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Pipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold standard Pipeline Olympics：针对DNA甲基化测序数据，基于实验金标准的可延续性计算工作流基准测试 Lin, Yu-Yu; Breuer, Kersten; Weichenhan, Dieter; Lafrenz, Pascal; Sarnataro, Antonella; Wilk, Agata; Chepeleva, Maryna; Mucke, Oliver; Schonung, Maximilian; Petermann, Franziska; Kensche, Philip Reiner; Weiser, Lena; Thommen, Frank; Giacomelli, Gideon; Nordstroem, Karl; Gonzalez-Avalos, Edahi; Merkel, Angelika; Kretzmer, Helene; Fischer, Jonas; Kramer, Stephen; Iskar, Murat; Wolf, Stephan; Buchhalter, Ivo; Esteller, Manel; Lawerenz, Christian; Twardziok, Sven; Zapatka, Marc; Hovestadt, Volker; Schlesner, Matthias; Schulz, Marcel H.; Hoffmann, Steve; Gerhauser, Clarissa; Walter, Jorn; Hartmann, Mark; Lipka, Daniel B.; Assenov, Yassen; Bock, Christoph; Plass, Christoph; Toth, Reka; Lutsik, Pavlo 分享 收藏
Embryonic macrophages orchestrate niche cell homeostasis for the establishment of the definitive hematopoietic stem cell pool 胚胎巨噬细胞调控微环境细胞稳态以建立定型的造血干细胞池 Percin, Guelce; Riege, Konstantin; Froebel, Julia; Metz, Jonas; Culemann, Stephan; Lesche, Mathias; Reinhardt, Susanne; Hoefer, Thomas; Hoffmann, Steve; Waskow, Claudia 分享 收藏
Subtyping Burkitt Lymphoma by DNA Methylation 通过DNA甲基化对Burkitt淋巴瘤进行分型 Glaser, Selina; Wagener, Rabea; Kretzmer, Helene; Lopez, Cristina; Baptista, Maria Joao; Bens, Susanne; Bernhart, Stephan; Bhatia, Kishor; Borkhardt, Arndt; Elgaafary, Shaymaa; Hoffmann, Steve; Huebschmann, Daniel; Hummel, Michael; Klapper, Wolfram; Kolarova, Julia; Kreuz, Markus; Lazzi, Stefano; Loeffler, Markus; Navarro, Jose Tomas; Neequaye, Janet; Onyango, Noel; Onyuma, Timothy; Ott, German; Radlwimmer, Bernhard; Rohde, Marius; Rosenwald, Andreas; Rosolowski, Maciej; Schlesner, Matthias; Szczepanowski, Monika; Tapia, Gustavo; Woessmann, Wilhelm; Kueppers, Ralf; Truemper, Lorenz; Leoncini, Lorenzo; Lichter, Peter; del Val, Coral; Ammerpohl, Ole; Burkhardt, Birgit; Mbulaiteye, Sam M.; Siebert, Reiner 分享 收藏
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Transthyretin Orchestrates Vitamin B12-Induced Stress Resilience Stein, Gregor; Aly, Janine S.; Manzolillo, Annamaria; Lange, Lisa; Riege, Konstantin; Hussain, Iqra; Heller, Elisabeth A.; Cubillos, Susana; Ernst, Thomas; Hubner, Christian A.; Turecki, Gustavo; Hoffmann, Steve; Engmann, Olivia 分享 收藏
Hydra has mammal-like mutation rates facilitating fast adaptation despite its nonaging phenotype Sahm, Arne; Riege, Konstantin; Groth, Marco; Bens, Martin; Kraus, Johann; Fischer, Martin; Kestler, Hans; Englert, Christoph; Schaible, Ralf; Platzer, Matthias; Hoffmann, Steve 分享 收藏
Npbwr1 signaling mediates fast antidepressant action Stein, Gregor; Aly, Janine S.; Lange, Lisa; Manzolillo, Annamaria; Riege, Konstantin; Brancato, Anna; Huebner, Christian A.; Turecki, Gustavo; Hoffmann, Steve; Engmann, Olivia 分享 收藏
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Nonlinear DNA methylation trajectories in aging male mice Olecka, Maja; van Boemmel, Alena; Best, Lena; Haase, Madlen; Foerste, Silke; Riege, Konstantin; Dost, Thomas; Flor, Stefano; Witte, Otto W.; Franzenburg, Soeren; Groth, Marco; von Eyss, Bjoern; Kaleta, Christoph; Frahm, Christiane; Hoffmann, Steve 分享 收藏
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Recurrent DNMT3B rearrangements are associated with unfavorable outcome in dicentric (9;20)-positive pediatric BCP-ALL Antic, Zeljko; van Boemmel, Alena; Riege, Konstantin; Lentes, Jana; Schroeder, Charlotte; Alten, Julia; Eckert, Cornelia; Fuhrmann, Lara; Steinemann, Doris; Lenk, Lennart; Schewe, Denis M.; Zimmermann, Martin; Schrappe, Martin; Schlegelberger, Brigitte; Cario, Gunnar; Hoffmann, Steve; Bergmann, Anke K. 分享 收藏
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Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision circRNA检测工具的大规模基准测试揭示了灵敏度的巨大差异，但精度却没有 Vromman, Marieke; Anckaert, Jasper; Bortoluzzi, Stefania; Buratin, Alessia; Chen, Chia-Ying; Chu, Qinjie; Chuang, Trees-Juen; Dehghannasiri, Roozbeh; Dieterich, Christoph; Dong, Xin; Flicek, Paul; Gaffo, Enrico; Gu, Wanjun; He, Chunjiang; Hoffmann, Steve; Izuogu, Osagie; Jackson, Michael S.; Jakobi, Tobias; Lai, Eric C.; Nuytens, Justine; Salzman, Julia; Santibanez-Koref, Mauro; Stadler, Peter; Thas, Olivier; Eynde, Eveline Vanden; Verniers, Kimberly; Wen, Guoxia; Westholm, Jakub; Yang, Li; Ye, Chu-Yu; Yigit, Nurten; Yuan, Guo-Hua; Zhang, Jinyang; Zhao, Fangqing; Vandesompele, Jo; Volders, Pieter-Jan 分享 收藏
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Multi-omics analysis identifies RFX7 targets involved in tumor suppression and neuronal processes Schwab, Katjana; Coronel, Luis; Riege, Konstantin; Sacramento, Erika K.; Rahnis, Norman; Haeckes, David; Cirri, Emilio; Groth, Marco; Hoffmann, Steve; Fischer, Martin 分享 收藏
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