Karim Gharbi - Publications, H-index & Citations

Karim Gharbi

Norwich Research Park

48H指数

214论文数

1.0W被引数

收录论文 54

发表时间

De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome 从头注释揭示了六倍体小麦泛基因组中的转录组复杂性

Nature Communications

IF15.7

2025-10-06

OAAI

Benjamen White; Thomas Lux; Rachel Rusholme-Pilcher; Angéla Juhász; Gemy Kaithakottil; Susan Duncan; James Simmonds; Hannah Rees; Jonathan Wright; Joshua Colmer; Sabrina Ward; Ryan Joynson; Benedict Coombes; Naomi Irish; Suzanne Henderson; Tom Barker; Helen Chapman; Leah Catchpole; Karim Gharbi; Utpal Bose; Moeko Okada; Hirokazu Handa; Shuhei Nasuda; Kentaro K. Shimizu; Heidrun Gundlach; Daniel Lang; Guy Naamati; Erik J. Legg; Arvind K. Bharti; Michelle L. Colgrave; Wilfried Haerty; Cristobal Uauy; David Swarbreck; Philippa Borrill; Jesse A. Poland; Simon G. Krattinger; Nils Stein; Klaus F. X. Mayer; Curtis Pozniak; Manuel Spannagl; Anthony Hall

Whole Genome Sequencing Reveals How Plasticity and Genetic Differentiation Underlie Sympatric Morphs of Arctic Charr 全基因组测序揭示北极红点鲑同域形态的塑性和遗传分化机制

Molecular Ecology

IF3.9

2025-08-26

OAAI

Khrystyna Kurta; Mariano Olivera Fedi; Kendall Baker; Tom Barker; Leah Catchpole; Claudio Ciofi; Arianna Cocco; Joanna Collins; Genevieve Diedericks; Maria Angela Diroma; Alex Durrant; Kjetil Hindar; Alessio Iannucci; Naomi Irish; Vanda Knitlhoffer; Linda Laikre; Henrique G. Leitão; Sacha Lucchini; Seanna McTaggart; Arnar Pálsson; Mats E. Pettersson; Nils Ryman; Sigurður S. Snorrason; Hannes Svardal; David Swarbreck; Robert M. Waterhouse; Christopher Watkins; Jonathan M. D. Wood; Han Xiao; Karim Gharbi; Zophonías O. Jónsson; Leif Andersson

Most human DNA replication initiation is dispersed throughout the genome with only a minority within previously identified initiation zones 大多数人类DNA复制起始是分散在整个基因组中的，只有少数位于先前确定的起始区域内。

GENOME BIOLOGY

IF9.4

2025-05-09

OAAI

Carrington, Jamie T.; Wilson, Rosemary H. C.; de la Vega, Eduardo; Thiyagarajan, Sathish; Barker, Tom; Catchpole, Leah; Durrant, Alex; Knitlhoffer, Vanda; Watkins, Chris; Gharbi, Karim; Nieduszynski, Conrad A.

Reconstruction of the X and Y haplotypes in the genetically improved Abbassa nile tilapia genome assembly 在遗传改良的Abbassa尼罗罗非鱼基因组组装中X和Y单倍型的重建

SCIENTIFIC REPORTS

IF3.9

2025-05-08

OAAI

Etherington, Graham; Ciezarek, Adam; Mehta, Tarang; Barker, Tom; Durrant, Alex; Fraser, Fiona; Henderson, Suzanne; Irish, Naomi; Kaithakottil, Gemy; Knitlhoffer, Vanda; Ali, Shimaa; Trong, Trinh; Watkins, Chris; Swarbreck, David; Gharbi, Karim; Benzie, John; Haerty, Wilfried

Nuclear and Mitochondrial Genome Assemblies for the Endangered Wood-Decaying Fungus Somion occarium

GENOME BIOLOGY AND EVOLUTION

IF2.8

2025-01-10

OAAI

Hill, Rowena; Mcgowan, Jamie; Brabcova, Vendula; Mctaggart, Seanna; Irish, Naomi; Barker, Tom; Knitlhoffer, Vanda; Lucchini, Sacha; Baker, Kendall; Catchpole, Leah; Watkins, Chris; Gharbi, Karim; Kaithakottil, Gemy; Tracey, Alan; Wood, Jonathan M. D.; Tomsovsky, Michal; Baldrian, Petr; Swarbreck, David; Hall, Neil

QTL mapping provides new insights into emamectin benzoate resistance in salmon lice, Lepeophtheirus salmonis

BMC GENOMICS

IF3.7

2024-12-18

OAAI

Sturm, Armin; Carmona-Antonanzas, Greta; Humble, Joseph L.; Croton, Claudia; Boyd, Sally; Mphuti, Rapule; Taggart, John B.; Bassett, David I.; Houston, Ross D.; Gharbi, Karim; Bron, James E.; Bekaert, Michael

The genome sequence of the Violet Carpenter Bee, Xylocopa violacea (Linnaeus, 1785): a hymenopteran species undergoing range expansion

HEREDITY

IF3.9

2024-09-16

OAAI

Nash, Will J.; Man, Angela; McTaggart, Seanna; Baker, Kendall; Barker, Tom; Catchpole, Leah; Durrant, Alex; Gharbi, Karim; Irish, Naomi; Kaithakottil, Gemy; Ku, Debby; Providence, Aaliyah; Shaw, Felix; Swarbreck, David; Watkins, Chris; McCartney, Ann M.; Formenti, Giulio; Mouton, Alice; Vella, Noel; von Reumont, Bjoern M.; Vella, Adriana; Haerty, Wilfried

Chromosomal inversions from an initial ecotypic divergence drive a gradual repeated radiation of Galapagos beetles

SCIENCE ADVANCES

IF12.5

2024-05-31

OAAI

Vangestel, Carl; Swaegers, Janne; De Corte, Zoe; Dekoninck, Wouter; Gharbi, Karim; Gillespie, Rosemary; Vandekerckhove, Matthias; Van Belleghem, Steven M.; Hendrickx, Frederik

Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids

PLOS GENETICS

IF3.7

2023-10-05

OAAI

McGowan, Jamie; Kilias, Estelle S.; Alacid, Elisabet; Lipscombe, James; Jenkins, Benjamin H.; Gharbi, Karim; Kaithakottil, Gemy G.; Macaulay, Iain C.; McTaggart, Seanna; Warring, Sally D.; Richards, Thomas A.; Hall, Neil; Swarbreck, David

Different waves of postglacial recolonisation and genomic structure of bank vole populations in NE Poland

HEREDITY

IF3.9

2023-03-21

OAAI

Niedzialkowska, Magdalena; Tarnowska, Ewa; Babik, Wieslaw; Konczal, Mateusz; Gharbi, Karim; Cezard, Timothee; Jedrzejewska, Bogumila

Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus

BMC GENOMICS

IF3.7

2022-12-15

OAAI

Etherington, G. J.; Nash, W.; Ciezarek, A.; Mehta, T. K.; Barria, A.; Penaloza, C.; Khan, M. G. Q.; Durrant, A.; Forrester, N.; Fraser, F.; Irish, N.; Kaithakottil, G. G.; Lipscombe, J.; Trong, T.; Watkins, C.; Swarbreck, D.; Angiolini, E.; Cnaani, A.; Gharbi, K.; Houston, R. D.; Benzie, J. A. H.; Haerty, W.

First large-scale quantification study of DNA preservation in insects from natural history collections using genome-wide sequencing

METHODS IN ECOLOGY AND EVOLUTION

IF6.2

2022-08-17

OAAI

Mullin, Victoria E.; Stephen, William; Arce, Andres N.; Nash, Will; Raine, Calum; Notton, David G.; Whiffin, Ashleigh; Blagderov, Vladimir; Gharbi, Karim; Hogan, James; Hunter, Tony; Irish, Naomi; Jackson, Simon; Judd, Steve; Watkins, Chris; Haerty, Wilfried; Ollerton, Jeff; Brace, Selina; Gill, Richard J.; Barnes, Ian

Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes (vol 23, 42, 2022)

BMC GENOMICS

IF3.7

2022-01-25

OAAI

Wright, David J.; Hall, Nicola A. L.; Irish, Naomi; Man, Angela L.; Glynn, Will; Mould, Arne; De Los Angeles, Alejandro; Angiolini, Emily; Swarbreck, David; Gharbi, Karim; Tunbridge, Elizabeth M.; Haerty, Wilfried

Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes

BMC GENOMICS

IF3.7

2022-01-10

OAAI

Wright, David J.; Hall, Nicola A. L.; Irish, Naomi; Man, Angela L.; Glynn, Will; Mould, Arne; De los Angeles, Alejandro; Angiolini, Emily; Swarbreck, David; Gharbi, Karim; Tunbridge, Elizabeth M.; Haerty, Wilfried

PHASE 2 OF THE NORWICH COVID-19 TESTING INITIATIVE: AN EVALUATION

JOURNAL OF EPIDEMIOLOGY AND COMMUNITY HEALTH

IF3.7

2021-09-04

OAAI

Gillam, Tara Berger; Chin, Jeannette; Gharbi, Karim; Hitchcock, Mark; Davidson, Rose; Shearer, Neil; Steel, Nick

A simple and robust real-time qPCR method for the detection of PIK3CA mutations (vol 8, 4290, 2018)

SCIENTIFIC REPORTS

IF3.9

2021-08-06

OAAI

Alvarez-Garcia, Virginia; Bartos, Clare; Keraite, Ieva; Trivedi, Urmi; Brennan, Paul M.; Kersaudy-Kerhoas, Maiwenn; Gharbi, Karim; Oikonomidou, Olga; Leslie, Nicholas R.

Phase 2 of the Norwich COVID-19 testing initiative: an evaluation

JOURNAL OF PUBLIC HEALTH

IF3.1

2021-04-12

OAAI

Berger Gillam, T.; Chin, J.; Cossey, S.; Culley, K.; Davidson, R. K.; Edwards, D. R.; Gharbi, K.; Goodwin, N.; Hall, N.; Hitchcock, M.; Jupp, O. J.; Lipscombe, J.; Parr, G.; Shearer, N.; Smith, R.; Steel, N.

MolluscDB: a genome and transcriptome database for molluscs

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

IF4.7

2021-04-05

OAAI

Caurcel, Carlos; Laetsch, Dominik R.; Challis, Richard; Kumar, Sujai; Gharbi, Karim; Blaxter, Mark

Norwich COVID-19 testing initiative pilot: evaluating the feasibility of asymptomatic testing on a university campus

JOURNAL OF PUBLIC HEALTH

IF3.1

2020-10-30

OAAI

Gillam, T. Berger; Cole, J.; Gharbi, K.; Angiolini, E.; Barker, T.; Bickerton, P.; Brabbs, T.; Chin, J.; Coen, E.; Cossey, S.; Davey, R.; Davidson, R.; Durrant, A.; Edwards, D.; Hall, N.; Henderson, S.; Hitchcock, M.; Irish, N.; Lipscombe, J.; Jones, G.; Parr, G.; Rushworth, S.; Shearer, N.; Smith, R.; Steel, N.

Deciphering mollusc shell production: the roles of genetic mechanisms through to ecology, aquaculture and biomimetics

BIOLOGICAL REVIEWS

IF11.7

2020-07-31

OAAI

Clark, Melody S.; Peck, Lloyd S.; Arivalagan, Jaison; Backeljau, Thierry; Berland, Sophie; Cardoso, Joao C. R.; Caurcel, Carlos; Chapelle, Gauthier; De Noia, Michele; Dupont, Sam; Gharbi, Karim; Hoffman, Joseph, I; Last, Kim S.; Marie, Arul; Melzner, Frank; Michalek, Kati; Morris, James; Power, Deborah M.; Ramesh, Kirti; Sanders, Trystan; Sillanpaa, Kirsikka; Sleight, Victoria A.; Stewart-Sinclair, Phoebe J.; Sundell, Kristina; Telesca, Luca; Vendrami, David L. J.; Ventura, Alexander; Wilding, Thomas A.; Yarra, Tejaswi; Harper, Elizabeth M.

研究方向