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Community assessment of methods to deconvolve cellular composition from bulk gene expression (vol 15, 7362, 2024) 社区评估从批量基因表达中解卷积细胞组成的方法（vol 15, 7362, 2024） White, Brian S.; de Reynies, Aurelien; Newman, Aaron M.; Waterfall, Joshua J.; Lamb, Andrew; Yu, Rongshan; Guerrero-Gimenez, Martin E.; Domanskyi, Sergii; Monaco, Gianni; Chung, Verena; Banerjee, Jineta; Derrick, Daniel; Valdeolivas, Alberto; Li, Haojun; Xiao, Xu; Wang, Shun; Zheng, Frank; Yang, Wenxian; Catania, Carlos A.; Lang, Benjamin J.; Bertus, Thomas J.; Piermarocchi, Carlo; Caruso, Francesca P.; Ceccarelli, Michele; Yu, Thomas; Guo, Xindi; Bletz, Julie; Coller, John; Maecker, Holden; Duault, Caroline; Shokoohi, Vida; Patel, Shailja; Liliental, Joanna E.; Simon, Stockard; Saez-Rodriguez, Julio; Heiser, Laura M.; Guinney, Justin; Gentles, Andrew J. 分享 收藏
Community assessment of methods to deconvolve cellular composition from bulk gene expression White, Brian S.; de Reynies, Aurelien; Newman, Aaron M.; Waterfall, Joshua J.; Lamb, Andrew; Petitprez, Florent; Lin, Yating; Yu, Rongshan; Guerrero-Gimenez, Martin E.; Domanskyi, Sergii; Monaco, Gianni; Chung, Verena; Banerjee, Jineta; Derrick, Daniel; Valdeolivas, Alberto; Li, Haojun; Xiao, Xu; Wang, Shun; Zheng, Frank; Yang, Wenxian; Catania, Carlos A.; Lang, Benjamin J.; Bertus, Thomas J.; Piermarocchi, Carlo; Caruso, Francesca P.; Ceccarelli, Michele; Yu, Thomas; Guo, Xindi; Bletz, Julie; Coller, John; Maecker, Holden; Duault, Caroline; Shokoohi, Vida; Patel, Shailja; Liliental, Joanna E.; Simon, Stockard; Saez-Rodriguez, Julio; Heiser, Laura M.; Guinney, Justin; Gentles, Andrew J. 分享 收藏
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Quantification of cerebrospinal fluid tumor DNA in lung cancer patients with suspected leptomeningeal carcinomatosis 疑似脑膜癌病的肺癌患者脑脊液肿瘤DNA的定量分析 Azad, Tej D.; Nanjo, Shigeki; Jin, Michael C.; Chabon, Jacob J.; Kurtz, David M.; Chaudhuri, Aadel A.; Connolly, Ian D.; Hui, Angela Bik-Yu; Liu, Chih Long; Merriott, David; Ko, Ryan; Yoo, Christopher; Carter, Justin; Chen, Emily; Bonilla, Rene; Hata, Akito; Katakami, Nobuyuki; Irie, Kei; Yano, Seiji; Okimoto, Ross; Bivona, Trever G.; Newman, Aaron M.; Iv, Michael; Nagpal, Seema; Gephart, Melanie Hayden; Alizadeh, Ash A.; Diehn, Maximilian 分享 收藏
Spatially Segregated Macrophage Populations Predict Distinct Outcomes in Colon Cancer Matusiak, Magdalena; Hickey, John W.; van IJzendoorn, David G. P.; Lu, Guolan; Kidzinski, Lukasz; Zhu, Shirley; Colburg, Deana R. C.; Luca, Bogdan; Phillips, Darci J.; Brubaker, Sky W.; Charville, Gregory W.; Shen, Jeanne; Loh, Kyle M.; Okwan-Duodu, Derick K.; Nolan, Garry P.; Newman, Aaron M.; West, Robert B.; van de Rijn, Matt 分享 收藏
Prospective analysis of pretreatment circulating CD4 memory T cell features associated with severe immunotherapy toxicity Usmani, Abul; Earland, Noah; Zhang, Wubing; Harris, Peter K.; Bacchiocchi, Antonietta; Sachs, Chloe M.; Nene, Aishwarya; Chen, David Y.; Sznol, Mario; Halaban, Ruth; Newman, Aaron M.; Chaudhuri, Aadel A. 分享 收藏
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Sarcoma microenvironment cell states and ecosystems are associated with prognosis and predict response to immunotherapy Subramanian, Ajay; Nemat-Gorgani, Neda; Ellis-Caleo, Timothy J.; van IJzendoorn, David G. P.; Sears, Timothy J.; Somani, Anish; Luca, Bogdan A.; Zhou, Maggie Y.; Bradic, Martina; Torres, Ileana A.; Oladipo, Eniola; New, Christin; Kenney, Deborah E.; Avedian, Raffi S.; Steffner, Robert J.; Binkley, Michael S.; Mohler, David G.; Tap, William D.; D'Angelo, Sandra P.; van de Rijn, Matt; Ganjoo, Kristen N.; Bui, Nam Q.; Charville, Gregory W.; Newman, Aaron M.; Moding, Everett J. 分享 收藏
Diversity of intratumoral regulatory T cells in B-cell non-Hodgkin lymphoma Spasevska, Ivana; Sharma, Ankush; Steen, Chloe B.; Josefsson, Sarah E.; Blaker, Yngvild N.; Kolstad, Arne; Rustad, Even H.; Meyer, Saskia; Isaksen, Kathrine; Chellappa, Stalin; Kushekhar, Kushi; Beiske, Klaus; Forsund, Mette S.; Spetalen, Signe; Holte, Harald; Ostenstad, Bjorn; Brodtkorb, Marianne; Kimby, Eva; Olweus, Johanna; Tasken, Kjetil; Newman, Aaron M.; Lorenz, Susanne; Smeland, Erlend B.; Alizadeh, Ash A.; Huse, Kanutte; Myklebust, June H. 分享 收藏
CD4 T cells and toxicity from immune checkpoint blockade CD4 T细胞和免疫检查点阻断的毒性 Earland, Noah; Zhang, Wubing; Usmani, Abul; Nene, Aishwarya; Bacchiocchi, Antonella; Chen, David Y.; Sznol, Mario; Halaban, Ruth; Chaudhuri, Aadel A.; Newman, Aaron M. 分享 收藏
Association between circulating CD4 memory T cell levels and severe immune-related adverse events in melanoma patients treated with immune checkpoint blockade Usmani, Abul; Earland, Noah; Zhang, Wubing; Harris, Peter K.; Bacchiocchi, Antonietta; Nene, Aishwarya; Chen, David Y.; Sznol, Mario; Halaban, Ruth; Newman, Aaron M.; Chaudhuri, Aadel A. 分享 收藏
Identification and validation of sarcoma cellular ecosystems associated with prognosis and predictive of immunotherapy response Subramanian, Ajay; Nemat-Gorgani, Neda; Ellis-Caleo, Timothy J.; van IJzendoorn, David G. P.; Sears, Timothy J.; Somani, Anish; Luca, Bogdan A.; Zhou, Maggie Y.; Bradic, Martina; Torres, Ileana A.; Oladipo, Eniola; New, Christin; Kenney, Deborah E.; Avedian, Raffi S.; Steffner, Robert J.; Binkley, Michael S.; Mohler, David G.; Tap, William D.; D'Angelo, Sandra P.; van de Rijn, Matt; Ganjoo, Kristen N.; Bui, Nam Q.; Charville, Gregory W.; Newman, Aaron M.; Moding, Everett J. 分享 收藏
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Identification of a minority population of LMO2+ breast cancer cells that integrate into the vasculature and initiate metastasis Sikandar, Shaheen S.; Gulati, Gunsagar S.; Antony, Jane; Fetter, Isobel; Kuo, Angera H.; Ho, William Hai Dang; Haro-Acosta, Veronica; Das, Soumyashree; Steen, Chloe B.; Pereira, Thiago Almeida; Qian, Dalong; Beachy, Philip A.; Dirbas, Fredrick; Red-Horse, Kristy; Rabbitts, Terence H.; Thiery, Jean Paul; Newman, Aaron M.; Clarke, Michael F. 分享 收藏
Integrative molecular and clinical profiling of acral melanoma links focal amplification of 22q11.21 to metastasis (vol 13, 898, 2022) Farshidfar, Farshad; Rhrissorrakrai, Kahn; Levovitz, Chaya; Peng, Cong; Knight, James; Bacchiocchi, Antonella; Su, Juan; Yin, Mingzhu; Sznol, Mario; Ariyan, Stephan; Clune, James; Olino, Kelly; Parida, Laxmi; Nikolaus, Joerg; Zhang, Meiling; Zhao, Shuang; Wang, Yan; Huang, Gang; Wan, Miaojian; Li, Xianan; Cao, Jian; Yan, Qin; Chen, Xiang; Newman, Aaron M.; Halaban, Ruth 分享 收藏
Inferring gene expression from cell-free DNA fragmentation profiles 从无细胞DNA片段谱推断基因表达 Esfahani, Mohammad Shahrokh; Hamilton, Emily G.; Mehrmohamadi, Mahya; Nabet, Barzin Y.; Alig, Stefan K.; King, Daniel A.; Steen, Chloe B.; Macaulay, Charles W.; Schultz, Andre; Nesselbush, Monica C.; Soo, Joanne; Schroers-Martin, Joseph G.; Chen, Binbin; Binkley, Michael S.; Stehr, Henning; Chabon, Jacob J.; Sworder, Brian J.; Hui, Angela B-Y; Frank, Matthew J.; Moding, Everett J.; Liu, Chih Long; Newman, Aaron M.; Isbell, James M.; Rudin, Charles M.; Li, Bob T.; Kurtz, David M.; Diehn, Maximilian; Alizadeh, Ash A. 分享 收藏
Integrative molecular and clinical profiling of acral melanoma links focal amplification of 22q11.21 to metastasis Farshidfar, Farshad; Rhrissorrakrai, Kahn; Levovitz, Chaya; Peng, Cong; Knight, James; Bacchiocchi, Antonella; Su, Juan; Yin, Mingzhu; Sznol, Mario; Ariyan, Stephan; Clune, James; Olino, Kelly; Parida, Laxmi; Nikolaus, Joerg; Zhang, Meiling; Zhao, Shuang; Wang, Yan; Huang, Gang; Wan, Miaojian; Li, Xianan; Cao, Jian; Yan, Qin; Chen, Xiang; Newman, Aaron M.; Halaban, Ruth 分享 收藏
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