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Louis‐Félix Nothias

Universite Cote d'Azur and CNRS

47H指数
190论文数
4.1W被引数
收录论文 71
发表时间
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Computational metabolomics at scale: from open data to insight大规模计算代谢组学：从开放数据到见解
errCurrent Opinion in Biotechnology
IF7
err2026-08-05
err0
PREAI
errEwy A Mathé; Justin JJ van der Hooft; Haley Chatelaine; Louis-Félix Nothias; Stacey N Reinke; Juan Antonio Vizcaíno; Egon L Willighagen; Timothy MD Ebbels; Soha Hassoun
err分享
err收藏
MetaboT: an LLM-based multi-agent framework for interactive analysis of mass spectrometry metabolomics knowledge graphsMetaboT：一种基于LLM的多代理框架，用于质谱代谢组学知识图谱的交互式分析
errJournal of Cheminformatics
IF5.7
err2026-07-24
err0
errOAAI
errMadina Bekbergenova; Lucas Pradi; Benjamin Navet; Emma Tysinger; Franck Michel; Matthieu Feraud; Yousouf Taghzouti; Yan Zhou Chen; Olivier Kirchhoffer; Florence Mehl; Martin Legrand; Tao Jiang; Marco Pagni; Soha Hassoun; Jean-Luc Wolfender; Wout Bittremieux; Fabien Gandon; Louis-Félix Nothias
err分享
err收藏
MSnLib: efficient generation of open multi-stage fragmentation mass spectral librariesMSnLib：开放式多级碎裂质谱谱库的高效生成
errNature Methods
IF32.1
err2025-09-15
err0
errOAAI
errCorinna Brungs; Robin Schmid; Steffen Heuckeroth; Aninda Mazumdar; Matúš Drexler; Pavel Šácha; Pieter C. Dorrestein; Daniel Petras; Louis-Felix Nothias; Václav Veverka; Radim Nencka; Zdeněk Kameník; Tomáš Pluskal
err分享
err收藏
Microbial Community Metabolism of Coral Reef Exometabolomes Broadens the Chemodiversity of Labile Dissolved Organic Matter珊瑚礁微生物群落对外分泌代谢组进行代谢作用，扩大了易分解溶解有机物的化学多样性。
errENVIRONMENTAL MICROBIOLOGY
IF4
err2025-03-19
err0
errOAAI
errQuinlan, Zachary A.; Nelson, Craig E.; Koester, Irina; Petras, Daniel; Nothias, Louis-Felix; Comstock, Jacqueline; White, Brandie M.; Aluwihare, Lihini I.; Bailey, Barbara A.; Carlson, Craig A.; Dorrestein, Pieter C.; Haas, Andreas F.; Wegley Kelly, Linda
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Prioritization of novel anti-infective stilbene derivatives by combining metabolomic data organization and a stringent 3R-infection model in a knowledge graph通过结合代谢组学数据组织与严格的3R-感染模型，在知识图谱中对新型抗感染白藜芦醇衍生物进行优先级排序
errRSC ADVANCES
IF4.6
err2025-01-01
err0
errOAAI
errKirchhoffer, Olivier Auguste; Quiros-Guerrero, Luis; Nitschke, Jahn; Nothias, Louis-Felix; Burdet, Frederic; Marcourt, Laurence; Hanna, Nabil; Mehl, Florence; David, Bruno; Grondin, Antonio; Queiroz, Emerson Ferreira; Pagni, Marco; Soldati, Thierry; Wolfender, Jean-Luc
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Reproducible mass spectrometry data processing and compound annotation in MZmine 3
errNATURE PROTOCOLS
IF16
err2024-05-20
err6
PREAI
errHeuckeroth, Steffen; Damiani, Tito; Smirnov, Aleksandr; Mokshyna, Olena; Brungs, Corinna; Korf, Ansgar; Smith, Joshua David; Stincone, Paolo; Dreolin, Nicola; Nothias, Louis-Felix; Hyoetylaeinen, Tuulia; Oresic, Matej; Karst, Uwe; Dorrestein, Pieter C.; Petras, Daniel; Du, Xiuxia; van der Hooft, Justin J. J.; Schmid, Robin; Pluskal, Tomas
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Functional metabolomics of the human scalp: a metabolic niche for Staphylococcus epidermidis
errMSYSTEMS
IF4.6
err2024-02-20
err0
errOAAI
errNothias, Louis-Felix; Schmid, Robin; Garlet, Allison; Cameron, Hunter; Leoty-Okombi, Sabrina; Andre-Frei, Valerie; Fuchs, Regine; Dorrestein, Pieter C.; Ternes, Philipp
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Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics开放获取存储库-用于非靶向代谢组学的规模传播最近邻可疑光谱库
errNATURE COMMUNICATIONS
IF15.7
err2023-12-20
err10
errOAAI
errBittremieux, Wout; Avalon, Nicole E.; Thomas, Sydney P.; Kakhkhorov, Sarvar A.; Aksenov, Alexander A.; Gomes, Paulo Wender P.; Aceves, Christine M.; Caraballo-Rodriguez, Andres Mauricio; Gauglitz, Julia M.; Gerwick, William H.; Huan, Tao; Jarmusch, Alan K.; Kaddurah-Daouk, Rima F.; Kang, Kyo Bin; Kim, Hyun Woo; Kondic, Todor; Mannochio-Russo, Helena; Meehan, Michael J.; Melnik, Alexey V.; Nothias, Louis-Felix; O'Donovan, Claire; Panitchpakdi, Morgan; Petras, Daniel; Schmid, Robin; Schymanski, Emma L.; van der Hooft, Justin J. J.; Weldon, Kelly C.; Yang, Heejung; Xing, Shipei; Zemlin, Jasmine; Wang, Mingxun; Dorrestein, Pieter C.
err分享
err收藏
DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance DataDeepSAT: 从核磁共振数据中学习分子结构
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2023-08-07
err15
errOAAI
errKim, Hyun Woo; Zhang, Chen; Reher, Raphael; Wang, Mingxun; Alexander, Kelsey L.; Nothias, Louis-Felix; Han, Yoo Kyong; Shin, Hyeji; Lee, Ki Yong; Lee, Kyu Hyeong; Kim, Myeong Ji; Dorrestein, Pieter C.; Gerwick, William H.; Cottrell, Garrison W.
err分享
err收藏
Integrative analysis of multimodal mass spectrometry data in MZmine 3MZmine 3中多模态质谱数据的综合分析
errNATURE BIOTECHNOLOGY
IF41.7
err2023-03-01
err276
errOAAI
errSchmid, Robin; Heuckeroth, Steffen; Korf, Ansgar; Smirnov, Aleksandr; Myers, Owen; Dyrlund, Thomas S.; Bushuiev, Roman; Murray, Kevin J.; Hoffmann, Nils; Lu, Miaoshan; Sarvepalli, Abinesh; Zhang, Zheng; Fleischauer, Markus; Duehrkop, Kai; Wesner, Mark; Hoogstra, Shawn J.; Rudt, Edward; Mokshyna, Olena; Brungs, Corinna; Ponomarov, Kirill; Mutabdzija, Lana; Damiani, Tito; Pudney, Chris J.; Earll, Mark; Helmer, Patrick O.; Fallon, Timothy R.; Schulze, Tobias; Rivas-Ubach, Albert; Bilbao, Aivett; Richter, Henning; Nothias, Louis-Felix; Wang, Mingxun; Oresic, Matej; Weng, Jing-Ke; Boecker, Sebastian; Jeibmann, Astrid; Hayen, Heiko; Karst, Uwe; Dorrestein, Pieter C.; Petras, Daniel; Du, Xiuxia; Pluskal, Tomas
err分享
err收藏
Illuminating the dark metabolome of Pseudo-nitzschia-microbiome associations照亮伪nitzschia-microbiome关联的黑暗代谢组
errENVIRONMENTAL MICROBIOLOGY
IF4
err2022-11-16
err15
errOAAI
errKoester, Irina; Quinlan, Zachary A.; Nothias, Louis-Felix; White, Margot E.; Rabines, Ariel; Petras, Daniel; Brunson, John K.; Duehrkop, Kai; Ludwig, Marcus; Boecker, Sebastian; Azam, Farooq; Allen, Andrew E.; Dorrestein, Pieter C.; Aluwihare, Lihini I.
err分享
err收藏
Inventa: A computational tool to discover structural novelty in natural extracts libraries
errFRONTIERS IN MOLECULAR BIOSCIENCES
IF4
err2022-11-11
err6
errOAAI
errQuiros-Guerrero, Luis-Manuel; Nothias, Louis-Felix; Gaudry, Arnaud; Marcourt, Laurence; Allard, Pierre-Marie; Rutz, Adriano; David, Bruno; Queiroz, Emerson Ferreira; Wolfender, Jean-Luc
err分享
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Comparative metabolomic analysis reveals shared and unique chemical interactions in sponge holobionts比较代谢组学分析揭示了海绵全离子中共享和独特的化学相互作用
errMICROBIOME
IF12.7
err2022-02-01
err14
errOAAI
errZhang, Shan; Song, Weizhi; Nothias, Louis-Felix; Couvillion, Sneha P.; Webster, Nicole; Thomas, Torsten
err分享
err收藏
Tandem Mass Spectrometry Molecular Networking as a Powerful and Efficient Tool for Drug Metabolism Studies串联质谱分子网络作为药物代谢研究的强大而有效的工具
errANALYTICAL CHEMISTRY
IF6.7
err2022-01-05
err24
PREAI
errYu, Jun Sang; Nothias, Louis-Felix; Wang, Mingxun; Kim, Dong Hyun; Dorrestein, Pieter C.; Kang, Kyo Bin; Yoo, Hye Hyun
err分享
err收藏
NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural ProductsNPClassifier: 一种基于深度神经网络的天然产物结构分类工具
errJOURNAL OF NATURAL PRODUCTS
IF3.6
err2021-10-18
err218
errOAAI
errKim, Hyun Woo; Wang, Mingxun; Leber, Christopher A.; Nothias, Louis-Felix; Reher, Raphael; Kang, Kyo Bin; van der Hooft, Justin J. J.; Dorrestein, Pieter C.; Gerwick, William H.; Cottrell, Garrison W.
err分享
err收藏
High-confidence structural annotation of metabolites absent from spectral libraries光谱库中缺少的代谢物的高置信度结构注释
errNATURE BIOTECHNOLOGY
IF41.7
err2021-10-14
err125
errOAAI
errHoffmann, Martin A.; Nothias, Louis-Felix; Ludwig, Marcus; Fleischauer, Markus; Gentry, Emily C.; Witting, Michael; Dorrestein, Pieter C.; Duehrkop, Kai; Boecker, Sebastian
err分享
err收藏
Nerpa: A Tool for Discovering Biosynthetic Gene Clusters of Bacterial Nonribosomal Peptides
errMETABOLITES
IF3.7
err2021-10-11
err14
errOAAI
errKunyavskaya, Olga; Tagirdzhanov, Azat M.; Caraballo-Rodriguez, Andres Mauricio; Nothias, Louis-Felix; Dorrestein, Pieter C.; Korobeynikov, Anton; Mohimani, Hosein; Gurevich, Alexey
err分享
err收藏
Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden
errMSYSTEMS
IF4.6
err2021-08-31
err3
errOAAI
errCaraballo-Rodriguez, Andres Mauricio; Puckett, Sara P.; Kyle, Kathleen E.; Petras, Daniel; da Silva, Ricardo; Nothias, Louis-Felix; Ernst, Madeleine; van der Hooft, Justin J. J.; Tripathi, Anupriya; Wang, Mingxun; Balunas, Marcy J.; Klassen, Jonathan L.; Dorrestein, Pieter C.
err分享
err收藏
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environmentGNPS环境中基于质谱的代谢组学的离子识别分子网络
errNATURE COMMUNICATIONS
IF15.7
err2021-06-22
err138
errOAAI
errSchmid, Robin; Petras, Daniel; Nothias, Louis-Felix; Wang, Mingxun; Aron, Allegra T.; Jagels, Annika; Tsugawa, Hiroshi; Rainer, Johannes; Garcia-Aloy, Mar; Duhrkop, Kai; Korf, Ansgar; Pluskal, Tomas; Kamenik, Zdenek; Jarmusch, Alan K.; Caraballo-Rodriguez, Andres Mauricio; Weldon, Kelly C.; Nothias-Esposito, Melissa; Aksenov, Alexander A.; Bauermeister, Anelize; Orio, Andrea Albarracin; Grundmann, Carlismari O.; Vargas, Fernando; Koester, Irina; Gauglitz, Julia M.; Gentry, Emily C.; Hovelmann, Yannick; Kalinina, Svetlana A.; Pendergraft, Matthew A.; Panitchpakdi, Morgan; Tehan, Richard; Le Gouellec, Audrey; Aleti, Gajender; Russo, Helena Mannochio; Arndt, Birgit; Hubner, Florian; Hayen, Heiko; Zhi, Hui; Raffatellu, Manuela; Prather, Kimberly A.; Aluwihare, Lihini, I; Bocker, Sebastian; McPhail, Kerry L.; Humpf, Hans-Ulrich; Karst, Uwe; Dorrestein, Pieter C.
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Genomic and Metabolomic Analysis of the Potato Common Scab Pathogen Streptomyces scabiei
errACS OMEGA
IF4.3
err2021-04-20
err23
errOAAI
errLiu, Jingyu; Nothias, Louis-Felix; Dorrestein, Pieter C.; Tahlan, Kapil; Bignell, Dawn R. D.
err分享
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