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C

Caroline Uhler

Broad Institute of MIT and Harvard

29H指数
226论文数
4.1K被引数
收录论文 43
发表时间
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Author Correction: Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors作者更正：基因组规模的空间映射揭示霍奇金淋巴瘤微环境中的肿瘤细胞存活因子
errNature Communications
IF15.7
err2026-05-29
err0
errOAAI
errVignesh Shanmugam; Neriman Tokcan; Daniel Chafamo; Sean Sullivan; Mehdi Borji; Haley Martin; Gail Newton; Naeem Nadaf; Saoirse Hanbury; Irving Barrera; Dylan Cable; Jackson Weir; Orr Ashenberg; Geraldine Pinkus; Scott Rodig; Caroline Uhler; Evan Macosko; Margaret Shipp; Abner Louissaint; Fei Chen; Todd R. Golub
err分享
err收藏
Detecting chromatin state alterations in PBMCs associated with Type 2 Diabetes Mellitus检测与2型糖尿病相关的PBMCs中染色质状态的变化
errCommunications Medicine
IF6.3
err2026-03-17
err0
errOAAI
errMaryam Moazeni Afarani; Rajshikhar Gupta; Caroline Uhler; Issa Fetian; GV Shivashankar
err分享
err收藏
Multimodal framework for the joint analysis of single-cell RNA and T cell receptor sequencing data predicts T cell response to cancer immunotherapy多模态框架用于单细胞RNA和T细胞受体测序数据的联合分析，可预测T细胞对癌症免疫治疗的反应
errNature Communications
IF15.7
err2026-03-12
err0
errOAAI
errChujun He; Matthew Amodio; Orr Ashenberg; Kai W. Wucherpfennig; Ramnik J. Xavier; Caroline Uhler
err分享
err收藏
Partially shared multi-modal embedding learns holistic representation of cell state部分共享的多模态嵌入学习细胞状态的整体表征
errNature Computational Science
IF18.3
err2026-02-25
err0
errOAAI
errXinyi Zhang; G. V. Shivashankar; Caroline Uhler
err分享
err收藏
Learning genetic perturbation effects with variational causal inference学习遗传扰动效应的变分因果推断
errPLoS Computational Biology
IF3.6
err2026-02-02
err0
PREAI
errLiu, Emily; Zhang, Jiaqi; Uhler, Caroline
err分享
err收藏
Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors基因组规模的空间图谱绘制揭示了霍奇金淋巴瘤微环境中的肿瘤细胞存活因子
errNature Communications
IF15.7
err2025-12-20
err0
errOAAI
errVignesh Shanmugam; Neriman Tokcan; Daniel Chafamo; Sean Sullivan; Mehdi Borji; Haley Martin; Gail Newton; Naeem Nadaf; Saoirse Hanbury; Irving Barrera; Dylan Cable; Jackson Weir; Orr Ashenberg; Geraldine Pinkus; Scott Rodig; Caroline Uhler; Evan Macosko; Margaret Shipp; Abner Louissaint; Fei Chen; Todd R. Golub
err分享
err收藏
A Representation Fusion Framework for Decoupling Diagnostic Information in Multimodal Learning一种用于多模态学习中解耦诊断信息的表示融合框架
errnpj Digital Medicine
IF15.1
err2025-12-17
err0
errOAAI
errSana Tonekaboni; Sam Freesun Friedman; Xinyi Zhang; Mahnaz Maddah; Caroline Uhler
err分享
err收藏
Single-cell image-based screens identify host regulators of Ebola virus infection dynamics单细胞图像筛选鉴定宿主调控埃博拉病毒感染动态的因子
errNature Microbiology
IF19.4
err2025-07-24
err0
PREAI
errRebecca J. Carlson; J. J. Patten; George Stefanakis; Brian Y. Soong; Adityanarayanan Radhakrishnan; Avtar Singh; Naveen Thakur; Kathleen C. F. Sheehan; Gaya K. Amarasinghe; Nir Hacohen; Christopher F. Basler; Daisy W. Leung; Caroline Uhler; Robert A. Davey; Paul C. Blainey
err分享
err收藏
Prediction of protein subcellular localization in single cells蛋白质亚细胞定位在单细胞中的预测
errNATURE METHODS
IF32.1
err2025-05-13
err0
PREAI
errZhang, Xinyi; Tseo, Yitong; Bai, Yunhao; Chen, Fei; Uhler, Caroline
err分享
err收藏
Unsupervised representation learning of chromatin images identifies changes in cell state and tissue organization in DCIS
errNATURE COMMUNICATIONS
IF15.7
err2024-07-20
err3
errOAAI
errZhang, Xinyi; Venkatachalapathy, Saradha; Paysan, Daniel; Schaerer, Paulina; Tripodo, Claudio; Uhler, Caroline; Shivashankar, G. V.
err分享
err收藏
Synthetic lethality screening with Recursive Feature Machines
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errRadhakrishnan, Adityanarayanan; Cai, Cathy; Weir, Barbara A.; Moy, Christopher; Uhler, Caroline
err分享
err收藏
Building a two-way street between cell biology and machine learning
errNATURE CELL BIOLOGY
IF19.1
err2024-01-16
err1
PREAI
errUhler, Caroline
err分享
err收藏
Transcriptional changes are tightly coupled to chromatin reorganization during cellular aging
errAGING CELL
IF7.1
err2023-12-07
err1
errOAAI
errBraunger, Jana M.; Cammarata, Louis V.; Sornapudi, Trinadha Rao; Uhler, Caroline; Shivashankar, G. V.
err分享
err收藏
Active learning for optimal intervention design in causal models
errNATURE MACHINE INTELLIGENCE
IF23.9
err2023-10-02
err10
errOAAI
errZhang, Jiaqi; Cammarata, Louis; Squires, Chandler; Sapsis, Themistoklis P.; Uhler, Caroline
err分享
err收藏
Transfer Learning with Kernel Methods
errNATURE COMMUNICATIONS
IF15.7
err2023-09-09
err5
errOAAI
errRadhakrishnan, Adityanarayanan; Luyten, Max Ruiz; Prasad, Neha; Uhler, Caroline
err分享
err收藏
The DeCAMFounder: nonlinear causal discovery in the presence of hidden variables
errJOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY
IF3.6
err2023-07-13
err1
errOAAI
errAgrawal, Raj; Squires, Chandler; Prasad, Neha; Uhler, Caroline
err分享
err收藏
Cross-modal autoencoder framework learns holistic representations of cardiovascular state跨模态自动编码器框架学习心血管状态的整体表示
errNATURE COMMUNICATIONS
IF15.7
err2023-04-28
err17
errOAAI
errRadhakrishnan, Adityanarayanan; Friedman, Sam F.; Khurshid, Shaan; Ng, Kenney; Batra, Puneet; Lubitz, Steven A.; Philippakis, Anthony A.; Uhler, Caroline
err分享
err收藏
Wide and deep neural networks achieve consistency for classification宽神经网络和深神经网络实现分类的一致性
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-30
err11
errOAAI
errRadhakrishnan, Adityanarayanan; Belkin, Mikhail; Uhler, Caroline
err分享
err收藏
Graph-based autoencoder integrates spatial transcriptomics with chromatin images and identifies joint biomarkers for Alzheimer's disease
errNATURE COMMUNICATIONS
IF15.7
err2022-12-03
err19
errOAAI
errZhang, Xinyi; Wang, Xiao; Shivashankar, G. V.; Uhler, Caroline
err分享
err收藏
Lateral confined growth of cells activates Lef1 dependent pathways to regulate cell-state transitions
errSCIENTIFIC REPORTS
IF3.9
err2022-10-15
err4
errOAAI
errYuan, Luezhen; Roy, Bibhas; Ratna, Prasuna; Uhler, Caroline; Shivashankar, G., V
err分享
err收藏

研究方向

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合作学者
合作期刊
T
Todd R. Golub
H 指数: 176 · 论文数: 749
S
Scott J. Rodig
H 指数: 129 · 论文数: 1.5K
N
Nir Hacohen
H 指数: 123 · 论文数: 618
K
Kai W. Wucherpfennig
H 指数: 99 · 论文数: 633
S
Steven A. Lubitz
H 指数: 99 · 论文数: 546
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