Stefan L. Ameres - Publications, H-index & Citations

Stefan L. Ameres

university of vienna

27H指数

74论文数

6.7K被引数

收录论文 32

发表时间

Collective homeostasis of condensation-prone proteins via their mRNAs 凝聚倾向蛋白通过其mRNA实现的集体稳态

Nature

IF48.5

2025-09-24

OAAI

Rupert Faraway; Neve Costello Heaven; Holly Digby; Klara Kuret Hodnik; Jure Rebselj; Oscar G. Wilkins; Anob M. Chakrabarti; Ira A. Iosub; Neža Vadnjal; Rhys Dore; Lea Knez; Stefan L. Ameres; Clemens Plaschka; Jernej Ule

ERH regulates type II interferon immune signaling through post-transcriptional regulation of JAK2 mRNA ERH通过JAK2 mRNA的转录后调控来调节II型干扰素免疫信号。

NUCLEIC ACIDS RESEARCH

IF13.1

2025-07-08

PREAI

Soderholm, Adrian; Vunjak, Milica; de Almeida, Melanie; Popitsch, Niko; Podvalnaya, Nadezda; Araguas-Rodriguez, Pablo; Scinicariello, Sara; Nischwitz, Emily; Butter, Falk; Ketting, Rene F.; Ameres, Stefan L.; Mueller-McNicoll, Michaela; Zuber, Johannes; Versteeg, Gijs A.

Proteome-scale tagging and functional screening in mammalian cells by ORFtag ORFtag在哺乳动物细胞中的蛋白质组尺度标记和功能筛选

NATURE METHODS

IF32.1

2024-07-05

OAAI

Nemcko, Filip; Himmelsbach, Moritz; Loubiere, Vincent; Yelagandula, Ramesh; Pagani, Michaela; Fasching, Nina; Brennecke, Julius; Elling, Ulrich; Stark, Alexander; Ameres, Stefan L.

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework

GENOME BIOLOGY

IF9.4

2024-06-25

OAAI

Popitsch, Niko; Neumann, Tobias; von Haeseler, Arndt; Ameres, Stefan L.

Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types

EMBO JOURNAL

IF8.3

2024-04-30

OAAI

Mandlbauer, Ariane; Sun, Qiong; Popitsch, Niko; Schwickert, Tanja; Spanova, Miroslava; Wang, Jingkui; Ameres, Stefan L.; Busslinger, Meinrad; Cochella, Luisa

QUANTROseq, a transcriptomic based drug discovery platform using time-resolved gene expression profiling: Identification of inhibitors and degraders of transcription factors and cell signaling regulators

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Sabo, Arianna; Griesmayr, Nina Fasching; Neumann, Tobias; Manzenreither, Raphael; Ivankovic, Maja; Costa, Rodrigo Pacheco Valamatos; Rieser, Sarah; Scinicariello, Sara; Triska, Petr; Stingeder, Anna; Gruss, Astrid; Cubero, Ryan; Frank, Olga; Sowemimo, Ivica; Kirchgatterer, Paul; Cantoran, Adriana; Ameres, Stefan; Zuber, Johannes; Bauer, Michael

mRNA stability and m6A are major determinants of subcellular mRNA localization in neurons

MOLECULAR CELL

IF16.6

2023-08-01

OAAI

Loedige, Inga; Baranovskii, Artem; Mendonsa, Samantha; Dantsuji, Sayaka; Popitsch, Niko; Breimann, Laura; Zerna, Nadja; Cherepanov, Vsevolod; Milek, Miha; Ameres, Stefan; Chekulaeva, Marina

SLAMseq resolves the kinetics of maternal and zygotic gene expression during early zebrafish embryogenesis

CELL REPORTS

IF6.9

2023-02-01

OAAI

Bhat, Pooja; Cabrera-Quio, Luis E.; Herzog, Veronika A.; Fasching, Nina; Pauli, Andrea; Ameres, Stefan L.

Hijacking of transcriptional condensates by endogenous retroviruses

NATURE GENETICS

IF31.8

2022-07-21

OAAI

Asimi, Vahid; Kumar, Abhishek Sampath; Niskanen, Henri; Riemenschneider, Christina; Hetzel, Sara; Naderi, Julian; Fasching, Nina; Popitsch, Niko; Du, Manyu; Kretzmer, Helene; Smith, Zachary D.; Weigert, Raha; Walther, Maria; Mamde, Sainath; Meierhofer, David; Wittler, Lars; Buschow, Rene; Timmermann, Bernd; Cisse, Ibrahim I.; Ameres, Stefan L.; Meissner, Alexander; Hnisz, Denes

Structure-function analysis of microRNA 3′-end trimming by Nibbler

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2020-11-16

OAAI

Xie, Wei; Sowemimo, Ivica; Hayashi, Rippei; Wang, Juncheng; Burkard, Thomas R.; Brennecke, Julius; Ameres, Stefan L.; Patel, Dinshaw J.

Time-Resolved Small RNA Sequencing Unravels the Molecular Principles of MicroRNA Homeostasis

MOLECULAR CELL

IF16.6

2019-08-01

114

OAAI

Reichholf, Brian; Herzog, Veronika A.; Fasching, Nina; Manzenreither, Raphael A.; Sowemimo, Ivica; Ameres, Stefan L.

Sequencing cell-type-specific transcriptomes with SLAM-ITseq (vol 14, pg 2261, 2019)

NATURE PROTOCOLS

IF16

2019-07-11

OAAI

Matsushima, Wayo; Herzog, Veronika A.; Neumann, Tobias; Gapp, Katharina; Zuber, Johannes; Ameres, Stefan L.; Miska, Eric A.

Sequencing cell-type-specific transcriptomes with SLAM-ITseq

NATURE PROTOCOLS

IF16

2019-06-26

OAAI

Matsushima, Wayo; Herzog, Veronika A.; Neumann, Tobias; Gapp, Katharina; Zuber, Johannes; Ameres, Stefan L.; Miska, Eric A.

Structural basis for acceptor RNA substrate selectivity of the 3 terminal uridylyl transferase Tailor

NUCLEIC ACIDS RESEARCH

IF13.1

2018-11-20

OAAI

Kroupova, Alena; Ivascu, Anastasia; Reimao-Pinto, Madalena M.; Ameres, Stefan L.; Jinek, Martin

Small RNAs Are Trafficked from the Epididymis to Developing Mammalian Sperm

DEVELOPMENTAL CELL

IF8.7

2018-08-01

273

OAAI

Sharma, Upasna; Sun, Fengyun; Conine, Colin C.; Reichholf, Brian; Kukreja, Shweta; Herzog, Veronika A.; Ameres, Stefan L.; Rando, Oliver J.

Positioning Europe for the EPITRANSCRIPTOMICS challenge

RNA BIOLOGY

IF3.4

2018-05-09

OAAI

Jantsch, Michael F.; Quattrone, Alessandro; O'Connell, Mary; Helm, Mark; Frye, Michaela; Macias-Gonzales, Manuel; Ohman, Marie; Ameres, Stefan; Willems, Luc; Fuks, Francois; Oulas, Anastasis; Vanacova, Stepanka; Nielsen, Henrik; Bousquet-Antonelli, Cecile; Motorin, Yuri; Roignant, Jean-Yves; Balatsos, Nikolaos; Dinnyes, Andras; Baranov, Pavel; Kelly, Vincent; Lamm, Ayelet; Rechavi, Gideon; Pelizzola, Mattia; Liepins, Janis; Kholodnyuk, Irina Holodnuka; Zammit, Vanessa; Ayers, Duncan; Drablos, Finn; Dahl, John Arne; Bujnicki, Janusz; Jeronimo, Carmen; Almeida, Raquel; Neagu, Monica; Costache, Marieta; Bankovic, Jasna; Banovic, Bojana; Kyselovic, Jan; Valor, Luis Miguel; Selbert, Stefan; Pir, Pinar; Demircan, Turan; Cowling, Victoria; Schaefer, Matthias; Rossmanith, Walter; Lafontaine, Denis; David, Alexandre; Carre, Clement; Lyko, Frank; Schaffrath, Raffael; Schwartz, Schraga; Verdel, Andre; Klungland, Arne; Purta, Elzbieta; Timotijevic, Gordana; Cardona, Fernando; Davalos, Alberto; Ballana, Ester; O'Carroll, Donal; Ule, Jernej; Fray, Rupert

Cell-type specific sequencing of microRNAs from complex animal tissues

NATURE METHODS

IF32.1

2018-02-26

OAAI

Alberti, Chiara; Manzenreither, Raphael A.; Sowemimo, Ivica; Burkard, Thomas R.; Wang, Jingkui; Mahofsky, Katharina; Ameres, Stefan L.; Cochella, Luisa

SLAM-ITseq: sequencing cell type-specific transcriptomes without cell sorting

DEVELOPMENT

IF3.6

2018-01-01

OAAI

Matsushima, Wayo; Herzog, Veronika A.; Neumann, Tobias; Gapp, Katharina; Zuber, Johannes; Ameres, Stefan L.; Miska, Eric A.

Thiol-linked alkylation of RNA to assess expression dynamics

NATURE METHODS

IF32.1

2017-09-25

383

OAAI

Herzog, Veronika A.; Reichholf, Brian; Neumann, Tobias; Rescheneder, Philipp; Bhat, Pooja; Burkard, Thomas R.; Wlotzka, Wiebke; von Haeseler, Arndt; Zuber, Johannes; Ameres, Stefan L.

Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila 果蝇中尿苷化触发的衰变对细胞质RNA进行监视的分子基础

EMBO JOURNAL

IF8.3

2016-10-11

OAAI

Reimao-Pinto, Madalena M.; Manzenreither, Raphael A.; Burkard, Thomas R.; Sledz, Pawel; Jinek, Martin; Mechtler, Karl; Ameres, Stefan L.

研究方向