Alexander Stark - Publications, H-index & Citations

Alexander Stark

vienna biocenter

71H指数

187论文数

3.3W被引数

收录论文 60

发表时间

Predictive design of tissue-specific mammalian enhancers that function in the mouse embryo 预测在 mouse 胚胎中具有功能的组织特异性哺乳动物增强子的设计

Nature Genetics

IF29

2026-08-25

OAAI

Shenzhi Chen; Vincent Loubiere; Ethan W. Hollingsworth; Ken Murakami; Nikolaus Mandlburger; Sandra H. Jacinto; Atrin Dizehchi; Jacob Schreiber; Evgeny Z. Kvon; Alexander Stark

Enhancer cooperativity can compensate for loss of activity over large genomic distances 增强子协同作用可以弥补在大基因组距离上的活性损失。

MOLECULAR CELL

IF16.6

2025-01-01

OAAI

Thomas, Henry F.; Feng, Songjie; Haslhofer, Felix; Huber, Marie; Gallardo, Maria Garcia; Loubiere, Vincent; Vanina, Daria; Pitasi, Mattia; Stark, Alexander; Buecker, Christa

A genome-wide screen identifies silencers with distinct chromatin properties and mechanisms of repression 全基因组筛选鉴定具有不同染色质特性和抑制机制的沉默子

MOLECULAR CELL

IF16.6

2024-12-01

OAAI

Hofbauer, Lorena; Pleyer, Lisa-Marie; Reiter, Franziska; Schleiffer, Alexander; Vlasova, Anna; Serebreni, Leonid; Huang, Annie; Stark, Alexander

Developmental and housekeeping transcriptional programs display distinct modes of enhancer-enhancer cooperativity in Drosophila

NATURE COMMUNICATIONS

IF15.7

2024-10-03

OAAI

Loubiere, Vincent; de Almeida, Bernardo P.; Pagani, Michaela; Stark, Alexander

Pleural Effusion and Invasive Hemodynamic Measurements in Advanced Heart Failure

jacc heart failure

IF8.4

2024-09-01

PREAI

Glargaard, Signe; Deis, Tania; Abild-Nielsen, Annemette G.; Stark, Alexander; Thomsen, Jakob H.; Kristensen, Soren L.; Rossing, Kasper; Gustafsson, Finn; Thune, Jens Jakob

Proteome-scale tagging and functional screening in mammalian cells by ORFtag ORFtag在哺乳动物细胞中的蛋白质组尺度标记和功能筛选

NATURE METHODS

IF32.1

2024-07-05

OAAI

Nemcko, Filip; Himmelsbach, Moritz; Loubiere, Vincent; Yelagandula, Ramesh; Pagani, Michaela; Fasching, Nina; Brennecke, Julius; Elling, Ulrich; Stark, Alexander; Ameres, Stefan L.

Genomic surveillance of SARS-CoV-2 evolution by a centralised pipeline and weekly focused sequencing, Austria, January 2021 to March 2023

EUROSURVEILLANCE

IF7.8

2024-06-06

OAAI

Frank, Olga; Balboa, David Acitores; Novatchkova, Maria; Oezkan, Ezgi; Strobl, Marcus Martin; Yelagandula, Ramesh; Albanese, Tanino Guiseppe; Endler, Lukas; Amman, Fabian; Felsenstein, Vera; Gavrilovic, Milanka; Acosta, Melanie; Patocka, Timothej; Vogt, Alexander; Tamir, Ido; Klikovits, Julia; Zoufaly, Alexander; Seitz, Tamara; Foedinger, Manuela; Bergthaler, Andreas; Indra, Alexander; Schmid, Daniela; Klimek, Peter; Stark, Alexander; Allerberger, Franz; Benka, Bernhard; Reich, Katharina; Cochella, Luisa; Elling, Ulrich

An unbiased AAV-STARR-seq screen revealing the enhancer activity map of genomic regions in the mouse brain in vivo

SCIENTIFIC REPORTS

IF3.9

2023-04-25

OAAI

Chan, Ya-Chien; Kienle, Eike; Oti, Martin; Di Liddo, Antonella; Mendez-Lago, Maria; Aschauer, Dominik F.; Peter, Manuel; Pagani, Michaela; Arnold, Cosmas; Vonderheit, Andreas; Schoen, Christian; Kreuz, Sebastian; Stark, Alexander; Rumpel, Simon

Functionally distinct promoter classes initiate transcription via different mechanisms reflected in focused versus dispersed initiation patterns 功能上不同的启动子课程通过集中与分散的起始模式反映的不同机制启动转录

EMBO JOURNAL

IF8.3

2023-04-04

OAAI

Serebreni, Leonid; Pleyer, Lisa-Marie; Haberle, Vanja; Hendy, Oliver; Vlasova, Anna; Loubiere, Vincent; Nemcko, Filip; Bergauer, Katharina; Roitinger, Elisabeth; Mechtler, Karl; Stark, Alexander

Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

142

OAAI

Rehwinkel, J; Natalin, P; Stark, A; Brennecke, J; Cohen, SM; Izaurralde, E

Enhancers display constrained sequence flexibility and context-specific modulation of motif function 增强子显示受限的序列灵活性和基序功能的上下文特异性调节

GENOME RESEARCH

IF5.5

2023-03-20

OAAI

Reiter, Franziska; de Almeida, Bernardo P.; Stark, Alexander

Systematic identification and characterization of repressive domains in Drosophila transcription factors 果蝇转录因子中抑制结构域的系统鉴定和表征

EMBO JOURNAL

IF8.3

2022-12-22

OAAI

Klaus, Loni; de Almeida, Bernardo P.; Vlasova, Anna; Nemcko, Filip; Schleiffer, Alexander; Bergauer, Katharina; Hofbauer, Lorena; Rath, Martina; Stark, Alexander

Developmental and housekeeping transcriptional programs in Drosophila require distinct chromatin remodelers

MOLECULAR CELL

IF16.6

2022-10-01

OAAI

Hendy, Oliver; Serebreni, Leonid; Bergauer, Katharina; Muerdter, Felix; Huber, Lukas; Nemcko, Filip; Stark, Alexander

DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers DeepSTARR从DNA序列预测增强子活性，并实现合成增强子的从头设计

NATURE GENETICS

IF31.8

2022-05-12

105

OAAI

de Almeida, Bernardo P.; Reiter, Franziska; Pagani, Michaela; Stark, Alexander

Proteome-scale identification of transcriptional activators in human cells 人类细胞中转录激活因子的蛋白质组规模鉴定

MOLECULAR CELL

IF16.6

2022-02-01

OAAI

Nemcko, Filip; Stark, Alexander

PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC

NATURE COMMUNICATIONS

IF15.7

2021-10-19

OAAI

Appel, Lisa-Marie; Franke, Vedran; Bruno, Melania; Grishkovskaya, Irina; Kasiliauskaite, Aiste; Kaufmann, Tanja; Schoeberl, Ursula E.; Puchinger, Martin G.; Kostrhon, Sebastian; Ebenwaldner, Carmen; Sebesta, Marek; Beltzung, Etienne; Mechtler, Karl; Lin, Gen; Vlasova, Anna; Leeb, Martin; Pavri, Rushad; Stark, Alexander; Akalin, Altuna; Stefl, Richard; Bernecky, Carrie; Djinovic-Carugo, Kristina; Slade, Dea

Insights into gene regulation: From regulatory genomic elements to DNA-protein and protein-protein interactions

CURRENT OPINION IN CELL BIOLOGY

IF4.3

2021-06-01

PREAI

Serebreni, Leonid; Stark, Alexander

Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq

NATURE COMMUNICATIONS

IF15.7

2021-05-25

OAAI

Yelagandula, Ramesh; Bykov, Aleksandr; Vogt, Alexander; Heinen, Robert; Oezkan, Ezgi; Strobl, Marcus Martin; Baar, Juliane Christina; Uzunova, Kristina; Hajdusits, Bence; Kordic, Darja; Suljic, Erna; Kurtovic-Kozaric, Amina; Izetbegovic, Sebija; Schaeffer, Justine; Hufnagl, Peter; Zoufaly, Alexander; Seitz, Tamara; Foedinger, Manuela; Allerberger, Franz; Stark, Alexander; Cochella, Luisa; Elling, Ulrich

A high-throughput method to identify trans-activation domains within transcription factor sequences 一种高通量鉴定转录因子序列中反式激活结构域的方法

EMBO JOURNAL

IF8.3

2018-07-13

OAAI

Arnold, Cosmas D.; Nemcko, Filip; Woodfin, Ashley R.; Wienerroither, Sebastian; Vlasova, Anna; Schleiffer, Alexander; Pagani, Michaela; Rath, Martina; Stark, Alexander

Eukaryotic core promoters and the functional basis of transcription initiation 真核细胞核心启动子与转录起始的功能基础

NATURE REVIEWS MOLECULAR CELL BIOLOGY

IF90.2

2018-06-26

504

OAAI

Haberle, Vanja; Stark, Alexander

研究方向