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A multi-study analysis enables identification of potential microbial features associated with skin aging signs Myers, Tyler; Bouslimani, Amina; Huang, Shi; Hansen, Shalisa T.; Clavaud, Cecile; Azouaoui, Anissa; Ott, Alban; Gueniche, Audrey; Bouez, Charbel; Zheng, Qian; Aguilar, Luc; Knight, Rob; Moreau, Magali; Song, Se Jin 分享 收藏
Advances in Microbiome-Derived Solutions and Methodologies Are Founding a New Era in Skin Health and Care Gueniche, Audrey; Perin, Olivier; Bouslimani, Amina; Landemaine, Leslie; Misra, Namita; Cupferman, Sylvie; Aguilar, Luc; Clavaud, Cecile; Chopra, Tarun; Khodr, Ahmad 分享 收藏
Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery (vol 12, 3225, 2021) Behsaz, Bahar; Bode, Edna; Gurevich, Alexey; Shi, Yan-Ni; Grundmann, Florian; Acharya, Deepa; Caraballo-Rodriguez, Andres Mauricio; Bouslimani, Amina; Panitchpakdi, Morgan; Linck, Annabell; Guan, Changhui; Oh, Julia; Dorrestein, Pieter C.; Bode, Helge B.; Pevzner, Pavel A.; Mohimani, Hosein 分享 收藏
Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery 整合基因组学和代谢组学以发现可扩展的非核糖体肽 Behsaz, Bahar; Bode, Edna; Gurevich, Alexey; Shi, Yan-Ni; Grundmann, Florian; Acharya, Deepa; Caraballo-Rodriguez, Andres Mauricio; Bouslimani, Amina; Panitchpakdi, Morgan; Linck, Annabell; Guan, Changhui; Oh, Julia; Dorrestein, Pieter C.; Bode, Helge B.; Pevzner, Pavel A.; Mohimani, Hosein 分享 收藏
Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data Aksenov, Alexander A.; Laponogov, Ivan; Zhang, Zheng; Doran, Sophie L. F.; Belluomo, Ilaria; Veselkov, Dennis; Bittremieux, Wout; Nothias, Louis Felix; Nothias-Esposito, Melissa; Maloney, Katherine N.; Misra, Biswapriya B.; Melnik, Alexey V.; Smirnov, Aleksandr; Du, Xiuxia; Jones, Kenneth L., II; Dorrestein, Kathleen; Panitchpakdi, Morgan; Ernst, Madeleine; van der Hooft, Justin J. J.; Gonzalez, Mabel; Carazzone, Chiara; Amezquita, Adolfo; Callewaert, Chris; Morton, James T.; Quinn, Robert A.; Bouslimani, Amina; Orio, Andrea Albarracin; Petras, Daniel; Smania, Andrea M.; Couvillion, Sneha P.; Burnet, Meagan C.; Nicora, Carrie D.; Zink, Erika; Metz, Thomas O.; Artaev, Viatcheslav; Humston-Fulmer, Elizabeth; Gregor, Rachel; Meijler, Michael M.; Mizrahi, Itzhak; Eyal, Stav; Anderson, Brooke; Dutton, Rachel; Lugan, Raphael; Le Boulch, Pauline; Guitton, Yann; Prevost, Stephanie; Poirier, Audrey; Dervilly, Gaud; Le Bizec, Bruno; Fait, Aaron; Persi, Noga Sikron; Song, Chao; Gashu, Kelem; Coras, Roxana; Guma, Monica; Manasson, Julia; Scher, Jose U.; Barupal, Dinesh Kumar; Alseekh, Saleh; Fernie, Alisdair R.; Mirnezami, Reza; Vasiliou, Vasilis; Schmid, Robin; Borisov, Roman S.; Kulikova, Larisa N.; Knight, Rob; Wang, Mingxun; Hanna, George B.; Dorrestein, Pieter C.; Veselkov, Kirill 分享 收藏
ReDU: a framework to find and reanalyze public mass spectrometry data Jarmusch, Alan K.; Wang, Mingxun; Aceves, Christine M.; Advani, Rohit S.; Aguirre, Shaden; Aksenov, Alexander A.; Aleti, Gajender; Aron, Allegra T.; Bauermeister, Anelize; Bolleddu, Sanjana; Bouslimani, Amina; Rodriguez, Andres Mauricio Caraballo; Chaar, Rama; Coras, Roxana; Elijah, Emmanuel O.; Ernst, Madeleine; Gauglitz, Julia M.; Gentry, Emily C.; Husband, Makhai; Jarmusch, Scott A.; Jones, Kenneth L., II; Kamenik, Zdenek; Le Gouellec, Audrey; Lu, Aileen; Mccall, Laura-Isobel; McPhail, Kerry L.; Meehan, Michael J.; Melnik, Alexey, V; Menezes, Riya C.; Giraldo, Yessica Alejandra Montoya; Nguyen, Ngoc Hung; Nothias, Louis Felix; Nothias-Esposito, Melissa; Panitchpakdi, Morgan; Petras, Daniel; Quinn, Robert A.; Sikora, Nicole; van der Hooft, Justin J. J.; Vargas, Fernando; Vrbanac, Alison; Weldon, Kelly C.; Knight, Rob; Bandeira, Nuno; Dorrestein, Pieter C. 分享 收藏
Reproducible molecular networking of untargeted mass spectrometry data using GNPS 使用gnp的非靶向质谱数据的可再现分子网络 Aron, Allegra T.; Gentry, Emily C.; McPhail, Kerry L.; Nothias, Louis-Felix; Nothias-Esposito, Melissa; Bouslimani, Amina; Petras, Daniel; Gauglitz, Julia M.; Sikora, Nicole; Vargas, Fernando; van Der Hooft, Justin J. J.; Ernst, Madeleine; Bin Kang, Kyo; Aceves, Christine M.; Caraballo-Rodriguez, Andres Mauricio; Koester, Irina; Weldon, Kelly C.; Bertrand, Samuel; Roullier, Catherine; Sun, Kunyang; Tehan, Richard M.; Boya P, Cristopher A.; Christian, Martin H.; Gutierrez, Marcelino; Ulloa, Aldo Moreno; Mora, Javier Andres Tejeda; Mojica-Flores, Randy; Lakey-Beitia, Johant; Vasquez-Chaves, Victor; Zhang, Yilue; Calderon, Angela, I; Tayler, Nicole; Keyzers, Robert A.; Tugizimana, Fidele; Ndlovu, Nombuso; Aksenov, Alexander A.; Jarmusch, Alan K.; Schmid, Robin; Truman, Andrew W.; Bandeira, Nuno; Wang, Mingxun; Dorrestein, Pieter C. 分享 收藏
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages Gauglitz, Julia M.; Aceves, Christine M.; Aksenov, Alexander A.; Aleti, Gajender; Almaliti, Jehad; Bouslimani, Amina; Brown, Elizabeth A.; Campeau, Anaamika; Caraballo-Rodriguez, Andres Mauricio; Chaar, Rama; da Silva, Ricardo R.; Demko, Alyssa M.; Di Ottavio, Francesca; Elijah, Emmanuel; Ernst, Madeleine; Ferguson, L. Paige; Holmes, Xavier; Jarmusch, Alan K.; Jiang, Lingjing; Kang, Kyo Bin; Koester, Irina; Kwan, Brian; Li, Jie; Li, Yueying; Melnik, Alexey, V; Molina-Santiago, Carlos; Ni, Bohan; Oom, Aaron L.; Panitchpakdi, Morgan W.; Petras, Daniel; Quinn, Robert; Sikora, Nicole; Spengler, Katharina; Teke, Bahar; Tripathi, Anupriya; Ul-Hasan, Sabah; van Der Hooft, Justin J. J.; Vargas, Fernando; Vrbanac, Alison; Vu, Anthony Q.; Wang, Steven C.; Weldon, Kelly; Wilson, Kayla; Wozniak, Jacob M.; Yoon, Michael; Bandeira, Nuno; Dorrestein, Pieter C. 分享 收藏
Mass spectrometry searches using MASST Wang, Mingxun; Jarmusch, Alan K.; Vargas, Fernando; Aksenov, Alexander A.; Gauglitz, Julia M.; Weldon, Kelly; Petras, Daniel; da Silva, Ricardo; Quinn, Robert; Melnik, Alexey V.; van der Hooft, Justin J. J.; Caraballo-Rodriguez, Andres Mauricio; Nothias, Louis Felix; Aceves, Christine M.; Panitchpakdi, Morgan; Brown, Elizabeth; Di Ottavio, Francesca; Sikora, Nicole; Elijah, Emmanuel O.; Labarta-Bajo, Lara; Gentry, Emily C.; Shalapour, Shabnam; Kyle, Kathleen E.; Puckett, Sara P.; Watrous, Jeramie D.; Carpenter, Carolina S.; Bouslimani, Amina; Ernst, Madeleine; Swafford, Austin D.; Zuniga, Elina I.; Balunas, Marcy J.; Klassen, Jonathan L.; Loomba, Rohit; Knight, Rob; Bandeira, Nuno; Dorrestein, Pieter C. 分享 收藏
MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities Cao, Liu; Gurevich, Alexey; Alexander, Kelsey L.; Naman, C. Benjamin; Leao, Tiago; Glukhov, Evgenia; Luzzatto-Knaan, Tal; Vargas, Fernando; Quinn, Robby; Bouslimani, Amina; Nothias, Louis Felix; Singh, Nitin K.; Sanders, Jon G.; Benitez, Rodolfo A. S.; Thompson, Luke R.; Hamid, Md-Nafiz; Morton, James T.; Mikheenko, Alla; Shlemov, Alexander; Korobeynikov, Anton; Friedberg, Iddo; Knight, Rob; Venkateswaran, Kasthuri; Gerwick, William H.; Gerwick, Lena; Dorrestein, Pieter C.; Pevzner, Pavel A.; Mohimani, Hosein 分享 收藏
Molecular and Microbial Microenvironments in Chronically Diseased Lungs Associated with Cystic Fibrosis 与囊性纤维化相关的慢性病肺中的分子和微生物微环境 Melnik, Alexey V.; Vazquez-Baeza, Yoshiki; Aksenov, Alexander A.; Hyde, Embriette; McAvoy, Andrew C.; Wang, Mingxun; da Silva, Ricardo R.; Protsyuk, Ivan; Wu, Jason V.; Bouslimani, Amina; Lim, Yan Wei; Luzzatto-Knaan, Tal; Comstock, William; Quinn, Robert A.; Wong, Richard; Humphrey, Greg; Ackermann, Gail; Spivey, Timothy; Brouha, Sharon S.; Bandeira, Nuno; Lin, Grace Y.; Rohwer, Forest; Conrad, Douglas J.; Alexandrov, Theodore; Knight, Rob; Dorrestein, Pieter C.; Garg, Neha 分享 收藏
Initial Development toward Non-Invasive Drug Monitoring via Untargeted Mass Spectrometric Analysis of Human Skin Jarmusch, Alan K.; Elijah, Emmanuel O.; Vargas, Fernando; Bouslimani, Amina; da Silva, Ricardo R.; Ernst, Madeleine; Wang, Mingxun; del Rosario, Krizia K.; Dorrestein, Pieter C.; Tsunoda, Shirley M. 分享 收藏
Are microbiome studies ready for hypothesis-driven research? Tripathi, Anupriya; Marotz, Clarisse; Gonzalez, Antonio; Vazquez-Baeza, Yoshiki; Song, Se Jin; Bouslimani, Amina; McDonald, Daniel; Zhu, Qiyun; Sanders, Jon G.; Smarr, Larry; Dorrestein, Pieter C.; Knight, Rob 分享 收藏
Creating a 3D microbial and chemical snapshot of a human habitat Kapono, Clifford A.; Morton, James T.; Bouslimani, Amina; Melnik, Alexey V.; Orlinsky, Kayla; Knaan, Tal Luzzatto; Garg, Neha; Vazquez-Baeza, Yoshiki; Protsyuk, Ivan; Janssen, Stefan; Zhu, Qiyun; Alexandrov, Theodore; Smarr, Larry; Knight, Rob; Dorrestein, Pieter C. 分享 收藏
3D molecular cartography using LC-MS facilitated by Optimus and 'ili software Protsyuk, Ivan; Melnik, Alexey V.; Nothias, Louis-Felix; Rappez, Luca; Phapale, Prasad; Aksenov, Alexander A.; Bouslimani, Amina; Ryazanov, Sergey; Dorrestein, Pieter C.; Alexandrov, Theodore 分享 收藏
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Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples Melnik, Alexey V.; da Silva, Ricardo R.; Hyde, Embriette R.; Aksenov, Alexander A.; Vargas, Fernando; Bouslimani, Amina; Protsyuk, Ivan; Jarmusch, Alan K.; Tripathi, Anupriya; Alexandrov, Theodore; Knight, Rob; Dorrestein, Pieter C. 分享 收藏
Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis Nakatsuji, Teruaki; Chen, Tiffany H.; Narala, Saisindhu; Chun, Kimberly A.; Two, Aimee M.; Yun, Tong; Shafiq, Faiza; Kotol, Paul F.; Bouslimani, Amina; Melnik, Alexey V.; Latif, Haythem; Kim, Ji-Nu; Lockhart, Alexandre; Artis, Keli; David, Gloria; Taylor, Patricia; Streib, Joanne; Dorrestein, Pieter C.; Grier, Alex; Gill, Steven R.; Zengler, Karsten; Hata, Tissa R.; Leung, Donald Y. M.; Gallo, Richard L. 分享 收藏
Lifestyle chemistries from phones for individual profiling Bouslimani, Amina; Melnik, Alexey V.; Xu, Zhenjiang; Amir, Amnon; da Silva, Ricardo R.; Wang, Mingxun; Bandeira, Nuno; Alexandrov, Theodore; Knight, Rob; Dorrestein, Pieter C. 分享 收藏
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