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收藏Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics通过单细胞和空间转录组学揭示的结直肠癌中空间定义的多细胞功能单元
Avraham-Davidi, Inbal; Mages, Simon; Klughammer, Johanna; Moriel, Noa; Imada, Shinya; Hofree, Matan; Murray, Evan; Chen, Jonathan; Pelka, Karin; Mehta, Arnav; Boland, Genevieve M.; Delorey, Toni; Caplan, Leah; Dionne, Danielle; Strasser, Robert; Lalakova, Jana; Niesnerova, Anezka; Xu, Hao; Rouault, Morgane; Tirosh, Itay; Nir, Hacohen; Chen, Fei; Yilmaz, Omer; Roper, Jatin; Rozenblatt-Rosen, Orit; Nitzan, Mor; Regev, Aviv
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收藏A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features跨临床病理特征的转移性乳腺癌活检的多模态单细胞和空间表达图
Klughammer, Johanna; Abravanel, Daniel L.; Segerstolpe, Asa; Blosser, Timothy R.; Goltsev, Yury; Cui, Yi; Goodwin, Daniel R.; Sinha, Anubhav; Ashenberg, Orr; Slyper, Michal; Vigneau, Sebastien; Jane-Valbuena, Judit; Alon, Shahar; Caraccio, Chiara; Chen, Judy; Cohen, Ofir; Cullen, Nicole; DelloStritto, Laura K.; Dionne, Danielle; Files, Janet; Frangieh, Allison; Helvie, Karla; Hughes, Melissa E.; Inga, Stephanie; Kanodia, Abhay; Lako, Ana; MacKichan, Colin; Mages, Simon; Moriel, Noa; Murray, Evan; Napolitano, Sara; Nguyen, Kyleen; Nitzan, Mor; Ortiz, Rebecca; Patel, Miraj; Pfaff, Kathleen L.; Porter, Caroline B. M.; Rotem, Asaf; Strauss, Sarah; Strasser, Robert; Thorner, Aaron R.; Turner, Madison; Wakiro, Isaac; Waldman, Julia; Wu, Jingyi; Zanudo, Jorge Gomez Tejeda; Zhang, Diane; Lin, Nancy U.; Tolaney, Sara M.; Winer, Eric P.; Boyden, Edward S.; Chen, Fei; Nolan, Garry P.; Rodig, Scott J.; Zhuang, Xiaowei; Rozenblatt-Rosen, Orit; Johnson, Bruce E.; Regev, Aviv; Wagle, Nikhil
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收藏Emergence of division of labor in tissues through cell interactions and spatial cues通过细胞相互作用和空间线索出现组织分工
Adler, Miri; Moriel, Noa; Goeva, Aleksandrina; Avraham-Davidi, Inbal; Mages, Simon; Adams, Taylor S.; Kaminski, Naftali; Macosko, Evan Z.; Regev, Aviv; Medzhitov, Ruslan; Nitzan, Mor
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收藏TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics
Mages, Simon; Moriel, Noa; Avraham-Davidi, Inbal; Murray, Evan; Watter, Jan; Chen, Fei; Rozenblatt-Rosen, Orit; Klughammer, Johanna; Regev, Aviv; Nitzan, Mor
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收藏Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram深度学习和空间分辨的单细胞转录组与七巧板的比对
Biancalani, Tommaso; Scalia, Gabriele; Buffoni, Lorenzo; Avasthi, Raghav; Lu, Ziqing; Sanger, Aman; Tokcan, Neriman; Vanderburg, Charles R.; Segerstolpe, Asa; Zhang, Meng; Avraham-Davidi, Inbal; Vickovic, Sanja; Nitzan, Mor; Ma, Sai; Subramanian, Ayshwarya; Lipinski, Michal; Buenrostro, Jason; Brown, Nik Bear; Fanelli, Duccio; Zhuang, Xiaowei; Macosko, Evan Z.; Regev, Aviv
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收藏ChIP-seq of plasma cell-free nucleosomes identifies gene expression programs of the cells of origin (Jan, 10.1038/s41587-020-00775-6, 2021)
Sadeh, Ronen; Sharkia, Israa; Fialkoff, Gavriel; Rahat, Ayelet; Gutin, Jenia; Chappleboim, Alon; Nitzan, Mor; Fox-Fisher, Ilana; Neiman, Daniel; Meler, Guy; Kamari, Zahala; Yaish, Dayana; Peretz, Tamar; Hubert, Ayala; Cohen, Jonathan E.; Salah, Azzam; Temper, Mark; Grinshpun, Albert; Maoz, Myriam; Abu-Gazala, Samir; Ben Ya'acov, Ami; Shteyer, Eyal; Safadi, Rifaat; Kaplan, Tommy; Shemer, Ruth; Planer, David; Galun, Eithan; Glaser, Benjamin; Zick, Aviad; Dor, Yuval; Friedman, Nir
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收藏ChIP-seq of plasma cell-free nucleosomes identifies gene expression programs of the cells of origin (vol 71, pg 515, 2021)
Sadeh, Ronen; Sharkia, Israa; Fialkoff, Gavriel; Rahat, Ayelet; Gutin, Jenia; Chappleboim, Alon; Nitzan, Mor; Fox-Fisher, Ilana; Neiman, Daniel; Meler, Guy; Kamari, Zahala; Yaish, Dayana; Peretz, Tamar; Hubert, Ayala; Cohen, Jonathan E.; Salah, Azzam; Temper, Mark; Grinshpun, Albert; Maoz, Myriam; Abu-Gazala, Samir; Ben Ya'acov, Ami; Shteyer, Eyal; Safadi, Rifaat; Kaplan, Tommy; Shemer, Ruth; Planer, David; Galun, Eithan; Glaser, Benjamin; Zick, Aviad; Dor, Yuval; Friedman, Nir
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收藏ChIP-seq of plasma cell-free nucleosomes identifies gene expression programs of the cells of origin血浆无细胞核小体的chip-seq识别起源细胞的基因表达程序
Sadeh, Ronen; Sharkia, Israa; Fialkoff, Gavriel; Rahat, Ayelet; Gutin, Jenia; Chappleboim, Alon; Nitzan, Mor; Fox-Fisher, Ilana; Neiman, Daniel; Meler, Guy; Kamari, Zahala; Yaish, Dayana; Peretz, Tamar; Hubert, Ayala; Cohen, Jonathan E.; Salah, Azzam; Temper, Mark; Grinshpun, Albert; Maoz, Myriam; Abu-Gazala, Samir; Ben Ya'acov, Ami; Shteyer, Eyal; Safadi, Rifaat; Kaplan, Tommy; Shemer, Ruth; Planer, David; Galun, Eithan; Glaser, Benjamin; Zick, Aviad; Dor, Yuval; Friedman, Nir
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收藏Selective flexible packaging pathways of the segmented genome of influenza A virus
Haralampiev, Ivan; Prisner, Simon; Nitzan, Mor; Schade, Matthias; Jolmes, Fabian; Schreiber, Max; Loidolt-Kruger, Maria; Jongen, Kalle; Chamiolo, Jasmine; Nilson, Niklaas; Winter, Franziska; Friedman, Nir; Seitz, Oliver; Wolff, Thorsten; Herrmann, Andreas
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收藏Single-cell analysis of germinal-center B cells informs on lymphoma cell of origin and outcome
Holmes, Antony B.; Corinaldesi, Clarissa; Shen, Qiong; Kumar, Rahul; Compagno, Nicolo; Wang, Zhong; Nitzan, Mor; Grunstein, Eli; Pasqualucci, Laura; Dalla-Favera, Riccardo; Basso, Katia
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