W. James Kent - Publications, H-index & Citations

W. James Kent

University of California System

45H指数

96论文数

7.7W被引数

收录论文 27

发表时间

The UCSC Genome Browser database: 2024 update

NUCLEIC ACIDS RESEARCH

IF13.1

2023-11-11

OAAI

Raney, Brian J.; Barber, Galt P.; Benet-Pages, Anna; Casper, Jonathan; Clawson, Hiram; Cline, Melissa S.; Diekhans, Mark; Fischer, Clayton; Gonzalez, Jairo Navarro; Hickey, Glenn; Hinrichs, Angie S.; Kuhn, Robert M.; Lee, Brian T.; Lee, Christopher M.; Le Mercier, Phillipe; Miga, KarenH; Nassar, Luis R.; Nejad, Parisa; Paten, Benedict; Perez, Gerardo; Schmelter, Daniel; Speir, Matthew L.; Wick, Brittney D.; Zweig, Ann S.; Haussler, David; Kent, W. James; Haeussler, Maximilian

GenArk: towards a million UCSC genome browsers

GENOME BIOLOGY

IF9.4

2023-10-02

OAAI

Clawson, Hiram; Lee, Brian T.; Raney, Brian J.; Barber, Galt P.; Casper, Jonathan; Diekhans, Mark; Fischer, Clay; Gonzalez, Jairo Navarro; Hinrichs, Angie S.; Lee, Christopher M.; Nassar, Luis R.; Perez, Gerardo; Wick, Brittney; Schmelter, Daniel; Speir, Matthew L.; Armstrong, Joel; Zweig, Ann S.; Kuhn, Robert M.; Kirilenko, Bogdan M.; Hiller, Michael; Haussler, David; Kent, W. James; Haeussler, Maximilian

The UCSC Genome Browser database: 2023 update

NUCLEIC ACIDS RESEARCH

IF13.1

2022-11-24

202

OAAI

Nassar, Luis R.; Barber, Galt P.; Benet-Pages, Anna; Casper, Jonathan; Clawson, Hiram; Diekhans, Mark; Fischer, Clay; Gonzalez, Jairo Navarro; Hinrichs, Angie S.; Lee, Brian T.; Lee, Christopher M.; Muthuraman, Pranav; Nguy, Beagan; Pereira, Tiana; Nejad, Parisa; Perez, Gerardo; Raney, Brian J.; Schmelter, Daniel; Speir, Matthew L.; Wick, Brittney D.; Zweig, Ann S.; Haussler, David; Kuhn, Robert M.; Haeussler, Maximilian; Kent, W. James

The UCSC Genome Browser database: 2022 update

NUCLEIC ACIDS RESEARCH

IF13.1

2021-10-28

162

OAAI

Lee, Brian T.; Barber, Galt P.; Benet-Pages, Anna; Casper, Jonathan; Clawson, Hiram; Diekhans, Mark; Fischer, Clay; Gonzalez, Jairo Navarro; Hinrichs, Angie S.; Lee, Christopher M.; Muthuraman, Pranav; Nassar, Luis R.; Nguy, Beagan; Pereira, Tiana; Perez, Gerardo; Raney, Brian J.; Rosenbloom, Kate R.; Schmelter, Daniel; Speir, Matthew L.; Wick, Brittney D.; Zweig, Ann S.; Haussler, David; Kuhn, Robert M.; Haeussler, Maximilian; Kent, W. James

The UCSC Genome Browser database: 2021 update

NUCLEIC ACIDS RESEARCH

IF13.1

2020-11-22

321

OAAI

Gonzalez, Jairo Navarro; Zweig, Ann S.; Speir, Matthew L.; Schmelter, Daniel; Rosenbloom, Kate R.; Raney, Brian J.; Powell, Conner C.; Nassar, Luis R.; Maulding, Nathan D.; Lee, Christopher M.; Lee, Brian T.; Hinrichs, Angie S.; Fyfe, Alastair C.; Fernandes, Jason D.; Diekhans, Mark; Clawson, Hiram; Casper, Jonathan; Benet-Pages, Anna; Barber, Galt P.; Haussler, David; Kuhn, Robert M.; Haeussler, Maximilian; Kent, W. James

The UCSC Genome Browser database: 2019 update

NUCLEIC ACIDS RESEARCH

IF13.1

2018-11-08

592

OAAI

Haeussler, Maximilian; Zweig, Ann S.; Tyner, Cath; Speir, Matthew L.; Rosenbloom, Kate R.; Raney, Brian J.; Lee, Christopher M.; Lee, Brian T.; Hinrichs, Angie S.; Gonzalez, Jairo Navarro; Gibson, David; Diekhans, Mark; Clawson, Hiram; Casper, Jonathan; Barber, Galt P.; Haussler, David; Kuhn, Robert M.; Kent, W. James

The UCSC Genome Browser database: 2018 update

NUCLEIC ACIDS RESEARCH

IF13.1

2017-11-02

377

OAAI

Casper, Jonathan; Zweig, Ann S.; Villarreal, Chris; Tyner, Cath; Speir, Matthew L.; Rosenbloom, Kate R.; Raney, Brian J.; Lee, Christopher M.; Lee, Brian T.; Karolchik, Donna; Hinrichs, Angie S.; Haeussler, Maximilian; Guruvadoo, Luvina; Gonzalez, Jairo Navarro; Gibson, David; Fiddes, Ian T.; Eisenhart, Christopher; Diekhans, Mark; Clawson, Hiram; Barber, Galt P.; Armstrong, Joel; Haussler, David; Kuhn, Robert M.; Kent, W. James

The UCSC Genome Browser database: 2017 update

NUCLEIC ACIDS RESEARCH

IF13.1

2016-01-01

289

OAAI

Tyner, Cath; Barber, Galt P.; Casper, Jonathan; Clawson, Hiram; Diekhans, Mark; Eisenhart, Christopher; Fischer, Clayton M.; Gibson, David; Gonzalez, Jairo Navarro; Guruvadoo, Luvina; Haeussler, Maximilian; Heitner, Steve; Hinrichs, Angie S.; Karolchik, Donna; Lee, Brian T.; Lee, Christopher M.; Nejad, Parisa; Raney, Brian J.; Rosenbloom, Kate R.; Speir, Matthew L.; Villarreal, Chris; Vivian, John; Zweig, Ann S.; Haussler, David; Kuhn, Robert M.; Kent, W. James

The UCSC Genome Browser database: 2016 update

NUCLEIC ACIDS RESEARCH

IF13.1

2015-11-20

335

OAAI

Speir, Matthew L.; Zweig, Ann S.; Rosenbloom, Kate R.; Raney, Brian J.; Paten, Benedict; Nejad, Parisa; Lee, Brian T.; Learned, Katrina; Karolchik, Donna; Hinrichs, Angie S.; Heitner, Steve; Harte, Rachel A.; Haeussler, Maximilian; Guruvadoo, Luvina; Fujita, Pauline A.; Eisenhart, Christopher; Diekhans, Mark; Clawson, Hiram; Casper, Jonathan; Barber, Galt P.; Haussler, David; Kuhn, Robert M.; Kent, W. James

Utilizing mapping targets of sequences underrepresented in the reference assembly to reduce false positive alignments

NUCLEIC ACIDS RESEARCH

IF13.1

2015-07-10

OAAI

Miga, Karen H.; Eisenhart, Christopher; Kent, W. James

The UCSC Genome Browser database: update 2010

NUCLEIC ACIDS RESEARCH

IF13.1

2009-11-11

565

OAAI

Rhead, Brooke; Karolchik, Donna; Kuhn, Robert M.; Hinrichs, Angie S.; Zweig, Ann S.; Fujita, Pauline A.; Diekhans, Mark; Smith, Kayla E.; Rosenbloom, Kate R.; Raney, Brian J.; Pohl, Andy; Pheasant, Michael; Meyer, Laurence R.; Learned, Katrina; Hsu, Fan; Hillman-Jackson, Jennifer; Harte, Rachel A.; Giardine, Belinda; Dreszer, Timothy R.; Clawson, Hiram; Barber, Galt P.; Haussler, David; Kent, W. James

Understanding genome browsing

NATURE BIOTECHNOLOGY

IF41.7

2009-02-01

PREAI

Cline, Melissa S.; Kent, W. James

UCSC genome browser tutorial

GENOMICS

IF3

2008-08-01

OAAI

Zweig, Ann S.; Karolchik, Donna; Kuhn, Robert M.; Haussler, David; Kent, W. James

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

GENOME RESEARCH

IF5.5

2007-06-13

190

OAAI

Margulies, Elliott H.; Cooper, Gregory M.; Asimenos, George; Thomas, Daryl J.; Dewey, Colin N.; Siepel, Adam; Birney, Ewan; Keefe, Damian; Schwartz, Ariel S.; Hou, Minmei; Taylor, James; Nikolaev, Sergey; Montoya-Burgos, Juan I.; Loytynoja, Ari; Whelan, Simon; Pardi, Fabio; Massingham, Tim; Brown, James B.; Bickel, Peter; Holmes, Ian; Mullikin, James C.; Ureta-Vidal, Abel; Paten, Benedict; Stone, Eric A.; Rosenbloom, Kate R.; Kent, W. James; Antonarakis, Stylianos E.; Batzoglou, Serafim; Goldman, Nick; Hardison, Ross; Haussler, David; Miller, Webb; Pachter, Lior; Green, Eric D.; Sidow, Arend

The ENCODE project at UC Santa Cruz

NUCLEIC ACIDS RESEARCH

IF13.1

2007-01-03

OAAI

Thomas, Daryl J.; Rosenbloom, Kate R.; Clawson, Hiram; Hinrichs, Angie S.; Trumbower, Heather; Raney, Brian J.; Karolchik, Donna; Barber, Galt P.; Harte, Rachel A.; Hillman-Jackson, Jennifer; Kuhn, Robert M.; Rhead, Brooke L.; Smith, Kayla E.; Thakkapallayil, Archana; Zweig, Ann S.; Haussler, David; Kent, W. James

Variation resources at UC Santa Cruz

NUCLEIC ACIDS RESEARCH

IF13.1

2007-01-03

OAAI

Thomas, Daryl J.; Trumbower, Heather; Kern, Andrew D.; Rhead, Brooke L.; Kuhn, Robert M.; Haussler, David; Kent, W. James

The UCSC Genome Browser Database: Update 2007

NUCLEIC ACIDS RESEARCH

IF13.1

2007-01-03

263

OAAI

Kuhn, R. M.; Karolchik, D.; Zweig, A. S.; Trumbower, H.; Thomas, D. J.; Thakkapallayil, A.; Sugnet, C. W.; Stanke, M.; Smith, K. E.; Siepel, A.; Rosenbloom, K. R.; Rhead, B.; Raney, B. J.; Pohl, A.; Pedersen, J. S.; Hsu, F.; Hinrichs, A. S.; Harte, R. A.; Diekhans, M.; Clawson, H.; Bejerano, G.; Barber, G. P.; Baertsch, R.; Haussler, D.; Kent, W. J.

Reconstructing contiguous regions of an ancestral genome

GENOME RESEARCH

IF5.5

2006-09-18

235

OAAI

Ma, Jian; Zhang, Louxin; Suh, Bernard B.; Raney, Brian J.; Burhans, Richard C.; Kent, W. James; Blanchette, Mathieu; Haussler, David; Miller, Webb

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes 脊椎动物，昆虫，蠕虫和酵母基因组中的进化保守元素

GENOME RESEARCH

IF5.5

2005-07-15

3.4K

OAAI

Siepel, A; Bejerano, G; Pedersen, JS; Hinrichs, AS; Hou, MM; Rosenbloom, K; Clawson, H; Spieth, J; Hillier, LW; Richards, S; Weinstock, GM; Wilson, RK; Gibbs, RA; Kent, WJ; Miller, W; Haussler, D

Exploring relationships and mining data with the UCSC Gene Sorter

GENOME RESEARCH

IF5.5

2005-05-02

OAAI

Kent, WJ; Hsu, F; Karolchik, D; Kuhn, RM; Clawson, H; Trumbower, H; Haussler, D

研究方向