未登录 SPARKI: a tool for the statistical analysis of pathogen identification results SPARKI：一种用于病原体鉴定结果统计分析的工具 Boccacino, Jacqueline M.; Del Castillo Velasco-Herrera, Martin; Beale, Mathew A.; Billington, Jamie; Vermes, Ian; Obolenski, Sofia; Wong, Kim; Torrens, Laura; Moody, Sarah; Perdomo, Sandra; Cheema, Saamin; Francis, Bailey; Offord, Victoria; Butler, Adam P.; Adams, David J. 分享 收藏
Genomic evolution shapes prostate cancer disease type 基因组进化塑造前列腺癌疾病类型 Woodcock, Dan J.; Sahli, Atef; Teslo, Ruxandra; Bhandari, Vinayak; Gruber, Andreas J.; Ziubroniewicz, Aleksandra; Gundem, Gunes; Xu, Yaobo; Butler, Adam; Anokian, Ezequiel; Pope, Bernard J.; Jung, Chol-Hee; Tarabichi, Maxime; Dentro, Stefan C.; Farmery, J. Henry R.; Van Loo, Peter; Warren, Anne Y.; Gnanapragasam, Vincent; Hamdy, Freddie C.; Bova, G. Steven; Foster, Christopher S.; Neal, David E.; Lu, Yong-Jie; Kote-Jarai, Zsofia; Fraser, Michael; Bristow, Robert G.; Boutros, Paul C.; Costello, Anthony J.; Corcoran, Niall M.; Hovens, Christopher M.; Massie, Charlie E.; Lynch, Andy G.; Brewer, Daniel S.; Eeles, Rosalind A.; Cooper, Colin S.; Wedge, David C. 分享 收藏
Diagnostic utility of whole genome sequencing in adults with B-other acute lymphoblastic leukemia Leongamornlert, Daniel; Gutierrez-Abril, Jesus; Lee, SooWah; Barretta, Emilio; Creasey, Thomas; Gundem, Gunes; Levine, Max F.; Arango-Ossa, Juan E.; Liosis, Konstantinos; Medina-Martinez, Juan S.; Alapi, Krisztina Zuborne; Kirkwood, Amy A.; Clifton-Hadley, Laura; Patrick, Pip; Jones, David; O'Neill, Laura; Butler, Adam P.; Harrison, Christine J.; Campbell, Peter; Patel, Bela; Mcoman, Anthony V.; Fielding, Adele K.; Papaemmanuli, Elli 分享 收藏
The architecture of clonal expansions in morphologically normal tissue from cancerous and non-cancerous prostates Buhigas, Claudia; Warren, Anne Y.; Leung, Wing-Kit; Whitaker, Hayley C.; Luxton, Hayley J.; Hawkins, Steve; Kay, Jonathan; Butler, Adam; Xu, Yaobo; Woodcock, Dan J.; Merson, Sue; Frame, Fiona M.; Sahli, Atef; Abascal, Federico; Martincorena, Inigo; Bova, G. Steven; Foster, Christopher S.; Campbell, Peter; Maitland, Norman J.; Neal, David E.; Massie, Charlie E.; Lynch, Andy G.; Eeles, Rosalind A.; Cooper, Colin S.; Wedge, David C.; Brewer, Daniel S. 分享 收藏
Unified classification and risk-stratification in Acute Myeloid Leukemia 急性髓系白血病的统一分类与风险分层 Tazi, Yanis; Ossa, Juan Arango; Zhou, Yangyu; Bernard, Elsa; Thomas, Ian; Gilkes, Amanda; Freeman, Sylvie; Pradat, Yoann; Johnson, Sean; Hills, Robert; Dillon, Richard; Levine, Max; Leongamornlert, Dan; Butler, Adam; Ganser, Arnold; Bullinger, Lars; Doehner, Konstanze; Ottmann, Oliver; Adams, Richard; Doehner, Hartmut; Campbell, Peter; Burnett, Alan; Dennis, Michael; Russell, Nigel; Devlin, Sean; Huntly, Brian; Papaemmanuil, Elli 分享 收藏
Rare Germline Variants Are Associated with Rapid Biochemical Recurrence After Radical Prostate Cancer Treatment: A Pan Prostate Cancer Group Study 罕见种系变异与前列腺癌根治性治疗后快速生化复发相关: 一项泛前列腺癌组研究 Burns, Daniel; Anokian, Ezequiel; Saunders, Edward J.; Bristow, Robert G.; Fraser, Michael; Reimand, Juri; Schlomm, Thorsten; Sauter, Guido; Brors, Benedikt; Korbel, Jan; Weischenfeldt, Joachim; Waszak, Sebastian M.; Corcoran, Niall M.; Jung, Chol-Hee; Pope, Bernard J.; Hovens, Chris M.; Cancel-Tassin, Geraldine; Cussenot, Olivier; Loda, Massimo; Sander, Chris; Hayes, Vanessa M.; Sorensen, Karina Dalsgaard; Lu, Yong-Jie; Hamdy, Freddie C.; Foster, Christopher S.; Gnanapragasam, Vincent; Butler, Adam; Lynch, Andy G.; Massie, Charlie E.; Woodcock, Dan J.; Cooper, Colin S.; Wedge, David C.; Brewer, Daniel S.; Kote-Jarai, Zsofia; Eeles, Rosalind A. 分享 收藏
Aberrant integration of Hepatitis B virus DNA promotes major restructuring of human hepatocellular carcinoma genome architecture 乙型肝炎病毒DNA的异常整合促进人类肝细胞癌基因组结构的重大重组 Alvarez, Eva G.; Demeulemeester, Jonas; Otero, Paula; Jolly, Clemency; Garcia-Souto, Daniel; Pequeno-Valtierra, Ana; Zamora, Jorge; Tojo, Marta; Temes, Javier; Baez-Ortega, Adrian; Rodriguez-Martin, Bernardo; Oitaben, Ana; Bruzos, Alicia L.; Martinez-Fernandez, Monica; Haase, Kerstin; Zumalave, Sonia; Abal, Rosanna; Rodriguez-Castro, Jorge; Rodriguez-Casanova, Aitor; Diaz-Lagares, Angel; Li, Yilong; Raine, Keiran M.; Butler, Adam P.; Otero, Iago; Ono, Atsushi; Aikata, Hiroshi; Chayama, Kazuaki; Ueno, Masaki; Hayami, Shinya; Yamaue, Hiroki; Maejima, Kazuhiro; Blanco, Miguel G.; Forns, Xavier; Rivas, Carmen; Ruiz-Banobre, Juan; Perez-del-Pulgar, Sofia; Torres-Ruiz, Raul; Rodriguez-Perales, Sandra; Garaigorta, Urtzi; Campbell, Peter J.; Nakagawa, Hidewaki; Van Loo, Peter; Tubio, Jose M. C. 分享 收藏
CDKN2A deletion is a frequent event associated with poor outcome in patients with peripheral T-cell lymphoma not otherwise specified (PTCL-NOS) Maura, Francesco; Dodero, Anna; Carniti, Cristiana; Bolli, Niccolo; Magni, Martina; Monti, Valentina; Cabras, Antonello; Leongamornlert, Daniel; Abascal, Federico; Diamond, Benjamin; Rodriguez-Martin, Bernardo; Zamora, Jorge; Butler, Adam; Martincorena, Inigo; Tubio, Jose M. C.; Campbell, Peter J.; Chiappella, Annalisa; Pruneri, Giancarlo; Corradini, Paolo 分享 收藏
Butler enables rapid cloud-based analysis of thousands of human genomes (vol 79, pg 134, 2019) Yakneen, Sergei; Waszak, Sebastian M.; Gertz, Michael; Korbel, Jan O.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Campbell, Peter J.; Chen, Zhaohong; Cho, Sunghoon; Choi, Wan; Clapham, Peter; Davis-Dusenbery, Brandi N.; De La Vega, Francisco M.; Demeulemeester, Jonas; Dow, Michelle T.; Dursi, Lewis Jonathan; Eils, Juergen; Eils, Roland; Ellrott, Kyle; Farcas, Claudiu; Favero, Francesco; Fayzullaev, Nodirjon; Ferretti, Vincent; Flicek, Paul; Fonseca, Nuno A.; Gelpi, Josep Ll.; Getz, Gad; Gibson, Bob; Grossman, Robert L.; Harismendy, Olivier; Heath, Allison P.; Heinold, Michael C.; Hess, Julian M.; Hofmann, Oliver; Hong, Jongwhi H.; Hudson, Thomas J.; Hutter, Barbara; Hutter, Carolyn M.; Hubschmann, Daniel; Imoto, Seiya; Ivkovic, Sinisa; Jeon, Seung-Hyup; Jiao, Wei; Jung, Jongsun; Kabbe, Rolf; Kahles, Andre; Kerssemakers, Jules N. A.; Kim, Hyung-Lae; Kim, Hyunghwan; Kim, Jihoon; Kim, Youngwook; Kleinheinz, Kortine; Koscher, Michael; Koures, Antonios; Kovacevic, Milena; Lawerenz, Chris; Leshchiner, Ignaty; Liu, Jia; Livitz, Dimitri; Mihaiescu, George L.; Mijalkovic, Sanja; Lazic, Ana Mijalkovic; Miyano, Satoru; Miyoshi, Naoki; Nahal-Bose, Hardeep K.; Nakagawa, Hidewaki; Nastic, Mia; Newhouse, Steven J.; Nicholson, Jonathan; O'Connor, Brian D.; Ocana, David; Ohi, Kazuhiro; Ohno-Machado, Lucila; Omberg, Larsson; Ouellette, B. F. Francis; Paramasivam, Nagarajan; Perry, Marc D.; Pihl, Todd D.; Prinz, Manuel; Puiggros, Montserrat; Radovic, Petar; Raine, Keiran M.; Rheinbay, Esther; Rosenberg, Mara; Royo, Romina; Ratsch, Gunnar; Saksena, Gordon; Schlesner, Matthias; Shorser, Solomon I.; Short, Charles; Sofia, Heidi J.; Spring, Jonathan; Stein, Lincoln D.; Struck, Adam J.; Tiao, Grace; Tijanic, Nebojsa; Torrents, David; Van Loo, Peter; Vazquez, Miguel; Vicente, David; Wala, Jeremiah A.; Wang, Zhining; Waszak, Sebastian M.; Weischenfeldt, Joachim; Werner, Johannes; Williams, Ashley; Woo, Youngchoon; Wright, Adam J.; Xiang, Qian; Yang, Liming; Yuen, Denis; Yung, Christina K.; Zhang, Junjun; Korbel, Jan O. 分享 收藏
Butler enables rapid cloud-based analysis of thousands of human genomes Butler能够对成千上万的人类基因组进行基于云的快速分析 Yakneen, Sergei; Waszak, Sebastian M.; Gertz, Michael; Korbel, Jan O.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Campbell, Peter J.; Chen, Zhaohong; Cho, Sunghoon; Choi, Wan; Clapham, Peter; Davis-Dusenbery, Brandi N.; De La Vega, Francisco M.; Demeulemeester, Jonas; Dow, Michelle T.; Dursi, Lewis Jonathan; Eils, Juergen; Eils, Roland; Ellrott, Kyle; Farcas, Claudiu; Favero, Francesco; Fayzullaev, Nodirjon; Ferretti, Vincent; Flicek, Paul; Fonseca, Nuno A.; Gelpi, Josep Ll; Getz, Gad; Gibson, Bob; Grossman, Robert L.; Harismendy, Olivier; Heath, Allison P.; Heinold, Michael C.; Hess, Julian M.; Hofmann, Oliver; Hong, Jongwhi H.; Hudson, Thomas J.; Hutter, Barbara; Hutter, Carolyn M.; Huebschmann, Daniel; Imoto, Seiya; Ivkovic, Sinisa; Jeon, Seung-Hyup; Jiao, Wei; Jung, Jongsun; Kabbe, Rolf; Kahles, Andre; Kerssemakers, Jules N. A.; Kim, Hyung-Lae; Kim, Hyunghwan; Kim, Jihoon; Kim, Youngwook; Kleinheinz, Kortine; Koscher, Michael; Koures, Antonios; Kovacevic, Milena; Lawerenz, Chris; Leshchiner, Ignaty; Liu, Jia; Livitz, Dimitri; Mihaiescu, George L.; Mijalkovic, Sanja; Lazic, Ana Mijalkovic; Miyano, Satoru; Miyoshi, Naoki; Nahal-Bose, Hardeep K.; Nakagawa, Hidewaki; Nastic, Mia; Newhouse, Steven J.; Nicholson, Jonathan; O'Connor, Brian D.; Ocana, David; Ohi, Kazuhiro; Ohno-Machado, Lucila; Omberg, Larsson; Ouellette, B. F. Francis; Paramasivam, Nagarajan; Perry, Marc D.; Pihl, Todd D.; Prinz, Manuel; Puiggros, Montserrat; Radovic, Petar; Raine, Keiran M.; Rheinbay, Esther; Rosenberg, Mara; Royo, Romina; Raetsch, Gunnar; Saksena, Gordon; Schlesner, Matthias; Shorser, Solomon, I; Short, Charles; Sofia, Heidi J.; Spring, Jonathan; Stein, Lincoln D.; Struck, Adam J.; Tiao, Grace; Tijanic, Nebojsa; Torrents, David; Van Loo, Peter; Vazquez, Miguel; Vicente, David; Wala, Jeremiah A.; Wang, Zhining; Weischenfeldt, Joachim; Werner, Johannes; Williams, Ashley; Woo, Youngchoon; Wright, Adam J.; Xiang, Qian; Yang, Liming; Yuen, Denis; Yung, Christina K.; Zhang, Junjun 分享 收藏
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition 全基因组的泛癌症分析确定了由LINE-1反转录转座促进的驱动程序重排 Rodriguez-Martin, Bernardo; Alvarez, Eva G.; Baez-Ortega, Adrian; Zamora, Jorge; Supek, Fran; Demeulemeester, Jonas; Santamarina, Martin; Ju, Young Seok; Temes, Javier; Garcia-Souto, Daniel; Detering, Harald; Li, Yilong; Rodriguez-Castro, Jorge; Dueso-Barroso, Ana; Bruzos, Alicia L.; Dentro, Stefan C.; Blanco, Miguel G.; Contino, Gianmarco; Ardeljan, Daniel; Tojo, Marta; Roberts, Nicola D.; Zumalave, Sonia; Edwards, Paul A. W.; Weischenfeldt, Joachim; Puiggros, Montserrat; Chong, Zechen; Chen, Ken; Lee, Eunjung Alice; Wala, Jeremiah A.; Raine, Keiran; Butler, Adam; Waszak, Sebastian M.; Navarro, Fabio C. P.; Schumacher, Steven E.; Monlong, Jean; Maura, Francesco; Bolli, Niccolo; Bourque, Guillaume; Gerstein, Mark; Park, Peter J.; Wedge, David C.; Beroukhim, Rameen; Torrents, David; Korbel, Jan O.; Martincorena, Inigo; Fitzgerald, Rebecca C.; Van Loo, Peter; Kazazian, Haig H.; Burns, Kathleen H.; Campbell, Peter J.; Tubio, Jose M. C.; Akdemir, Kadir C.; Boutros, Paul C.; Bowtell, David D. L.; Brors, Benedikt; Chan, Kin; Cortes-Ciriano, Isidro; Dunford, Andrew J.; Edwards, Paul A.; Estivill, Xavier; Etemadmoghadam, Dariush; Feuerbach, Lars; Fink, J. Lynn; Frenkel-Morgenstern, Milana; Garsed, Dale W.; Gordenin, Dmitry A.; Haan, David; Haber, James E.; Hess, Julian M.; Hutter, Barbara; Imielinski, Marcin; Jones, David T. W.; Kazanov, Marat D.; Klimczak, Leszek J.; Koh, Youngil; Kumar, Kiran; Lee, Jake June-Koo; Lynch, Andy G.; Macintyre, Geoff; Markowetz, Florian; Martinez-Fundichely, Alexander; Meyerson, Matthew; Miyano, Satoru; Nakagawa, Hidewaki; Ossowski, Stephan; Pearson, John, V; Rippe, Karsten; Roberts, Steven A.; Scully, Ralph; Shackleton, Mark; Sidiropoulos, Nikos; Sieverling, Lina; Stewart, Chip; Villasante, Izar; Waddell, Nicola; Yang, Lixing; Yao, Xiaotong; Yoon, Sung-Soo; Zhang, Cheng-Zhong 分享 收藏
RNAmut: robust identification of somatic mutations in acute myeloid leukemia using RNA-sequencing Gu, Muxin; Zwiebel, Maximillian; Ong, Swee Hoe; Boughton, Nick; Nomdedeu, Josep; Basheer, Faisal; Nannya, Yasuhito; Quiros, Pedro M.; Ogawa, Seishi; Cazzola, Mario; Rad, Roland; Butler, Adam P.; Vijayabaskar, M. S.; Vassiliou, George S. 分享 收藏
Functional linkage of gene fusions to cancer cell fitness assessed by pharmacological and CRISPR-Cas9 screening Picco, Gabriele; Chen, Elisabeth D.; Alonso, Luz Garcia; Behan, Fiona M.; Goncalves, Emanuel; Bignell, Graham; Matchan, Angela; Fu, Beiyuan; Banerjee, Ruby; Andersonl, Elizabeth; Butler, Adam; Benes, Cyril H.; McDermott, Ultan; Dow, David; Iorio, Francesco; Stronach, Euan; Yang, Fengtang; Yusa, Kosuke; Saez-Rodriguez, Julio; Garnett, Mathew J. 分享 收藏
Integration of transcriptional and mutational data simplifies the stratification of peripheral T-cell lymphoma Maura, Francesco; Agnelli, Luca; Leongamornlert, Daniel; Bolli, Niccolo; Chan, Wing C.; Dodero, Anna; Carniti, Cristiana; Heavican, Tayla B.; Pellegrinelli, Alessio; Pruneri, Giancarlo; Butler, Adam; Bhosle, Shriram G.; Chiappella, Annalisa; Di Rocco, Alice; Zinzani, Pier Luigi; Zaja, Francesco; Piva, Roberto; Inghirami, Giorgio; Wang, Wenyi; Palomero, Teresa; Iqbal, Javeed; Neri, Antonino; Campbell, Peter J.; Corradini, Paolo 分享 收藏
Classification and Personalized Prognosis in Myeloproliferative Neoplasms Grinfeld, J.; Nangalia, J.; Baxter, E. J.; Wedge, D. C.; Angelopoulos, N.; Cantrill, R.; Godfrey, A. L.; Papaemmanuil, E.; Gundem, G.; MacLean, C.; Cook, J.; O'Neil, L.; O'Meara, S.; Teague, J. W.; Butler, A. P.; Massie, C. E.; Williams, N.; Nice, F. L.; Andersen, C. L.; Hasselbalch, H. C.; Guglielmelli, P.; McMullin, M. F.; Vannucchi, A. M.; Harrison, C. N.; Gerstung, M.; Green, A. R.; Campbell, P. J. 分享 收藏
Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting Iorio, Francesco; Behan, Fiona M.; Goncalves, Emanuel; Bhosle, Shriram G.; Chen, Elisabeth; Shepherd, Rebecca; Beaver, Charlotte; Ansari, Rizwan; Pooley, Rachel; Wilkinson, Piers; Harper, Sarah; Butler, Adam P.; Stronach, Euan A.; Saez-Rodriguez, Julio; Yusa, Kosuke; Garnett, Mathew J. 分享 收藏
Analysis of the genomic landscape of multiple myeloma highlights novel prognostic markers and disease subgroups 多发性骨髓瘤基因组景观分析突出了新的预后标志物和疾病亚组 Bolli, Niccolo; Biancon, Giulia; Moarii, Matahi; Gimondi, Silvia; Li, Yilong; de Philippis, Chiara; Maura, Francesco; Sathiaseelan, Vijitha; Tai, Yu-Tzu; Mudie, Laura; O'Meara, Sarah; Raine, Keiran; Teague, Jon W.; Butler, Adam P.; Carniti, Cristiana; Gerstung, Moritz; Bagratuni, Tina; Kastritis, Efstathios; Dimopoulos, Meletios; Corradini, Paolo; Anderson, Kenneth C.; Moreau, Philippe; Minvielle, Stephane; Campbell, Peter J.; Papaemmanuil, Elli; Avet-Loiseau, Herve; Munshi, Nikhil C. 分享 收藏
The driver landscape of sporadic chordoma Tarpey, Patrick S.; Behjati, Sam; Young, Matthew D.; Martincorena, Inigo; Alexandrov, Ludmil B.; Farndon, Sarah J.; Guzzo, Charlotte; Hardy, Claire; Latimer, Calli; Butler, Adam P.; Teague, Jon W.; Shlien, Adam; Futreal, P. Andrew; Shah, Sohrab; Bashashati, Ali; Jamshidi, Farzad; Nielsen, Torsten O.; Huntsman, David; Baumhoer, Daniel; Brandner, Sebastian; Wunder, Jay; Dickson, Brendan; Cogswell, Patricia; Sommer, Josh; Phillips, Joanna J.; Amary, M. Fernanda; Tirabosco, Roberto; Pillay, Nischalan; Yip, Stephen; Stratton, Michael R.; Flanagan, Adrienne M.; Campbell, Peter J. 分享 收藏
Appraising the relevance of DNA copy number loss and gain in prostate cancer using whole genome DNA sequence data Camacho, Niedzica; Van Loo, Peter; Edwards, Sandra; Kay, Jonathan D.; Matthews, Lucy; Haase, Kerstin; Clark, Jeremy; Dennis, Nening; Thomas, Sarah; Kremeyer, Barbara; Zamora, Jorge; Butler, Adam P.; Gundem, Gunes; Merson, Sue; Luxton, Hayley; Hawkins, Steve; Ghori, Mohammed; Marsden, Luke; Lambert, Adam; Karaszi, Katalin; Pelvender, Gill; Massie, Charlie E.; Kote-Jarai, ZSofia; Raine, Keiran; Jones, David; Howat, William J.; Hazell, Steven; Livni, Naomi; Fisher, Cyril; Ogden, Christopher; Kumar, Pardee; Thompson, Alan; Nicol, David; Mayer, Erik; Dudderidge, Tim; Yu, Yongwei; Zhang, Hongwei; Shah, Nimish C.; Gnanapragasam, Vincent J.; Isaacs, William; Visakorpi, Tapio; Hamdy, Freddie; Berney, Dan; Verri, Clare; Warren, Anne Y.; Wedge, David C.; Lynch, Andrew G.; Foster, Christopher S.; Lu, Yong Jie; Bova, G. Steven; Whitaker, Hayley C.; McDermott, Ultan; Neal, David E.; Eeles, Rosalind; Coope, Colin S.; Brewer, Daniel S. 分享 收藏
Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma Behjati, Sam; Tarpey, Patrick S.; Haase, Kerstin; Ye, Hongtao; Young, Matthew D.; Alexandrov, Ludmil B.; Farndon, Sarah J.; Collord, Grace; Wedge, David C.; Martincorena, Inigo; Cooke, Susanna L.; Davies, Helen; Mifsud, William; Lidgren, Mathias; Martin, Sancha; Latimer, Calli; Maddison, Mark; Butler, Adam P.; Teague, Jon W.; Pillay, Nischalan; Shlien, Adam; McDermott, Ultan; Futreal, P. Andrew; Baumhoer, Daniel; Zaikova, Olga; Bjerkehagen, Bodil; Myklebost, Ola; Amary, M. Fernanda; Tirabosco, Roberto; Van Loo, Peter; Stratton, Michael R.; Flanagan, Adrienne M.; Campbell, Peter J. 分享 收藏
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