Amelia Schroeder - Publications, H-index & Citations

Amelia Schroeder

university of pennsylvania

11H指数

42论文数

1.7K被引数

收录论文 11

发表时间

Smart spatial omics (S2-omics) optimizes region of interest selection to capture molecular heterogeneity in diverse tissues 智能空间组学（S2-omics）优化感兴趣区域选择以捕获不同组织中的分子异质性

Nature Cell Biology

IF19.1

2025-11-26

OAAI

Musu Yuan; Kaitian Jin; Hanying Yan; Amelia Schroeder; Chunyu Luo; Sicong Yao; Bernhard Dumoulin; Jonathan Levinsohn; Tianhao Luo; Jean R. Clemenceau; Inyeop Jang; Minji Kim; Yunhe Liu; Minghua Deng; Emma E. Furth; Parker Wilson; Anupma Nayak; Idania Lubo; Luisa Maren Solis Soto; Linghua Wang; Jeong Hwan Park; Katalin Susztak; Tae Hyun Hwang; Mingyao Li

Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE 大规模化空间转录组学以应用于大尺寸组织：利用iSCALE超越传统平台，揭示细胞层面的组织架构

Nature Methods

IF32.1

2025-09-15

OAAI

Amelia Schroeder; Melanie L. Loth; Chunyu Luo; Sicong Yao; Hanying Yan; Daiwei Zhang; Sarbottam Piya; Edward Plowey; Wenxing Hu; Jean R. Clemenceau; Inyeop Jang; Minji Kim; Isabel Barnfather; Su Jing Chan; Taylor L. Reynolds; Thomas Carlile; Patrick Cullen; Ji-Youn Sung; Hui-Hsin Tsai; Jeong Hwan Park; Tae Hyun Hwang; Baohong Zhang; Mingyao Li

Developing a low-cost, open-source, locally manufactured workstation and computational pipeline for automated histopathology evaluation using deep learning

EBIOMEDICINE

IF10.8

2024-09-01

OAAI

Choudhury, Divya; Dolezal, James M.; Dyer, Emma; Kochanny, Sara; Ramesh, Siddhi; Howard, Frederick M.; Margalus, Jayson R.; Schroeder, Amelia; Schulte, Jefree; Garassino, Marina C.; Kather, Jakob N.; Pearson, Alexander T.

Unlocking the power of spatial omics with AI

NATURE METHODS

IF32.1

2024-08-09

PREAI

Coleman, Kyle; Schroeder, Amelia; Li, Mingyao

Inferring super-resolution tissue architecture by integrating spatial transcriptomics with histology 通过将空间转录组学与组织学相结合来推断超分辨率组织结构

NATURE BIOTECHNOLOGY

IF41.7

2024-01-02

PREAI

Zhang, Daiwei; Schroeder, Amelia; Yan, Hanying; Yang, Haochen; Hu, Jian; Lee, Michelle Y. Y.; Cho, Kyung S.; Susztak, Katalin; Xu, George X.; Feldman, Michael D.; Lee, Edward B.; Furth, Emma E.; Wang, Linghua; Li, Mingyao

Leveraging spatial transcriptomics data to recover cell locations in single-cell RNA-seq with CeLEry

NATURE COMMUNICATIONS

IF15.7

2023-07-08

OAAI

Zhang, Qihuang; Jiang, Shunzhou; Schroeder, Amelia; Hu, Jian; Li, Kejie; Zhang, Baohong; Dai, David; Lee, Edward B.; Xiao, Rui; Li, Mingyao

SpaDecon: cell-type deconvolution in spatial transcriptomics with semi-supervised learning SpaDecon: 具有半监督学习的空间转录组学中的细胞类型反卷积

COMMUNICATIONS BIOLOGY

IF5.1

2023-04-07

OAAI

Coleman, Kyle; Hu, Jian; Schroeder, Amelia; Lee, Edward B.; Li, Mingyao

A multi-use deep learning method for CITE-seq and single-cell RNA-seq data integration with cell surface protein prediction and imputation

NATURE MACHINE INTELLIGENCE

IF23.9

2022-10-27

OAAI

Lakkis, Justin; Schroeder, Amelia; Su, Kenong; Lee, Michelle Y. Y.; Bashore, Alexander C.; Reilly, Muredach P.; Li, Mingyao

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network SpaGCN: 整合基因表达，空间位置和组织学，通过图形卷积网络识别空间域和空间可变基因

NATURE METHODS

IF32.1

2021-10-28

321

OAAI

Hu, Jian; Li, Xiangjie; Coleman, Kyle; Schroeder, Amelia; Ma, Nan; Irwin, David J.; Lee, Edward B.; Shinohara, Russell T.; Li, Mingyao

Global geographic patterns of heterospecific pollen receipt help uncover potential ecological and evolutionary impacts across plant communities worldwide

SCIENTIFIC REPORTS

IF3.9

2019-05-30

OAAI

Arceo-Gomez, Gerardo; Schroeder, Amelia; Albor, Cristopher; Ashman, Tia-Lynn; Knight, Tiffany M.; Bennett, Joanne M.; Suarez, Brian; Parra-Tabla, Victor

Comparison of Machine Learning Algorithms for Predictive Modeling of Beef Attributes Using Rapid Evaporative Ionization Mass Spectrometry (REIMS) Data

SCIENTIFIC REPORTS

IF3.9

2019-04-05

OAAI

Gredell, Devin A.; Schroeder, Amelia R.; Belk, Keith E.; Broeckling, Corey D.; Heuberger, Adam L.; Kim, Soo-Young; King, D. Andy; Shackelford, Steven D.; Sharp, Julia L.; Wheeler, Tommy L.; Woerner, Dale R.; Prenni, Jessica E.

研究方向