Khanh Dao Duc - Publications, H-index & Citations

Khanh Dao Duc

University of British Columbia

13H指数

85论文数

798被引数

收录论文 16

发表时间

Fast and interpretable quantification of biological shape heterogeneity via stratified Wasserstein kernel 分层Wasserstein核的快速可解释生物形状异质性量化

PLoS Computational Biology

IF3.6

2026-05-01

PREAI

Zhao, Wenjun; Sutherland, Danica J.; Dao Duc, Khanh

Advanced coarse-grained model for fast simulation of nascent polypeptide chain dynamics within the ribosome 用于快速模拟核糖体内新生多肽链动力学的先进粗粒化模型

Biophysical Journal

IF3.1

2025-11-05

PREAI

Shiqi Yu; Artem Kushner; Ella Teasell; Wenjun Zhao; Simcha Srebnik; Khanh Dao, Duc

Transport-based transfer learning on Electronic Health Records: application to detection of treatment disparities 基于电子健康记录的交通转移学习：在治疗差异检测中的应用

JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

IF4.6

2025-09-01

OAAI

Li, Wanxin; Ahmed, Saad; Park, Yongjin P.; Duc, Khanh Dao

A comprehensive survey and benchmark of deep learning-based methods for atomic model building from cryo-electron microscopy density maps 基于冷冻电子显微镜密度图进行原子模型构建的深度学习方法综合调研与基准评测

BRIEFINGS IN BIOINFORMATICS

IF7.7

2025-07-01

OAAI

Zhang, Chenwei; Condon, Anne; Duc, Khanh Dao

InstaMap: instant-NGP for cryo-EM density maps InstaMap：用于冷冻电镜密度图的instant-NGP

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY

IF3.8

2025-03-26

OAAI

Woollard, G; Zhou, WD; Thiede, EH; Lin, C; Grigorieff, N; Cossio, P; Duc, KD; Hanson, SM

Optimal control of ribosome population for gene expression under periodic nutrient intake

JOURNAL OF THE ROYAL SOCIETY INTERFACE

IF3.5

2024-03-06

OAAI

Soubrier, Clement; Foxall, Eric; Ciandrini, Luca; Dao Duc, Khanh

AlignOT: An Optimal Transport Based Algorithm for Fast 3D Alignment With Applications to Cryogenic Electron Microscopy Density Maps

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS

IF3.4

2023-11-01

OAAI

Riahi, Aryan Tajmir; Woollard, Geoffrey; Poitevin, Frederic; Condon, Anne; Duc, Khanh Dao

Geometric differences in the ribosome exit tunnel impact the escape of small nascent proteins

BIOPHYSICAL JOURNAL

IF3.1

2023-01-01

OAAI

Yu, Shiqi; Srebnik, Simcha; Duc, Khanh Dao

RiboXYZ: a comprehensive database for visualizing and analyzing ribosome structures

NUCLEIC ACIDS RESEARCH

IF13.1

2022-10-28

OAAI

Kushner, Artem; Petrov, Anton S.; Dao Duc, Khanh

FMRP-dependent production of large dosage-sensitive proteins is highly conserved

GENETICS

IF5.1

2022-06-22

OAAI

Flanagan, Keegan; Baradaran-Heravi, Alireza; Yin, Qi; Duc, Khanh Dao; Spradling, Allan C.; Greenblatt, Ethan J.

EGGTART: A tool to visualize the dynamics of biophysical transport under the inhomogeneous l-TASEP

BIOPHYSICAL JOURNAL

IF3.1

2021-04-01

OAAI

Erdmann-Pham, Dan D.; Son, Wonjun; Duc, Khanh Dao; Song, Yun S.

Structural Heterogeneities of the Ribosome: New Frontiers and Opportunities for Cryo-EM 核糖体的结构异质性: cryo-em的新领域和机遇

MOLECULES

IF4.6

2020-09-17

OAAI

Poitevin, Frederic; Kushner, Artem; Li, Xinpei; Dao Duc, Khanh

Differences in the path to exit the ribosome across the three domains of life

NUCLEIC ACIDS RESEARCH

IF13.1

2019-02-26

OAAI

Khanh Dao Duc; Batra, Sanjit S.; Bhattacharya, Nicholas; Cate, Jamie H. D.; Song, Yun S.

The impact of ribosomal interference, codon usage, and exit tunnel interactions on translation elongation rate variation (vol 14, e1007166, 2018)

PLOS GENETICS

IF3.7

2018-08-24

OAAI

Khanh Dao Duc; Song, Yun S.

The impact of ribosomal interference, codon usage, and exit tunnel interactions on translation elongation rate variation

PLOS GENETICS

IF3.7

2018-01-16

OAAI

Duc, Khanh Dao; Song, Yun S.

The Length of the Shortest Telomere as the Major Determinant of the Onset of Replicative Senescence

GENETICS

IF5.1

2013-08-01

OAAI

Xu, Zhou; Khanh Dao Duc; Holcman, David; Teixeira, Maria Teresa

研究方向