Mitchell, Patrick K.; Wang, Leyi; Stanhope, Bryce J.; Cronk, Brittany D.; Anderson, Renee; Mohan, Shipra; Zhou, Lijuan; Sanchez, Susan; Bartlett, Paula; Maddox, Carol; DeShambo, Vanessa; Mani, Rinosh; Hengesbach, Lindsy M.; Gresch, Sarah; Wright, Katie; Mor, Sunil; Zhang, Shuping; Shen, Zhenyu; Yan, Lifang; Mackey, Rebecca; Franklin-Guild, Rebecca; Zhang, Yan; Prarat, Melanie; Shiplett, Katherine; Ramachandran, Akhilesh; Narayanan, Sai; Sanders, Justin; Hunkapiller, Andree A.; Lahmers, Kevin; Carbonello, Amanda A.; Aulik, Nicole; Lim, Ailam; Cooper, Jennifer; Jones, Angelica; Guag, Jake; Nemser, Sarah M.; Tyson, Gregory H.; Timme, Ruth; Strain, Errol; Reimschuessel, Renate; Ceric, Olgica; Goodman, Laura B.

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

面向未来并最大化元数据的效用: PHA4GE SARS-CoV-2上下文数据规范包

GIGASCIENCE

IF3.9

2022-02-164

OAAI

Griffiths, Emma J.; Timme, Ruth E.; Mendes, Catarina Ines; Page, Andrew J.; Alikhan, Nabil-Fareed; Fornika, Dan; Maguire, Finlay; Campos, Josefina; Park, Daniel; Olawoye, Idowu B.; Oluniyi, Paul E.; Anderson, Dominique; Christoffels, Alan; da Silva, Anders Goncalves; Cameron, Rhiannon; Dooley, Damion; Katz, Lee S.; Black, Allison; Karsch-Mizrachi, Ilene; Barrett, Tanya; Johnston, Anjanette; Connor, Thomas R.; Nicholls, Samuel M.; Witney, Adam A.; Tyson, Gregory H.; Tausch, Simon H.; Raphenya, Amogelang R.; Alcock, Brian; Aanensen, David M.; Hodcroft, Emma; Hsiao, William W. L.; Vasconcelos, Ana Tereza R.; MacCannell, Duncan R.

Investigating the Distribution of Strains of Erwinia amylovora and Streptomycin Resistance in Apple Orchards in New York Using Clustered Regularly Interspaced Short Palindromic Repeat Profiles: A 6-Year Follow-Up

PLANT DISEASE

IF4.4

2021-11-0111

Interpretative Labor and the Bane of Nonstandardized Metadata in Public Health Surveillance and Food Safety

CLINICAL INFECTIOUS DISEASES

IF7.3

2021-07-0815

Occurrence, antimicrobial resistance and whole genome sequence analysis of Salmonella serovars from pig farms in Ilorin, North-central Nigeria

尼日利亚中北部伊洛林养猪场沙门氏菌血清型的发生，耐药性和全基因组序列分析

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

IF5.2

2021-07-0111

PREAI

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities (vol 6, e01194-20, 2021)

微生物组元数据标准: 国家微生物组数据协作研讨会和后续活动的报告 (第6卷，e01194-20，2021)

MSYSTEMS

IF4.6

2021-06-290

OAAI

Vangay, Pajau; Burgin, Josephine; Johnston, Anjanette; Beck, Kristen L.; Berrios, Daniel C.; Blumberg, Kai; Canon, Shane; Chain, Patrick; Chandonia, John-Marc; Christianson, Danielle; Costes, Sylvain V.; Damerow, Joan; Duncan, William D.; Dundore-Arias, Jose Pablo; Fagnan, Kjiersten; Galazka, Jonathan M.; Gibbons, Sean M.; Hays, David; Hervey, Judson; Hu, Bin; Hurwitz, Bonnie L.; Jaiswal, Pankaj; Joachimiak, Marcin P.; Kinkel, Linda; Ladau, Joshua; Martin, Stanton L.; McCue, Lee Ann; Miller, Kayd; Mouncey, Nigel; Mungall, Chris; Pa, Evangelos; Reddy, T. B. K.; Richardson, Lorna; Roux, Simon; Schriml, Lynn M.; Shaffer, Justin P.; Sundaramurthi, Jagadish Chandrabose; Thompson, Luke R.; Timme, Ruth E.; Zheng, Jie; Wood-Charlson, Elisha M.; Eloe-Fadrosh, Emiley A.

Phylogenetic and Biogeographic Patterns of Vibrio parahaemolyticus Strains from North America Inferred from Whole-Genome Sequence Data (vol 87, e01403-20, 2021)

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IF3.7

2021-05-263

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities

微生物组元数据标准: 国家微生物组数据协作研讨会和后续活动的报告

MSYSTEMS

IF4.6

2021-02-2339

OAAI

Vangay, Pajau; Burgin, Josephine; Johnston, Anjanette; Beck, Kristen L.; Berrios, Daniel C.; Blumberg, Kai; Canon, Shane; Chain, Patrick; Chandonia, John-Marc; Christianson, Danielle; Costes, Sylvain V.; Damerow, Joan; Duncan, William D.; Dundore-Arias, Jose Pablo; Fagnan, Kjiersten; Galazka, Jonathan M.; Gibbons, Sean M.; Hays, David; Hervey, Judson; Hu, Bin; Hurwitz, Bonnie L.; Jaiswal, Pankaj; Joachimiak, Marcin P.; Kinkel, Linda; Ladau, Joshua; Martin, Stanton L.; McCue, Lee Ann; Miller, Kayd; Mouncey, Nigel; Mungall, Chris; Pafilis, Evangelos; Reddy, T. B. K.; Richardson, Lorna; Roux, Simon; Schriml, Lynn M.; Shaffer, Justin P.; Sundaramurthi, Jagadish Chandrabose; Thompson, Luke R.; Timme, Ruth E.; Zheng, Jie; Wood-Charlson, Elisha M.; Eloe-Fadrosh, Emiley A.

Phylogeny of Salmonella enterica subspecies arizonae by whole-genome sequencing reveals high incidence of polyphyly and low phase 1 H antigen variability

全基因组测序的沙门氏菌亚种arizonae的系统发育揭示了多系和低相1 h抗原变异性的高发生率

MICROBIAL GENOMICS

IF4

2021-02-014

OAAI

Phylogenetic and Biogeographic Patterns of Vibrio parahaemolyticus Strains from North America Inferred from Whole-Genome Sequence Data

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IF3.7

2021-01-1523

OAAI

Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises