Aaron P. Ragsdale - Publications, H-index & Citations

Aaron P. Ragsdale

University of Wisconsin-Madison

23H指数

79论文数

2.3K被引数

收录论文 27

发表时间

Genetic Basis of Social Structure in the Pastoral Nomads of Central Eurasia 中亚游牧民族社会结构的遗传基础

Genome Biology and Evolution

IF2.8

2026-10-03

OAAI

Ayken Askapuli; Miguel G Vilar; Maxat Zhabagin; Zhaxylyk Sabitov; Zhaxybay Zhumadilov; Aaron Ragsdale; Theodore G Schurr; John Hawks; Naruya Saitou; null

Mean fitness is maximized in small populations under stabilizing selection on highly polygenic traits 在高度多基因性状的稳定选择下，小群体的平均适应度达到最大

Genetics

IF5.1

2026-09-19

PREAI

Aaron P Ragsdale; null

A model for background selection in nonequilibrium populations 非平衡种群中的背景选择模型

Genetics

IF5.1

2026-05-01

PREAI

Barroso, Gustavo, V; Ragsdale, Aaron P.

GHIST 2024: The First Genomic History Inference Strategies Tournament GHIST 2024：首届基因组历史推断策略锦标赛

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2025-11-01

PREAI

Struck, Travis J.; Vaughn, Andrew H.; Daigle, Austin; Ray, Dylan D.; Noskova, Ekaterina; Sequeira, Jaison J.; Antonets, Svetlana; Alekseevskaya, Elizaveta; Grigoreva, Elizaveta; Raines, Evgenii; Mcmaster, Eilish S.; Kovacs, Toby G. L.; Ragsdale, Aaron P.; Moreno-Estrada, Andres; Lotterhos, Katie E.; Siepel, Adam; Gutenkunst, Ryan N.

Accessible, Realistic Genome Simulation with Selection Using stdpopsim 使用stdpopsim实现的具有可访问性、现实性的选择基因组模拟

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2025-11-01

OAAI

Gower, Graham; Pope, Nathaniel S.; Rodrigues, Murillo F.; Tittes, Silas; Tran, Linh N.; Alam, Ornob; Cavassim, Maria Izabel A.; Fields, Peter D.; Haller, Benjamin C.; Huang, Xin; Jeffrey, Ben; Korfmann, Kevin; Kyriazis, Christopher C.; Min, Jiseon; Rebollo, Ines; Rehmann, Clara T.; Small, Scott T.; Smith, Chris C. R.; Tsambos, Georgia; Wong, Yan; Zhang, Yu; Huber, Christian D.; Gorjanc, Gregor; Ragsdale, Aaron P.; Gronau, Ilan; Gutenkunst, Ryan N.; Kelleher, Jerome; Lohmueller, Kirk E.; Schrider, Daniel R.; Ralph, Peter L.; Kern, Andrew D.

Archaic introgression and the distribution of shared variation under stabilizing selection 古基因渗入及稳定选择下共享变异的分布

PLOS GENETICS

IF3.7

2025-03-31

OAAI

Ragsdale, Aaron P.

A path integral approach for allele frequency dynamics under polygenic selection

GENETICS

IF5.1

2024-11-12

OAAI

Anderson, Nathan W.; Kirk, Lloyd; Schraiber, Joshua G.; Ragsdale, Aaron P.

Human evolution: Neanderthal footprints in African genomes

CURRENT BIOLOGY

IF7.5

2023-11-01

OAAI

Ragsdale, Aaron P.

Demographic modeling of admixed Latin American populations from whole genomes

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2023-10-01

OAAI

Medina-Munoz, Santiago G.; Ortega-Del Vecchyo, Diego; Cruz-Hervert, Luis Pablo; Ferreyra-Reyes, Leticia; Garcia-Garcia, Lourdes; Moreno-Estrada, Andres; Ragsdale, Aaron P.

The genomic footprint of whaling and isolation in fin whale populations

NATURE COMMUNICATIONS

IF15.7

2023-09-12

OAAI

Nigenda-Morales, Sergio F.; Lin, Meixi; Nunez-Valencia, Paulina G.; Kyriazis, Christopher C.; Beichman, Annabel C.; Robinson, Jacqueline A.; Ragsdale, Aaron P.; Urban, R. Jorge; Archer, Frederick I.; Viloria-Gomora, Lorena; Perez-Alvarez, Maria Jose; Poulin, Elie; Lohmueller, Kirk E.; Moreno-Estrada, Andres; Wayne, Robert K.

Multiple Sources of Uncertainty Confound Inference of Historical Human Generation Times

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2023-07-14

OAAI

Ragsdale, Aaron P.; Thornton, Kevin R.

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

ELIFE

IF0

2023-06-21

OAAI

Lauterbur, M. Elise; Cavassim, Maria Izabel A.; Gladstein, Ariella L.; Gower, Graham; Pope, Nathaniel S.; Tsambos, Georgia; Adrion, Jeffrey; Belsare, Saurabh; Biddanda, Arjun; Caudill, Victoria; Cury, Jean; Echevarria, Ignacio; Haller, Benjamin C.; Hasan, Ahmed R.; Huang, Xin; Iasi, Leonardo Nicola Martin; Noskova, Ekaterina; Obsteter, Jana; Pavinato, Vitor Antonio Correa; Pearson, Alice; Peede, David; Perez, Manolo F.; Rodrigues, Murillo F.; Smith, Chris C. R.; Spence, Jeffrey P.; Teterina, Anastasia; Tittes, Silas; Unneberg, Per; Vazquez, Juan Manuel; Waples, Ryan K.; Wohns, Anthony Wilder; Wong, Yan; Baumdicker, Franz; Cartwright, Reed A.; Gorjanc, Gregor; Gutenkunst, Ryan N.; Kelleher, Jerome; Kern, Andrew D.; Ragsdale, Aaron P.; Ralph, Peter L.; Schrider, Daniel R.; Gronau, Ilan

Demes: a standard format for demographic models Demes: 人口统计模型的标准格式

GENETICS

IF5.1

2022-09-29

OAAI

Gower, Graham; Ragsdale, Aaron P.; Bisschop, Gertjan; Gutenkunst, Ryan N.; Hartfield, Matthew; Noskova, Ekaterina; Schiffels, Stephan; Struck, Travis J.; Kelleher, Jerome; Thornton, Kevin R.

Local fitness and epistatic effects lead to distinct patterns of linkage disequilibrium in protein-coding genes

GENETICS

IF5.1

2022-07-14

OAAI

Ragsdale, Aaron P.

Efficient ancestry and mutation simulation with msprime 1.0 使用msprime 1.0进行高效的祖先和突变模拟

GENETICS

IF5.1

2021-12-13

150

OAAI

Baumdicker, Franz; Bisschop, Gertjan; Goldstein, Daniel; Gower, Graham; Ragsdale, Aaron P.; Tsambos, Georgia; Zhu, Sha; Eldon, Bjarki; Ellerman, E. Castedo; Galloway, Jared G.; Gladstein, Ariella L.; Gorjanc, Gregor; Guo, Bing; Jeffery, Ben; Kretzschumar, Warren W.; Lohse, Konrad; Matschiner, Michael; Nelson, Dominic; Pope, Nathaniel S.; Quinto-Cortes, Consuelo D.; Rodrigues, Murillo F.; Saunack, Kumar; Sellinger, Thibaut; Thornton, Kevin; van Kemenade, Hugo; Wohns, Anthony W.; Wong, Yan; Gravel, Simon; Kern, Andrew D.; Koskela, Jere; Ralph, Peter L.; Kelleher, Jerome

Inferring Genome-Wide Correlations of Mutation Fitness Effects between Populations 推断种群之间突变适应性效应的全基因组相关性

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2021-05-27

OAAI

Huang, Xin; Fortier, Alyssa Lyn; Coffman, Alec J.; Struck, Travis J.; Irby, Megan N.; James, Jennifer E.; Leon-Burguete, Jose E.; Ragsdale, Aaron P.; Gutenkunst, Ryan N.

Nonparametric coalescent inference of mutation spectrum history and demography

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2021-05-20

OAAI

DeWitt, William S.; Harris, Kameron Decker; Ragsdale, Aaron P.; Harris, Kelley

Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2021-04-30

OAAI

McAlvay, Alex C.; Ragsdale, Aaron P.; Mabry, Makenzie E.; Qi, Xinshuai; Bird, Kevin A.; Velasco, Pablo; An, Hong; Pires, J. Chris; Emshwiller, Eve

Lessons Learned from Bugs in Models of Human History

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2020-10-01

OAAI

Ragsdale, Aaron P.; Nelson, Dominic; Gravel, Simon; Kelleher, Jerome

A community-maintained standard library of population genetic models

ELIFE

IF0

2020-06-23

OAAI

Adrion, Jeffrey R.; Cole, Christopher B.; Dukler, Noah; Galloway, Jared G.; Gladstein, Ariella L.; Gower, Graham; Kyriazis, Christopher C.; Ragsdale, Aaron P.; Tsambos, Georgia; Baumdicker, Franz; Carlson, Jedidiah; Cartwright, Reed A.; Durvasula, Arun; Gronau, Ilan; Kim, Bernard Y.; McKenzie, Patrick; Messer, Philipp W.; Noskova, Ekaterina; Ortega-Del Vecchyo, Diego; Racimo, Fernando; Struck, Travis J.; Gravel, Simon; Gutenkunst, Ryan N.; Lohmueller, Kirk E.; Ralph, Peter L.; Schrider, Daniel R.; Siepel, Adam; Kelleher, Jerome; Kern, Andrew D.

研究方向