; Alfred X. Sun; John F. Ouyang
err分享
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Pinoresinol Diglucoside Alleviates Ovariectomy-induced Osteoporosis by Modulating the “Microbiota–Gut–Bone” Axis松属素二葡萄糖苷通过调节“微生物组-肠道-骨骼”轴缓解卵巢切除诱导的骨质疏松症
errBiochemical and Biophysical Research Communications
IF2.2
err2025-10-25
err0
PREAI
errNing Li; Huan Pei; Miao Luo; Li Deng; Xiaoliang Zhang; Cong Ma; Funeng Wang; Pengyi Yang; Deguang Li; Lvyu Li; Yuan Ma
err分享
err收藏
Multitask benchmarking of single-cell multimodal omics integration methods单细胞多模态组学整合方法的多任务基准测试
errNature Methods
IF32.1
err2025-10-13
err0
errOAAI
errChunlei Liu; Sichang Ding; Hani Jieun Kim; Siqu Long; Di Xiao; Shila Ghazanfar; Pengyi Yang
err分享
err收藏
SpaNorm: spatially-aware normalization for spatial transcriptomics dataSpaNorm：用于空间转录组学数据的空域感知归一化
errGENOME BIOLOGY
IF9.4
err2025-04-29
err0
errOAAI
errSalim, Agus; Bhuva, Dharmesh D.; Chen, Carissa; Tan, Chin Wee; Yang, Pengyi; Davis, Melissa J.; Yang, Jean Y. H.
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Lineage contribution of the mesendoderm progenitors in the gastrulating mouse embryo原肠形成小鼠胚胎中中内胚层祖细胞的谱系贡献
errDevelopmental Cell
IF8.7
err2025-03-24
err0
PREAI
errV. Pragathi Masamsetti; Nazmus Salehin; Hani Jieun Kim; Nicole Santucci; Megan Weatherstone; Riley McMahon; Lee L. Marshall; Hilary Knowles; Jane Sun; Josh B. Studdert; Nader Aryamanesh; Ran Wang; Naihe Jing; Pengyi Yang; Pierre Osteil; Patrick P.L. Tam
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Trans-omic profiling uncovers molecular controls of early human cerebral organoid formation
errCELL REPORTS
IF6.9
err2024-05-01
err0
errOAAI
errChen, Carissa; Lee, Scott; Zyner, Katherine G.; Fernando, Milan; Nemeruck, Victoria; Wong, Emilie; Marshall, Lee L.; Wark, Jesse R.; Aryamanesh, Nader; Tam, Patrick P. L.; Graham, Mark E.; Gonzalez-Cordero, Anai; Yang, Pengyi
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Wnt dose escalation during the exit from pluripotency identifies tranilast as a regulator of cardiac mesoderm
errDEVELOPMENTAL CELL
IF8.7
err2024-03-01
err1
PREAI
errWu, Zhixuan; Shen, Sophie; Mizikovsky, Dalia; Cao, Yuanzhao; Naval-Sanchez, Marina; Tan, Siew Zhuan; Alvarez, Yanina D.; Sun, Yuliangzi; Chen, Xiaoli; Zhao, Qiongyi; Kim, Daniel; Yang, Pengyi; Hill, Timothy A.; Jones, Alun; Fairlie, David P.; Pebay, Alice; Hewitt, Alex W.; Tam, Patrick P. L.; White, Melanie D.; Nefzger, Christian M.; Palpant, Nathan J.
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Evaluating spatially variable gene detection methods for spatial transcriptomics data评估空间转录组学数据的空间可变基因检测方法
errGENOME BIOLOGY
IF9.4
err2024-01-15
err3
errOAAI
errChen, Carissa; Kim, Hani Jieun; Yang, Pengyi
err分享
err收藏
Evaluation of deep learning-based feature selection for single-cell RNA sequencing data analysis
errGENOME BIOLOGY
IF9.4
err2023-11-10
err4
errOAAI
errHuang, Hao; Liu, Chunlei; Wagle, Manoj M.; Yang, Pengyi
err分享
err收藏
SnapKin: a snapshot deep learning ensemble for kinase-substrate prediction from phosphoproteomics data
errgenomics proteomics bioinformatics
IF2.8
err2023-11-06
err0
errOAAI
errXiao, Di; Lin, Michael; Liu, Chunlei; Geddes, Thomas A.; Burchfield, James G.; Parker, Benjamin L.; Humphrey, Sean J.; Yang, Pengyi
err分享
err收藏
Gene regulatory network reconstruction: harnessing the power of single-cell multi-omic data基因调控网络重建: 利用单细胞多组数据的力量
errNPJ SYSTEMS BIOLOGY AND APPLICATIONS
IF3.5
err2023-10-19
err23
errOAAI
errKim, Daniel; Tran, Andy; Kim, Hani Jieun; Lin, Yingxin; Yang, Jean Yee Hwa; Yang, Pengyi
err分享
err收藏
Vascular senescence and leak are features of the early breakdown of the blood-brain barrier in Alzheimer's disease models血管衰老和渗漏是阿尔茨海默病模型血脑屏障早期破坏的特征
errGEROSCIENCE
IF5.4
err2023-10-02
err23
errOAAI
errTing, Ka Ka; Coleman, Paul; Kim, Hani Jieun; Zhao, Yang; Mulangala, Jocelyne; Cheng, Ngan Ching; Li, Wan; Gunatilake, Dilini; Johnstone, Daniel M.; Loo, Lipin; Neely, G. Gregory; Yang, Pengyi; Gotz, Jurgen; Vadas, Mathew A.; Gamble, Jennifer R.
err分享
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研究方向

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合作学者
合作期刊
M
Matthias Mann
H 指数: 250 · 论文数: 1.4K
M
Manolis Kellis
H 指数: 139 · 论文数: 1.1K
D
David E. James
H 指数: 108 · 论文数: 577
T
Terence P. Speed
H 指数: 108 · 论文数: 640
E
Erik A. Richter
H 指数: 107 · 论文数: 660
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