Miroslav Krepl

Transcriptome-scale analysis uncovers conserved residues in the hydrophobic core of the bacterial RNA chaperone Hfq required for small regulatory RNA stability

IF5.5

2025-12-010

PRE

转录组规模分析揭示了细菌RNA解旋酶Hfq疏水核心中维持小调控RNA稳定性的保守残基

Can We Ever Develop an Ideal RNA Force Field? Lessons Learned from Simulations of the UUCG RNA Tetraloop and Other Systems

IF13.1

2025-01-271

我们能开发出理想的RNA力场吗？从UUCG RNA四环和其他系统的模拟中吸取的经验教训

How Binding Site Flexibility Promotes RNA Scanning by TbRGG2 RRM: A Molecular Dynamics Simulation Study

IF5.5

2025-01-150

OAAI

结合位点的灵活性如何促进TbRGG2 RRM的RNA扫描: 分子动力学模拟研究

The Drosophila RNA binding protein Hrp48 binds a specific RNA sequence of the msl-2 mRNA 3' UTR to regulate translation

IF5.3

2025-01-130

OAAI

果蝇RNA结合蛋白Hrp48结合msl-2 mRNA 3'utr的特定RNA序列以调节翻译

BIOPHYSICAL CHEMISTRY

IF2.2

2025-01-012

OAAI

N-terminal domain of polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition

Comprehensive Assessment of Force-Field Performance in Molecular Dynamics Simulations of DNA/RNA Hybrid Duplexes

IF13.1

2024-08-241

OAAI

DNA/RNA杂交双链体分子动力学模拟中力场性能的综合评估

Structure of an internal loop motif with three consecutive U•U mismatches from stem-loop 1 in the 3′-UTR of the SARS-CoV-2 genomic RNA

IF5.5

2024-07-166

OAAI

Mechanical Stability and Unfolding Pathways of Parallel Tetrameric G-Quadruplexes Probed by Pulling Simulations

IF13.1

2024-05-232

OAAI

通过拉动模拟探测的平行四聚体G-四链体的机械稳定性和展开途径

Simple Adjustment of Intranucleotide Base-Phosphate Interaction in the OL3 AMBER Force Field Improves RNA Simulations

IF5.3

2024-04-170

OAAI

OL3琥珀力场中核苷酸内碱基-磷酸相互作用的简单调整改善了RNA模拟

Complexity of Guanine Quadruplex Unfolding Pathways Revealed by Atomistic Pulling Simulations

IF5.5

2023-11-0911

OAAI

原子拉动模拟揭示的鸟嘌呤四链体展开途径的复杂性

Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations

IF5.3

2023-07-172

OAAI

通过分子模拟获得的DNA霍利迪结的开闭动力学的原子图

Structural and dynamic effects of pseudouridine modifications on noncanonical interactions in RNA

IF5.3

2023-04-266

OAAI

RNA

IF5

2023-03-035

OAAI

Spontaneous binding of single-stranded RNAs to RRM proteins visualized by unbiased atomistic simulations with a rescaled RNA force field

Automatic Learning of Hydrogen-Bond Fixes in the AMBER RNA Force Field

IF13.1

2022-12-018

OAAI

琥珀RNA力场中氢键修复的自动学习