Veniamin Fishman - Publications, H-index & Citations

Veniamin Fishman

sirius institute of science and technology

22H指数

129论文数

1.4K被引数

收录论文 29

发表时间

Insertion-Site Proximity to AAV Inverted Terminal Repeats Increases Plasmid Recombination 插入位点靠近AAV反向末端重复序列可增加质粒重组

International Journal of Molecular Sciences

IF4.9

2026-08-27

OAAI

Maxim Makarenko; Daria Semicheva; Veniamin Fishman

HMGB1 regulates mitochondrial structure and reactive oxygen species balance during the transition from naïve to primed pluripotency HMGB1调控从原始态到预定态多能性转变过程中的线粒体结构与活性氧平衡

Frontiers in Cell and Developmental Biology

IF4.3

2026-05-12

OAAI

TY Tatiana Y. Starkova; SV Sergey V. Ponomartsev; VS Veniamin S. Fishman; NR Nariman R. Battulin; ND Nikolay D. Aksenov; EI Evgeny I. Bakhmet; AA Andrey A. Kuzmin; DS Dmitry S. Bogolyubov; SA Sergey A. Sinenko; AN Alexey N. Tomilin

The 3D genomics of lampbrush chromosomes highlights the role of active transcription in chromatin organization 灯刷染色体的三维基因组学突出了活性转录在染色质组织中的作用

Nucleic Acids Research

IF13.1

2026-04-13

OAAI

Timofey Lagunov; Maria Gridina; Artem Nurislamov; Tatiana Kulikova; Antonina Maslova; Viktor Konstantinov; Andrey Popov; Alla Krasikova; Veniamin Fishman; null

An Exceptionally Complex Chromosome Rearrangement in the Great Tit (Parus Major): Genetic Composition, Meiotic Behavior and Population Frequency 一种极其复杂的山雀（Parus major）染色体重排：遗传组成、减数分裂行为及种群频率

Cells 2026, Vol. 15, Page 52

IF5.2

2025-12-27

OAAI

Anna Torgasheva; Lyubov Malinovskaya; Miroslav Nuriddinov; Kira S. Zadesenets; Maria Gridina; Artem Nurislamov; Svetlana Korableva; Inna Pristyazhnyuk; Anastasiya Proskuryakova; Katerina V. Tishakova; Nikolay B. Rubtsov; Veniamin S. Fishman; Pavel Borodin

Chromatin landscape, transcriptomic and ChIP-seq profiling of Anopheles stephensi MSQ43 cell line 染色质景观、转录组学和ChIP-seq分析安氏按蚊MSQ43细胞系

Scientific Data

IF6.9

2025-09-26

OAAI

Varvara Lukyanchikova; Miroslav Nuriddinov; Anna Khabarova; Maria Gridina; Andrey Popov; Polina Belokopytova; Igor V. Sharakhov; Veniamin Fishman

Charm is a flexible pipeline to simulate chromosomal rearrangements on Hi-C-like data Charm是一个灵活的流水线，用于在Hi-C-like数据上模拟染色体重排。

NAR GENOMICS AND BIOINFORMATICS

IF2.8

2025-06-01

OAAI

Nuriddinov, Miroslav; Belokopytova, Polina; Fishman, Veniamin

Combining chromosome conformation capture and exome sequencing for simultaneous detection of structural and single-nucleotide variants 结合染色体构象捕获和外显子测序，以同时检测结构变异和单核苷酸变异

GENOME MEDICINE

IF11.2

2025-05-07

OAAI

Gridina, Maria; Lagunov, Timofey; Belokopytova, Polina; Torgunakov, Nikita; Nuriddinov, Miroslav; Nurislamov, Artem; Nazarenko, Lyudmila P.; Kashevarova, Anna A.; Lopatkina, Maria E.; Vasilyev, Stanislav; Zuev, Andrey; Belyaeva, Elena O.; Salyukova, Olga A.; Cheremnykh, Aleksandr D.; Sukhanova, Natalia N.; Minzhenkova, Marina E.; Markova, Zhanna G.; Demina, Nina A.; Stepanchuk, Yana; Khabarova, Anna; Yan, Alexandra; Valeev, Emil; Koksharova, Galina; Grigor'eva, Elena V.; Kokh, Natalia; Lukjanova, Tatiana; Maximova, Yulia; Musatova, Elizaveta; Shabanova, Elena; Kechin, Andrey; Khrapov, Evgeniy; Boyarskih, Uliana; Ryzhkova, Oxana; Suntsova, Maria; Matrosova, Alina; Karoli, Mikhail; Manakhov, Andrey; Filipenko, Maxim; Rogaev, Evgeny; Shilova, Nadezhda V.; Lebedev, Igor N.; Fishman, Veniamin

Structural variants in the Epb41l4a locus: TAD disruption and Nrep gene misregulation as hypothetical drivers of neurodevelopmental outcomes

SCIENTIFIC REPORTS

IF3.9

2024-03-04

OAAI

Salnikov, Paul; Korablev, Alexey; Serova, Irina; Belokopytova, Polina; Yan, Aleksandra; Stepanchuk, Yana; Tikhomirov, Savelii; Fishman, Veniamin

Cell type-specific interpretation of noncoding variants using deep learning-based methods

GIGASCIENCE

IF3.9

2023-03-27

OAAI

Sindeeva, Maria; Chekanov, Nikolay; Avetisian, Manvel; Shashkova, Tatiana I.; Baranov, Nikita; Malkin, Elian; Lapin, Alexander; Kardymon, Olga; Fishman, Veniamin

Lampbrush chromosome studies in the post-genomic era

BIOESSAYS

IF2.7

2023-02-28

PREAI

Krasikova, Alla; Fishman, Veniamin; Kulikova, Tatiana

Annotation of uORFs in the OMIM genes allows to reveal pathogenic variants in 5′UTRs

NUCLEIC ACIDS RESEARCH

IF13.1

2023-01-18

OAAI

Filatova, Alexandra; Reveguk, Ivan; Piatkova, Maria; Bessonova, Daria; Kuziakova, Olga; Demakova, Victoria; Romanishin, Alexander; Fishman, Veniamin; Imanmalik, Yerzhan; Chekanov, Nikolay; Skitchenko, Rostislav; Barbitoff, Yury; Kardymon, Olga; Skoblov, Mikhail

Method for the Isolation of RNA-seq-Quality RNA from Human Intervertebral Discs after Mortar and Pestle Homogenization

CELLS

IF5.2

2022-11-11

OAAI

Ivanov, Artemii A.; Leonova, Olga N.; Wiebe, Daniil S.; Krutko, Alexsandr, V; Gridina, Mariya M.; Fishman, Veniamin S.; Aulchenko, Yurii S.; Tsepilov, Yakov A.; Golubeva, Tatiana S.

3DGenBench: a web-server to benchmark computational models for 3D Genomics

NUCLEIC ACIDS RESEARCH

IF13.1

2022-05-25

OAAI

Belokopytova, Polina; Viesna, Emil; Chilinski, Mateusz; Qi, Yifeng; Salari, Hossein; Di Stefano, Marco; Esposito, Andrea; Conte, Mattia; Chiariello, Andrea M.; Teif, Vladimir B.; Plewczynski, Dariusz; Zhang, Bin; Jost, Daniel; Fishman, Veniamin

Anopheles mosquitoes reveal new principles of 3D genome organization in insects

NATURE COMMUNICATIONS

IF15.7

2022-04-12

OAAI

Lukyanchikova, Varvara; Nuriddinov, Miroslav; Belokopytova, Polina; Taskina, Alena; Liang, Jiangtao; Reijnders, Maarten J. M. F.; Ruzzante, Livio; Feron, Romain; Waterhouse, Robert M.; Wu, Yang; Mao, Chunhong; Tu, Zhijian; Sharakhov, Igor, V; Fishman, Veniamin

A cookbook for DNase Hi-C

EPIGENETICS & CHROMATIN

IF3.5

2021-03-20

OAAI

Gridina, Maria; Mozheiko, Evgeniy; Valeev, Emil; Nazarenko, Ludmila P.; Lopatkina, Maria E.; Markova, Zhanna G.; Yablonskaya, Maria I.; Voinova, Viktoria Yu; Shilova, Nadezhda V.; Lebedev, Igor N.; Fishman, Veniamin

Erythrocytes 3D genome organization in vertebrates

SCIENTIFIC REPORTS

IF3.9

2021-02-24

OAAI

Ryzhkova, Anastasia; Taskina, Alena; Khabarova, Anna; Fishman, Veniamin; Battulin, Nariman

The Mutation Spectrum of Maturity Onset Diabetes of the Young (MODY)-Associated Genes among Western Siberia Patients

JOURNAL OF PERSONALIZED MEDICINE

IF3

2021-01-18

OAAI

Ivanoshchuk, Dinara E.; Shakhtshneider, Elena V.; Rymar, Oksana D.; Ovsyannikova, Alla K.; Mikhailova, Svetlana V.; Fishman, Veniamin S.; Valeev, Emil S.; Orlov, Pavel S.; Voevoda, Mikhail I.

Quantitative prediction of enhancer-promoter interactions

GENOME RESEARCH

IF5.5

2019-12-02

OAAI

Belokopytova, Polina S.; Nuriddinov, Miroslav A.; Mozheiko, Evgeniy A.; Fishman, Daniil; Fishman, Veniamin

DNA barcoding reveals that injected transgenes are predominantly processed by homologous recombination in mouse zygote

NUCLEIC ACIDS RESEARCH

IF13.1

2019-11-19

OAAI

Smirnov, Alexander; Fishman, Veniamin; Yunusova, Anastasia; Korablev, Alexey; Serova, Irina; Skryabin, Boris, V; Rozhdestvensky, Timofey S.; Battulin, Nariman

Time origin and structural analysis of the induced CRISPR/cas9 megabase-sized deletions and duplications involving the Cntn6 gene in mice

SCIENTIFIC REPORTS

IF3.9

2019-10-02

OAAI

Pristyazhnyuk, Inna E.; Minina, Julia; Korablev, Alexey; Serova, Irina; Fishman, Veniamin; Gridina, Maria; Rozhdestvensky, Timofey S.; Gubar, Leonid; Skryabin, Boris V.; Serov, Oleg L.

研究方向