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Packaging and containerization of computational methods 计算方法的包装和集装箱化 Alser, Mohammed; Lawlor, Brendan; Abdill, Richard J.; Waymost, Sharon; Ayyala, Ram; Rajkumar, Neha; LaPierre, Nathan; Brito, Jaqueline; Ribeiro-dos-Santos, Andre M.; Almadhoun, Nour; Sarwal, Varuni; Firtina, Can; Osinski, Tomasz; Eskin, Eleazar; Hu, Qiyang; Strong, Derek; Kim, Byoung-Do (B. D); Abedalthagafi, Malak S.; Mutlu, Onur; Mangul, Serghei 分享 收藏
Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in a panel of inbred and recombinant inbred mice Khan, Arshad H.; Bagley, Jared R.; LaPierre, Nathan; Gonzalez-Figueroa, Carlos; Spencer, Tadeo C.; Choudhury, Mudra; Xiao, Xinshu; Eskin, Eleazar; Jentsch, James D.; Smith, Desmond J. 分享 收藏
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Ensemble neural network model for detecting thyroid eye disease using external photographs Karlin, Justin; Gai, Lisa; LaPierre, Nathan; Danesh, Kayla; Farajzadeh, Justin; Palileo, Bea; Taraszka, Kodi; Zheng, Jie; Wang, Wei; Eskin, Eleazar; Rootman, Daniel 分享 收藏
A comprehensive benchmarking of WGS-based deletion structural variant callers Sarwal, Varuni; Niehus, Sebastian; Ayyala, Ram; Kim, Minyoung; Sarkar, Aditya; Chang, Sei; Lu, Angela; Rajkumar, Neha; Darfci-Maher, Nicholas; Littman, Russell; Chhugani, Karishma; Soylev, Arda; Comarova, Zoia; Wesel, Emily; Castellanos, Jacqueline; Chikka, Rahul; Distler, Margaret G.; Eskin, Eleazar; Flint, Jonathan; Mangul, Serghei 分享 收藏
Critical Assessment of Metagenome Interpretation: the second round of challenges Meyer, Fernando; Fritz, Adrian; Deng, Zhi-Luo; Koslicki, David; Lesker, Till Robin; Gurevich, Alexey; Robertson, Gary; Alser, Mohammed; Antipov, Dmitry; Beghini, Francesco; Bertrand, Denis; Brito, Jaqueline J.; Brown, C. Titus; Buchmann, Jan; Buluc, Aydin; Chen, Bo; Chikhi, Rayan; Clausen, Philip T. L. C.; Cristian, Alexandru; Dabrowski, Piotr Wojciech; Darling, Aaron E.; Egan, Rob; Eskin, Eleazar; Georganas, Evangelos; Goltsman, Eugene; Gray, Melissa A.; Hansen, Lars Hestbjerg; Hofmeyr, Steven; Huang, Pingqin; Irber, Luiz; Jia, Huijue; Jorgensen, Tue Sparholt; Kieser, Silas D.; Klemetsen, Terje; Kola, Axel; Kolmogorov, Mikhail; Korobeynikov, Anton; Kwan, Jason; LaPierre, Nathan; Lemaitre, Claire; Li, Chenhao; Limasset, Antoine; Malcher-Miranda, Fabio; Mangul, Serghei; Marcelino, Vanessa R.; Marchet, Camille; Marijon, Pierre; Meleshko, Dmitry; Mende, Daniel R.; Milanese, Alessio; Nagarajan, Niranjan; Nissen, Jakob; Nurk, Sergey; Oliker, Leonid; Paoli, Lucas; Peterlongo, Pierre; Piro, Vitor C.; Porter, Jacob S.; Rasmussen, Simon; Rees, Evan R.; Reinert, Knut; Renard, Bernhard; Robertsen, Espen Mikal; Rosen, Gail L.; Ruscheweyh, Hans-Joachim; Sarwal, Varuni; Segata, Nicola; Seiler, Enrico; Shi, Lizhen; Sun, Fengzhu; Sunagawa, Shinichi; Sorensen, Soren Johannes; Thomas, Ashleigh; Tong, Chengxuan; Trajkovski, Mirko; Tremblay, Julien; Uritskiy, Gherman; Vicedomini, Riccardo; Wang, Zhengyang; Wang, Ziye; Wang, Zhong; Warren, Andrew; Willassen, Nils Peder; Yelick, Katherine; You, Ronghui; Zeller, Georg; Zhao, Zhengqiao; Zhu, Shanfeng; Zhu, Jie; Garrido-Oter, Ruben; Gastmeier, Petra; Hacquard, Stephane; Haeussler, Susanne; Khaledi, Ariane; Maechler, Friederike; Mesny, Fantin; Radutoiu, Simona; Schulze-Lefert, Paul; Smit, Nathiana; Strowig, Till; Bremges, Andreas; Sczyrba, Alexander; McHardy, Alice Carolyn 分享 收藏
Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA Guo, Longhua; Boocock, James; Hilt, Evann E.; Chandrasekaran, Sukantha; Zhang, Yi; Munugala, Chetan; Sathe, Laila; Alexander, Noah; Arboleda, Valerie A.; Flint, Jonathan; Eskin, Eleazar; Luo, Chongyuan; Yang, Shangxin; Garner, Omai B.; Yin, Yi; Bloom, Joshua S.; Kruglyak, Leonid 分享 收藏
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Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples Bloom, Joshua S.; Sathe, Laila; Munugala, Chetan; Jones, Eric M.; Gasperini, Molly; Lubock, Nathan B.; Yarza, Fauna; Thompson, Erin M.; Kovary, Kyle M.; Park, Jimin; Marquette, Dawn; Kay, Stephania; Lucas, Mark; Love, TreQuan; Booeshaghi, A. Sina; Brandenberg, Oliver F.; Guo, Longhua; Boocock, James; Hochman, Myles; Simpkins, Scott W.; Lin, Isabella; LaPierre, Nathan; Hong, Duke; Zhang, Yi; Oland, Gabriel; Choe, Bianca Judy; Chandrasekaran, Sukantha; Hilt, Evann E.; Butte, Manish J.; Damoiseaux, Robert; Kravit, Clifford; Cooper, Aaron R.; Yin, Yi; Pachter, Lior; Garner, Omai B.; Flint, Jonathan; Eskin, Eleazar; Luo, Chongyuan; Kosuri, Sriram; Kruglyak, Leonid; Arboleda, Valerie A. 分享 收藏
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Genetic determinants of ammonia-induced acute lung injury in mice Bein, Kiflai; Ganguly, Koustav; Martin, Timothy M.; Concel, Vincent J.; Brant, Kelly A.; Di, Y. P. Peter; Upadhyay, Swapna; Fabisiak, James P.; Vuga, Louis J.; Kaminski, Naftali; Kostem, Emrah; Eskin, Eleazar; Prows, Daniel R.; Jang, Ann-Soo; Leikauf, George D. 分享 收藏
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Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing (vol 11, 3126, 2020) Mandric, Igor; Rotman, Jeremy; Yang, Harry Taegyun; Strauli, Nicolas; Montoya, Dennis J.; Van der Wey, William; Ronas, Jiem R.; Statz, Benjamin; Yao, Douglas; Petrova, Velislava; Zelikovsky, Alex; Spreafico, Roberto; Shifman, Sagiv; Zaitlen, Noah; Rossetti, Maura; Ansel, K. Mark; Eskin, Eleazar; Mangul, Serghei 分享 收藏
Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing Mandric, Igor; Rotman, Jeremy; Yang, Harry Taegyun; Strauli, Nicolas; Montoya, Dennis J.; Van Der Wey, William; Ronas, Jiem R.; Statz, Benjamin; Yao, Douglas; Petrova, Velislava; Zelikovsky, Alex; Spreafico, Roberto; Shifman, Sagiv; Zaitlen, Noah; Rossetti, Maura; Ansel, K. Mark; Eskin, Eleazar; Mangul, Serghei 分享 收藏
Genome-wide analysis highlights contribution of immune system pathways to the genetic architecture of asthma Han, Yi; Jia, Qiong; Jahani, Pedram Shafiei; Hurrell, Benjamin P.; Pan, Calvin; Huang, Pin; Gukasyan, Janet; Woodward, Nicholas C.; Eskin, Eleazar; Gilliland, Frank D.; Akbari, Omid; Hartiala, Jaana A.; Allayee, Hooman 分享 收藏
Benchmarking of computational error-correction methods for next-generation sequencing data Mitchell, Keith; Brito, Jaqueline J.; Mandric, Igor; Wu, Qiaozhen; Knyazev, Sergey; Chang, Sei; Martin, Lana S.; Karlsberg, Aaron; Gerasimov, Ekaterina; Littman, Russell; Hill, Brian L.; Wu, Nicholas C.; Yang, Harry Taegyun; Hsieh, Kevin; Chen, Linus; Littman, Eli; Shabani, Taylor; Enik, German; Yao, Douglas; Sun, Ren; Schroeder, Jan; Eskin, Eleazar; Zelikovsky, Alex; Skums, Pavel; Pop, Mihai; Mangul, Serghei 分享 收藏
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