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Yun S. Song

University of California

52H指数
314论文数
1.4W被引数
收录论文 82
发表时间
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Predicting genome-wide functional constraints with GPN-Star使用GPN-Star预测全基因组功能约束
errNature
IF48.5
err2026-09-09
err0
errOAAI
errChengzhong Ye; Gonzalo Benegas; Carlos Albors; Jianan Canal Li; Sebastian Prillo; Peter D. Fields; Brian Clarke; Yun S. Song
err分享
err收藏
Hypervariable loop profiling decodes sequence determinants of antibody stability超变环分析解码抗体稳定性的序列决定因素
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2026-04-30
err0
PREAI
errYue Wan; Jiahao Liang; Yile Dai; Karthik Srinivasan; Christian Billesbølle; Ju-Fen Zhu; Jung-Eun Shin; Steffanie Paul; Debora Marks; Yun S. Song; Benjamin R. Myers; Antoine Koehl; Aashish Manglik
err分享
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Mapping cis-regulatory mutations at scale in sorghum enables modulation of gene expression在高粱中大规模绘制顺式调控突变可以调节基因表达
errNature Biotechnology
IF41.7
err2026-03-27
err0
errOAAI
errEvan D. Groover; David Ding; Flora Z. Wang; Gonzalo Benegas; Joseph Rivera; Shahar Schwartz; Stephen Chen; Michael F. Moubarak; Viktoriya Georgieva; Peggy G. Lemaux; Brian J. Staskawicz; Krishna K. Niyogi; Yun S. Song; David F. Savage
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Nucleotide context models outperform protein language models for predicting antibody affinity maturation核苷酸上下文模型在预测抗体亲和力成熟方面优于蛋白质语言模型
errPLOS COMPUTATIONAL BIOLOGY
IF3.6
err2025-12-01
err0
PREAI
errJohnson, Mackenzie M.; Sung, Kevin; Haddox, Hugh K.; Vora, Ashni A.; Araki, Tatsuya; Victora, Gabriel D.; Song, Yun S.; Fukuyama, Julia; Matsen Iv, Frederick A.
err分享
err收藏
Moronic acid alleviates non-alcoholic fatty liver disease and fibrosis through PPARs-mediated lipidomic reprogramming莫罗尼酸通过PPARs介导的脂质组重编程减轻非酒精性脂肪肝和纤维化
errPhytomedicine
IF8.3
err2025-11-07
err0
PREAI
errJinlu Han; Jiong Chen; Hong Hu; Yun Song; Mengyan Chen; De Zhao; Wen Shan; Qinghui Zhang; Ling Xu
err分享
err收藏
Author Correction: Robust and accurate Bayesian inference of genome-wide genealogies for hundreds of genomes作者更正：针对数百个基因组的高鲁棒性和高精度贝叶斯推断的全基因组谱系构建
errNature Genetics
IF29
err2025-10-10
err0
errOAAI
errYun Deng; Rasmus Nielsen; Yun S. Song
err分享
err收藏
Robust and adaptive non-parametric tests for detecting general distributional shifts in gene expression稳健且自适应的非参数检验方法，用于检测基因表达中的广义分布偏移
errCell Reports Methods
IF4.5
err2025-09-02
err0
errOAAI
errFanding Zhou; Alan J. Aw; Dan D. Erdmann-Pham; Jonathan Fischer; Yun S. Song
err分享
err收藏
ConvexML: Fast and Accurate Branch Length Estimation under Irreversible Mutation Models, Illustrated through Applications to CRISPR/Cas9-Based Lineage TracingConvexML：在不可逆突变模型下实现快速且准确的分支长度估计，并通过CRISPR/Cas9基线系追踪的应用进行说明
errSYSTEMATIC BIOLOGY
IF5.7
err2025-09-01
err1
PREAI
errPrillo, Sebastian; Ravoor, Akshay; Yosef, Nir; Song, Yun S.
err分享
err收藏
Learning antibody sequence constraints from allelic inclusion从等位基因包含中学习抗体序列约束
errCell Systems
IF7.7
err2025-08-13
err0
PREAI
errMilind Jagota; Chloe Hsu; Thomas Mazumder; Kevin Sung; William S. DeWitt; Jennifer Listgarten; Frederick A. Matsen IV; Chun Jimmie Ye; Yun S. Song
err分享
err收藏
Dynamic covalent interaction induced formation of a bortezomib–andrographolide complex and construction of the dual-drug delivery system动态共价相互作用诱导的硼替佐米–穿心莲内酯复合物形成及双药递送系统的构建
errRSC Adv.
IF4.6
err2025-08-13
err0
errOAAI
errShihui Qiao †; Hui Long †; Yun Song †; Xu Dong †; Huamin Zhong; Huanfeng Meng; Jingwen Gong; Yong Wang; Yiheng Liu; Haiying Zhang
err分享
err收藏
A Sitewise Model of Natural Selection on Individual Antibodies via a Transformer-Encoder通过Transformer-Encoder实现的针对单个抗体的位点模型自然选择
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2025-08-01
err0
errOAAI
errMatsen IV, Frederick A.; Sung, Kevin; Johnson, Mackenzie M.; Dumm, Will; Rich, David; Starr, Tyler N.; Song, Yun S.; Bradley, Philip; Fukuyama, Julia; Haddox, Hugh K.
err分享
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Exact and efficient phylodynamic simulation from arbitrarily large populations从任意大规模群体中进行的精确且高效的谱系动力学模拟
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2025-05-14
err0
errOAAI
errCelentano, Michael; Dewitt, William S.; Prillo, Sebastian; Song, Yun S.
err分享
err收藏
Active telomere elongation by a subclass of cancer-associated POT1 mutations由一类与癌症相关的POT1突变引起的端粒主动延长
errGENES & DEVELOPMENT
IF7.7
err2025-02-27
err0
errOAAI
errMartin, Annika; Schabort, Johannes; Bartke-Croughan, Rebecca; Tran, Stella; Preetham, Atul; Lu, Robert; Ho, Richard; Gao, Jianpu; Jenkins, Shirin; Boyle, John; Ghanim, George E.; Jagota, Milind; Song, Yun S.; Li, Hanqin; Hockemeyer, Dirk
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The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles ( vol 24 , 79 , 2023)ENCODE 插补挑战：对跨细胞类型表观基因组谱插补方法的关键评估（卷 24，79，2023）
errGENOME BIOLOGY
IF9.4
err2025-02-13
err0
errOAAI
errSchreiber, Jacob Matthew; Boix, Carles A.; Lee, Jin Wook; Li, Hongyang; Guan, Yuanfang; Chang, Chun-Chieh; Chang, Jen-Chien; Hawkins-Hooker, Alex; Schoelkopf, Bernhard; Schweikert, Gabriele; Carulla, Mateo Rojas; Canakoglu, Arif; Guzzo, Francesco; Nanni, Luca; Masseroli, Marco; Carman, Mark James; Pinoli, Pietro; Hong, Chenyang; Yip, Kevin Y.; Spence, Jefrey P.; Batra, Sanjit Singh; Song, Yun S.; Mahony, Shaun; Zhang, Zheng; Tan, Wuwei; Shen, Yang; Sun, Yuanfei; Shi, Minyi; Adrian, Jessika; Sandstrom, Richard S.; Farrell, Nina P.; Halow, Jessica M.; Lee, Kristen; Jiang, Lixia; Yang, Xinqiong; Epstein, Charles B.; Strattan, J. Seth; Bernstein, Bradley E.; Snyder, Michael P.; Kellis, Manolis; Noble, William S.; Kundaje, Anshul Bharat; ENCODE Imputat Challenge Participants
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A previously reported bottleneck in human ancestry 900 kya is likely a statistical artifact
errGENETICS
IF5.1
err2024-12-16
err1
errOAAI
errDeng, Yun; Nielsen, Rasmus; Song, Yun S.
err分享
err收藏
Assessing predictions on fitness effects of missense variants in HMBS in CAGI6
errHUMAN GENETICS
IF3.6
err2024-08-07
err0
PREAI
errZhang, Jing; Kinch, Lisa; Katsonis, Panagiotis; Lichtarge, Olivier; Jagota, Milind; Song, Yun S.; Sun, Yuanfei; Shen, Yang; Kuru, Nurdan; Dereli, Onur; Adebali, Ogun; Alladin, Muttaqi Ahmad; Pal, Debnath; Capriotti, Emidio; Turina, Maria Paola; Savojardo, Castrense; Martelli, Pier Luigi; Babbi, Giulia; Casadio, Rita; Pucci, Fabrizio; Rooman, Marianne; Cia, Gabriel; Tsishyn, Matsvei; Strokach, Alexey; Hu, Zhiqiang; van Loggerenberg, Warren; Roth, Frederick P.; Radivojac, Predrag; Brenner, Steven E.; Cong, Qian; Grishin, Nick V.
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Tracing cancer evolution and heterogeneity using Hi-C
errNATURE COMMUNICATIONS
IF15.7
err2023-11-06
err5
errOAAI
errErdmann-Pham, Dan Daniel; Batra, Sanjit Singh; Turkalo, Timothy K.; Durbin, James; Blanchette, Marco; Yeh, Iwei; Shain, Hunter; Bastian, Boris C.; Song, Yun S.; Rokhsar, Daniel S.; Hockemeyer, Dirk
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DNA language models are powerful predictors of genome-wide variant effectsDNA语言模型是全基因组变异效应的有力预测因子
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-10-26
err17
errOAAI
errBenegas, Gonzalo; Batra, Sanjit Singh; Song, Yun S.
err分享
err收藏
Cross-protein transfer learning substantially improves disease variant prediction
errGENOME BIOLOGY
IF9.4
err2023-08-07
err15
errOAAI
errJagota, Milind; Ye, Chengzhong; Albors, Carlos; Rastogi, Ruchir; Koehl, Antoine; Ioannidis, Nilah; Song, Yun S.
err分享
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CherryML: scalable maximum likelihood estimation of phylogenetic models
errNATURE METHODS
IF32.1
err2023-06-29
err2
errOAAI
errPrillo, Sebastian; Deng, Yun; Boyeau, Pierre; Li, Xingyu; Chen, Po-Yen; Song, Yun S.
err分享
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研究方向

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合作学者
合作期刊
M
M Snyder
H 指数: 210 · 论文数: 3.3K
J
Jean‐Laurent Casanova
H 指数: 171 · 论文数: 1.4K
J
Jillian F. Banfield
H 指数: 154 · 论文数: 935
R
Rasmus Nielsen
H 指数: 151 · 论文数: 525
R
Richard Durbin
H 指数: 149 · 论文数: 465
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