Dmitrii S. Shcherbinin - Publications, H-index & Citations

Dmitrii S. Shcherbinin

itmo university

12H指数

36论文数

869被引数

收录论文 20

发表时间

ITO electrodes for levitodynamics ITO电极用于悬浮动力学

Physica B: Condensed Matter

IF0

2025-11-12

PREAI

D.P. Shcherbinin; S.S. Rudyi; V.V. Rybin; D.V. Bulyga; I.N. Saraeva; A.V. Ivanov

Controllable spatial bifurcation in optomechanical system: Analytical and numerical study 光机械系统中的可控空间分岔：解析与数值研究

Physica D: Nonlinear Phenomena

IF0

2025-11-11

PREAI

Elizaveta Soboleva; Semyon Rudyi; Dmitrii Shcherbinin; Andrei Ivanov

The Universe in the Trap: The Henon-Heiles Astrophysics Model for the Dynamics in Ion Traps with Inhomogeneity 陷阱中的宇宙: 具有不均匀性的离子阱动力学的Henon-Heiles天体物理学模型

INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS

IF2.3

2025-10-01

PREAI

Rudyi, Semyon; Shcherbinin, Dmitrii; Ivanov, Andrei

Light-Induced Heating of Microsized Nematic Volumes 光诱导加热微米尺寸的向列相体积

CRYSTALS

IF2.4

2025-09-19

OAAI

Shcherbinin, Dmitrii; Glukharev, Denis A.; Rudyi, Semyon; Piven, Anastasiia; Orlova, Tetiana; Sliwa, Izabela; Zakharov, Alex

Charged particles in a cup-trap: trapping principles and nonlinear dynamics simulation 杯式陷阱中的带电粒子：捕获原理与非线性行为模拟

PHYSICA SCRIPTA

IF2.6

2025-04-15

PREAI

Rudyi, Semyon; Shcherbinin, Dmitrii; Ivanov, Andrei

Electrodynamic manipulator for commercial fluorescence microscope

MEASUREMENT

IF5.6

2024-08-01

PREAI

Rybin, Vadim; Bogdanov, Kirill; Rudyi, Semyon; Cherevkov, Sergei; Ivanov, Andrei; Shcherbinin, Dmitrii

Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen

NATURE COMPUTATIONAL SCIENCE

IF18.3

2024-07-10

PREAI

Karnaukhov, Vadim K.; Shcherbinin, Dmitrii S.; Chugunov, Anton O.; Chudakov, Dmitriy M.; Efremov, Roman G.; Zvyagin, Ivan V.; Shugay, Mikhail

Fractal Quasi-Coulomb Crystals in Ion Trap with Cantor Dust Electrode Configuration

FRACTAL AND FRACTIONAL

IF3.3

2023-09-15

OAAI

Rudyi, Semyon; Ivanov, Andrei; Shcherbinin, Dmitrii

Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features 具有已知抗原特异性的T细胞受体的大规模基于模板的结构建模揭示了互补特征

FRONTIERS IN IMMUNOLOGY

IF5.9

2023-08-15

OAAI

Shcherbinin, Dmitrii S.; Karnaukhov, Vadim K.; Zvyagin, Ivan V.; Chudakov, Dmitriy M.; Shugay, Mikhail

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes

FRONTIERS IN IMMUNOLOGY

IF5.9

2022-12-20

OAAI

Karnaukhov, Vadim; Paes, Wayne; Woodhouse, Isaac B.; Partridge, Thomas; Nicastri, Annalisa; Brackenridge, Simon; Shcherbinin, Dmitrii; Chudakov, Dmitry M.; Zvyagin, Ivan V.; Ternette, Nicola; Koohy, Hashem; Borrow, Persephone; Shugay, Mikhail

VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2 大流行时代的VDJdb: SARS-CoV-2特异性T细胞受体纲要

NATURE METHODS

IF32.1

2022-08-15

OAAI

Goncharov, Mikhail; Bagaev, Dmitry; Shcherbinin, Dmitrii; Zvyagin, Ivan; Bolotin, Dmitry; Thomas, Paul G.; Minervina, Anastasia A.; Pogorelyy, Mikhail V.; Ladell, Kristin; McLaren, James E.; Price, David A.; Nguyen, Thi H. O.; Rowntree, Louise C.; Clemens, E. Bridie; Kedzierska, Katherine; Dolton, Garry; Rius, Cristina Rafael; Sewell, Andrew; Samir, Jerome; Luciani, Fabio; Zornikova, Ksenia V.; Khmelevskaya, Alexandra A.; Sheetikov, Saveliy A.; Efimov, Grigory A.; Chudakov, Dmitry; Shugay, Mikhail

Evaluating performance of existing computational models in predicting CD8+T cell pathogenic epitopes and cancer neoantigens 评估现有计算模型在预测CD8 T细胞致病表位和癌症新抗原中的性能

BRIEFINGS IN BIOINFORMATICS

IF7.7

2022-04-25

OAAI

Buckley, Paul R.; Lee, Chloe H.; Ma, Ruichong; Woodhouse, Isaac; Woo, Jeongmin; Tsvetkov, Vasily O.; Shcherbinin, Dmitrii S.; Antanaviciute, Agne; Shughay, Mikhail; Rei, Margarida; Simmons, Alison; Koohy, Hashem

SARS-CoV-2 Epitopes Are Recognized by a Public and Diverse Repertoire of Human T Cell Receptors

IMMUNITY

IF26.3

2020-12-01

164

OAAI

Shomuradova, Alina S.; Vagida, Murad S.; Sheetikov, Savely A.; Zornikova, Ksenia, V; Kiryukhin, Dmitry; Titov, Aleksei; Peshkova, Iuliia O.; Khmelevskaya, Alexandra; Dianov, Dmitry, V; Malasheva, Maria; Shmelev, Anton; Serdyuk, Yana; Bagaev, Dmitry, V; Pivnyuk, Anastasia; Shcherbinin, Dmitrii S.; Maleeva, Alexandra, V; Shakirova, Naina T.; Pilunov, Artem; Malko, Dmitry B.; Khamaganova, Ekaterina G.; Biderman, Bella; Ivanov, Alexander; Shugay, Mikhail; Efimov, Grigory A.

The mechanism of a one-substrate transketolase reaction

BIOSCIENCE REPORTS

IF4.7

2020-08-04

OAAI

Solovjeva, Olga N.; Kovina, Marina, V; Zavialova, Maria G.; Zgoda, Victor G.; Shcherbinin, Dmitrii S.; Kochetov, German A.

MHC-II alleles shape the CDR3 repertoires of conventional and regulatory naive CD4+ T cells Mhc-ii等位基因塑造了常规和调节性幼稚CD4 T细胞的CDR3库

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-06-01

OAAI

Logunova, Nadezhda N.; Kriukova, Valeriia V.; Shelyakin, Pavel V.; Egorov, Evgeny S.; Pereverzeva, Alina; Bozhanova, Nina G.; Shugay, Mikhail; Shcherbinin, Dmitrii S.; Pogorelyy, Mikhail V.; Merzlyak, Ekaterina M.; Zubov, Vasiliy N.; Meiler, Jens; Chudakov, Dmitriy M.; Apt, Alexander S.; Britanova, Olga V.

Memory of Divisional History Directs the Continuous Process of Primitive Hematopoietic Lineage Commitment

STEM CELL REPORTS

IF5.1

2020-04-01

OAAI

Bernitz, Jeffrey M.; Rapp, Katrina; Daniel, Michael G.; Shcherbinin, Dmitrii; Yuan, Ye; Gomes, Andreia; Waghray, Avinash; Brosh, Ran; Lachmann, Alexander; Ma'ayan, Avi; Papatsenko, Dmitri; Moore, Kateri A.

Hybrid nanostructures of plasmonic gold nanoparticles with a-C:H thin films

APPLIED SURFACE SCIENCE

IF6.9

2019-03-01

PREAI

Konshina, E. A.; Shcherbinin, D. P.; Abboud, M. M.; Bogdanov, K., V; Gladskikh, I. A.; Polischuk, V. A.

Comparison of the properties of nematic liquid crystals doped with TiO2 and CdSe/ZnS nanoparticles

JOURNAL OF MOLECULAR LIQUIDS

IF5.2

2018-10-01

PREAI

Konshina, Elena; Shcherbinin, Dmitrii; Kurochkina, Margarita

Stability of the PHF10 subunit of PBAF signature module is regulated by phosphorylation: role of β-TrCP

SCIENTIFIC REPORTS

IF3.9

2017-07-17

OAAI

Tatarskiy, Victor V.; Simonov, Yuriy P.; Shcherbinin, Dmitrii S.; Brechalov, Alexander V.; Georgieva, Sofia G.; Soshnikova, Nataliya V.

Computer-aided design of aptamers for cytochrome p450

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2015-08-01

PREAI

Shcherbinin, Dmitrii S.; Gnedenko, Oksana V.; Khmeleva, Svetlana A.; Usanov, Sergey A.; Gilep, Andrei A.; Yantsevich, Aliaksei V.; Shkel, Tatsiana V.; Yushkevich, Ivan V.; Radko, Sergey P.; Ivanov, Alexis S.; Veselovsky, Alexander V.; Archakov, Alexander I.

研究方向